RNA–Protein interactions for RNA: ENST00000512725.5

DDR1-269, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 539 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-269ENST00000512725 DSTYKQ6XUX3 929 aa17.41■□□□□ 0.38
DDR1-269ENST00000512725 SYNPOQ8N3V7 929 aa17.41■□□□□ 0.38
DDR1-269ENST00000512725 TCEAL3Q969E4 200 aa17.41■□□□□ 0.38
DDR1-269ENST00000512725 LRRC3BQ96PB8 259 aa17.41■□□□□ 0.38
DDR1-269ENST00000512725 TMEM209Q96SK2 561 aa17.41■□□□□ 0.38
DDR1-269ENST00000512725 LSM14BQ9BX40 385 aaKnown RBP17.41■□□□□ 0.38
DDR1-269ENST00000512725 KMT5AQ9NQR1 393 aa17.41■□□□□ 0.38
DDR1-269ENST00000512725 THG1LQ9NWX6 298 aaKnown RBP17.41■□□□□ 0.38
DDR1-269ENST00000512725 ANKFY1Q9P2R3 1169 aa17.41■□□□□ 0.38
DDR1-269ENST00000512725 TUBGCP4Q9UGJ1 667 aa17.41■□□□□ 0.38
DDR1-269ENST00000512725 ZMIZ1Q9ULJ6 1067 aa17.41■□□□□ 0.38
DDR1-269ENST00000512725 SPAG17Q6Q759 2223 aa17.41■□□□□ 0.38
DDR1-269ENST00000512725 ATG2BQ96BY7 2078 aa17.41■□□□□ 0.38
DDR1-269ENST00000512725 MCF2P10911 925 aa17.4■□□□□ 0.38
DDR1-269ENST00000512725 HOXA6P31267 233 aa17.4■□□□□ 0.38
DDR1-269ENST00000512725 RAP1GAPP47736 663 aa17.4■□□□□ 0.38
DDR1-269ENST00000512725 NPTX2P47972 431 aa17.4■□□□□ 0.38
DDR1-269ENST00000512725 CYP4F8P98187 520 aa17.4■□□□□ 0.38
DDR1-269ENST00000512725 SPAG1Q07617 926 aa17.4■□□□□ 0.38
DDR1-269ENST00000512725 DMP1Q13316 513 aaPredicted RBP17.4■□□□□ 0.38
DDR1-269ENST00000512725 ITPRIPL2Q3MIP1 535 aa17.4■□□□□ 0.38
DDR1-269ENST00000512725 HAUS3Q68CZ6 603 aa17.4■□□□□ 0.38
DDR1-269ENST00000512725 MPZL3Q6UWV2 235 aa17.4■□□□□ 0.38
DDR1-269ENST00000512725 BPIFB1Q8TDL5 484 aa17.4■□□□□ 0.38
DDR1-269ENST00000512725 ZBTB45Q96K62 511 aaPredicted RBP17.4■□□□□ 0.38
DDR1-269ENST00000512725 EDEM2Q9BV94 578 aa17.4■□□□□ 0.38
DDR1-269ENST00000512725 LRRC3Q9BY71 257 aa17.4■□□□□ 0.38
DDR1-269ENST00000512725 DNAJC25Q9H1X3 360 aa17.4■□□□□ 0.38
DDR1-269ENST00000512725 CRISPLD1Q9H336 500 aa17.4■□□□□ 0.38
DDR1-269ENST00000512725 POLR3BQ9NW08 1133 aaPredicted RBP17.4■□□□□ 0.38
DDR1-269ENST00000512725 DAXXQ9UER7 740 aaPredicted RBP17.4■□□□□ 0.38
DDR1-269ENST00000512725 KIAA1024Q9UPX6 916 aa17.4■□□□□ 0.38
DDR1-269ENST00000512725 GIPC1O14908 333 aa17.39■□□□□ 0.37
DDR1-269ENST00000512725 ATG13O75143 517 aa17.39■□□□□ 0.37
DDR1-269ENST00000512725 OR52Z1P0C646 297 aa17.39■□□□□ 0.37
