RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 CASP14P31944 242 aa13.42□□□□□ -0.26
PDPN-210ENST00000513143 PBX3P40426 434 aa13.42□□□□□ -0.26
PDPN-210ENST00000513143 BRCC3P46736 316 aa13.42□□□□□ -0.26
PDPN-210ENST00000513143 FXR1P51114 621 aaKnown RBP eCLIP13.42□□□□□ -0.26
PDPN-210ENST00000513143 JAM2P57087 298 aa13.42□□□□□ -0.26
PDPN-210ENST00000513143 MLLT1Q03111 559 aaPredicted RBP13.42□□□□□ -0.26
PDPN-210ENST00000513143 SOWAHAQ2M3V2 549 aa13.42□□□□□ -0.26
PDPN-210ENST00000513143 FAM109BQ6ICB4 259 aaPredicted RBP13.42□□□□□ -0.26
PDPN-210ENST00000513143 DPH6Q7L8W6 267 aa13.42□□□□□ -0.26
PDPN-210ENST00000513143 CACNA2D4Q7Z3S7 1137 aa13.42□□□□□ -0.26
PDPN-210ENST00000513143 TOP6BLQ8N6T0 577 aa13.42□□□□□ -0.26
PDPN-210ENST00000513143 UBR7Q8N806 425 aa13.42□□□□□ -0.26
PDPN-210ENST00000513143 COLGALT1Q8NBJ5 622 aa13.42□□□□□ -0.26
PDPN-210ENST00000513143 SPC24Q8NBT2 197 aa13.42□□□□□ -0.26
PDPN-210ENST00000513143 HASPINQ8TF76 798 aa13.42□□□□□ -0.26
PDPN-210ENST00000513143 CPLX3Q8WVH0 158 aa13.42□□□□□ -0.26
PDPN-210ENST00000513143 BAP1Q92560 729 aa13.42□□□□□ -0.26
PDPN-210ENST00000513143 SUSD3Q96L08 255 aa13.42□□□□□ -0.26
PDPN-210ENST00000513143 SENP8Q96LD8 212 aa13.42□□□□□ -0.26
PDPN-210ENST00000513143 ZNF558Q96NG5 402 aa13.42□□□□□ -0.26
PDPN-210ENST00000513143 MMS19Q96T76 1030 aa13.42□□□□□ -0.26
PDPN-210ENST00000513143 ARID3AQ99856 593 aa13.42□□□□□ -0.26
PDPN-210ENST00000513143 GPR88Q9GZN0 384 aa13.42□□□□□ -0.26
PDPN-210ENST00000513143 SDCBP2Q9H190 292 aa13.42□□□□□ -0.26
PDPN-210ENST00000513143 ADAM28Q9UKQ2 775 aa13.42□□□□□ -0.26
PDPN-210ENST00000513143 MYO6Q9UM54 1294 aa13.42□□□□□ -0.26
PDPN-210ENST00000513143 VWA8A3KMH1 1905 aa13.42□□□□□ -0.26
PDPN-210ENST00000513143 TSC2P49815 1807 aa13.42□□□□□ -0.26
PDPN-210ENST00000513143 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.41□□□□□ -0.26
PDPN-210ENST00000513143 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.41□□□□□ -0.26
PDPN-210ENST00000513143 LCHNA4D1U4 455 aa13.41□□□□□ -0.26
PDPN-210ENST00000513143 NT5C1B-RDH14C9J2C7 533 aa13.41□□□□□ -0.26
PDPN-210ENST00000513143 CYB561D2O14569 222 aa13.41□□□□□ -0.26
PDPN-210ENST00000513143 TRAPPC3O43617 180 aa13.41□□□□□ -0.26
PDPN-210ENST00000513143 HUS1O60921 280 aa13.41□□□□□ -0.26
PDPN-210ENST00000513143 TACC1O75410 805 aa13.41□□□□□ -0.26
PDPN-210ENST00000513143 EFEMP2O95967 443 aa13.41□□□□□ -0.26
PDPN-210ENST00000513143 CYP11A1P05108 521 aa13.41□□□□□ -0.26
PDPN-210ENST00000513143 TPM1P09493 284 aa13.41□□□□□ -0.26
PDPN-210ENST00000513143 WEE2P0C1S8 567 aa13.41□□□□□ -0.26
PDPN-210ENST00000513143 ACO1P21399 889 aaKnown RBP13.41□□□□□ -0.26
PDPN-210ENST00000513143 RABGGTBP53611 331 aa13.41□□□□□ -0.26
PDPN-210ENST00000513143 CDH8P55286 799 aa13.41□□□□□ -0.26
PDPN-210ENST00000513143 ZBED6P86452 979 aa13.41□□□□□ -0.26
PDPN-210ENST00000513143 RAPGEF1Q13905 1077 aa13.41□□□□□ -0.26
PDPN-210ENST00000513143 DRAP1Q14919 205 aaPredicted RBP13.41□□□□□ -0.26
PDPN-210ENST00000513143 ARHGAP44Q17R89 818 aa13.41□□□□□ -0.26
PDPN-210ENST00000513143 DSTYKQ6XUX3 929 aa13.41□□□□□ -0.26
PDPN-210ENST00000513143 SCARA5Q6ZMJ2 495 aa13.41□□□□□ -0.26
PDPN-210ENST00000513143 TMEM173Q86WV6 379 aaPredicted RBP13.41□□□□□ -0.26