DDR1-269ENST00000512725 SPINK2P20155 84 aa17.39■□□□□ 0.37
DDR1-269ENST00000512725 PLCB2Q00722 1185 aa17.39■□□□□ 0.37
DDR1-269ENST00000512725 GUCY1B3Q02153 619 aa17.39■□□□□ 0.37
DDR1-269ENST00000512725 CREB5Q02930 508 aa17.39■□□□□ 0.37
DDR1-269ENST00000512725 GRSF1Q12849 480 aaKnown RBP eCLIP17.39■□□□□ 0.37
DDR1-269ENST00000512725 PTPAQ15257 358 aa17.39■□□□□ 0.37
DDR1-269ENST00000512725 TAF12Q16514 161 aa17.39■□□□□ 0.37
DDR1-269ENST00000512725 ECM1Q16610 540 aa17.39■□□□□ 0.37
DDR1-269ENST00000512725 GAREM2Q75VX8 874 aa17.39■□□□□ 0.37
DDR1-269ENST00000512725 DNAJB7Q7Z6W7 309 aaPredicted RBP17.39■□□□□ 0.37
DDR1-269ENST00000512725 ATAD1Q8NBU5 361 aa17.39■□□□□ 0.37
DDR1-269ENST00000512725 GCNAQ96QF7 691 aa17.39■□□□□ 0.37
DDR1-269ENST00000512725 HHIPQ96QV1 700 aa17.39■□□□□ 0.37
DDR1-269ENST00000512725 SMG9Q9H0W8 520 aaKnown RBP17.39■□□□□ 0.37
DDR1-269ENST00000512725 TMEM134Q9H6X4 195 aa17.39■□□□□ 0.37
DDR1-269ENST00000512725 PTPRHQ9HD43 1115 aa17.39■□□□□ 0.37
DDR1-269ENST00000512725 VPS45Q9NRW7 570 aa17.39■□□□□ 0.37
DDR1-269ENST00000512725 PCDHGA5Q9Y5G8 931 aa17.39■□□□□ 0.37
DDR1-269ENST00000512725 C4orf47A7E2U8 309 aa17.38■□□□□ 0.37
DDR1-269ENST00000512725 HIP1RO75146 1068 aa17.38■□□□□ 0.37
DDR1-269ENST00000512725 VNN2O95498 520 aa17.38■□□□□ 0.37
DDR1-269ENST00000512725 PRAMEF12O95522 483 aa17.38■□□□□ 0.37
DDR1-269ENST00000512725 HOXB3P14651 431 aaPredicted RBP17.38■□□□□ 0.37
DDR1-269ENST00000512725 ZNF252P-AS1Q0IIN9 211 aa17.38■□□□□ 0.37
DDR1-269ENST00000512725 ELF2Q15723 593 aa17.38■□□□□ 0.37
DDR1-269ENST00000512725 ARMCX5Q6P1M9 558 aa17.38■□□□□ 0.37
DDR1-269ENST00000512725 TAS1R3Q7RTX0 852 aa17.38■□□□□ 0.37
DDR1-269ENST00000512725 ITIH5Q86UX2 942 aa17.38■□□□□ 0.37
DDR1-269ENST00000512725 KIF12Q96FN5 646 aa17.38■□□□□ 0.37
DDR1-269ENST00000512725 SEPT5Q99719 369 aaPredicted RBP17.38■□□□□ 0.37
DDR1-269ENST00000512725 GKN1Q9NS71 199 aa17.38■□□□□ 0.37
DDR1-269ENST00000512725 DDX19AQ9NUU7 478 aaKnown RBP17.38■□□□□ 0.37
DDR1-269ENST00000512725 ASB3Q9Y575 518 aa17.38■□□□□ 0.37
DDR1-269ENST00000512725 BAHCC1Q9P281 2608 aa17.37■□□□□ 0.37
DDR1-269ENST00000512725 OR6C75A6NL08 312 aa17.37■□□□□ 0.37
DDR1-269ENST00000512725 SLC16A4O15374 487 aa17.37■□□□□ 0.37
DDR1-269ENST00000512725 RNF40O75150 1001 aa17.37■□□□□ 