PDPN-210ENST00000513143 TDHQ8IZJ6 230 aa13.41□□□□□ -0.26
PDPN-210ENST00000513143 SLC39A11Q8N1S5 342 aa13.41□□□□□ -0.26
PDPN-210ENST00000513143 APPL2Q8NEU8 664 aa13.41□□□□□ -0.26
PDPN-210ENST00000513143 ZNF397Q8NF99 534 aaPredicted RBP13.41□□□□□ -0.26
PDPN-210ENST00000513143 SHC3Q92529 594 aa13.41□□□□□ -0.26
PDPN-210ENST00000513143 IGSF21Q96ID5 467 aa13.41□□□□□ -0.26
PDPN-210ENST00000513143 PRO3102Q9H379 93 aa13.41□□□□□ -0.26
PDPN-210ENST00000513143 SMYD3Q9H7B4 428 aa13.41□□□□□ -0.26
PDPN-210ENST00000513143 AAASQ9NRG9 546 aa13.41□□□□□ -0.26
PDPN-210ENST00000513143 L1RE1Q9UN81 338 aa13.41□□□□□ -0.26
PDPN-210ENST00000513143 LUC7L2Q9Y383 392 aaKnown RBP13.41□□□□□ -0.26
PDPN-210ENST00000513143 PCDHA11Q9Y5I1 949 aa13.41□□□□□ -0.26
PDPN-210ENST00000513143 RANBP2P49792 3224 aaKnown RBP13.41□□□□□ -0.26
PDPN-210ENST00000513143 ARHGEF37A1IGU5 675 aa13.4□□□□□ -0.26
PDPN-210ENST00000513143 LINC01553A4QN01 128 aa13.4□□□□□ -0.26
PDPN-210ENST00000513143 AKR1B15C9JRZ8 316 aaPredicted RBP13.4□□□□□ -0.26
PDPN-210ENST00000513143 F8VZ95 297 aa13.4□□□□□ -0.26
PDPN-210ENST00000513143 I3L4J1 428 aa13.4□□□□□ -0.26
PDPN-210ENST00000513143 FOXN3O00409 490 aaPredicted RBP13.4□□□□□ -0.26
PDPN-210ENST00000513143 KRT9P35527 623 aa13.4□□□□□ -0.26
PDPN-210ENST00000513143 RAP1GAPP47736 663 aa13.4□□□□□ -0.26
PDPN-210ENST00000513143 YWHAEP62258 255 aaKnown RBP13.4□□□□□ -0.26
PDPN-210ENST00000513143 INCA1Q0VD86 236 aa13.4□□□□□ -0.26
PDPN-210ENST00000513143 ELAVL2Q12926 359 aaKnown RBP13.4□□□□□ -0.26
PDPN-210ENST00000513143 ARID5BQ14865 1188 aa13.4□□□□□ -0.26
PDPN-210ENST00000513143 FUT10Q6P4F1 479 aa13.4□□□□□ -0.26
PDPN-210ENST00000513143 PDXDC1Q6P996 788 aa13.4□□□□□ -0.26
PDPN-210ENST00000513143 PDCL2Q8N4E4 241 aa13.4□□□□□ -0.26
PDPN-210ENST00000513143 TTC39CQ8N584 583 aa13.4□□□□□ -0.26
PDPN-210ENST00000513143 SPATA18Q8TC71 538 aa13.4□□□□□ -0.26
PDPN-210ENST00000513143 BCL7CQ8WUZ0 217 aaPredicted RBP13.4□□□□□ -0.26
PDPN-210ENST00000513143 SPAG5Q96R06 1193 aa13.4□□□□□ -0.26
PDPN-210ENST00000513143 GPR62Q9BZJ7 368 aa13.4□□□□□ -0.26
PDPN-210ENST00000513143 CISHQ9NSE2 258 aa13.4□□□□□ -0.26
PDPN-210ENST00000513143 SPG21Q9NZD8 308 aa13.4□□□□□ -0.26
PDPN-210ENST00000513143 PCDHB8Q9UN66 801 aa13.4□□□□□ -0.26
PDPN-210ENST00000513143 CNTN6Q9UQ52 1028 aa13.4□□□□□ -0.26
PDPN-210ENST00000513143 PCDHB12Q9Y5F1 795 aa13.4□□□□□ -0.26
PDPN-210ENST00000513143 SF3B1O75533 1304 aaKnown RBP eCLIP13.4□□□□□ -0.26
PDPN-210ENST00000513143 LRRC53A6NM62 1247 aa13.39□□□□□ -0.27
PDPN-210ENST00000513143 GOLGA6L6A8MZA4 724 aa13.39□□□□□ -0.27
PDPN-210ENST00000513143 SYN3O14994 580 aa13.39□□□□□ -0.27
PDPN-210ENST00000513143 MFAP3LO75121 409 aa13.39□□□□□ -0.27
PDPN-210ENST00000513143 CILPO75339 1184 aa13.39□□□□□ -0.27
PDPN-210ENST00000513143 ODC1P11926 461 aa13.39□□□□□ -0.27
PDPN-210ENST00000513143 MYOGP15173 224 aa13.39□□□□□ -0.27
PDPN-210ENST00000513143 TYMPP19971 482 aa13.39□□□□□ -0.27
PDPN-210ENST00000513143 WARSP23381 471 aaKnown RBP13.39□□□□□ -0.27
PDPN-210ENST00000513143 SOX5P35711 763 aa13.39□□□□□ -0.27
PDPN-210ENST00000513143 PPM1AP35813 382 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms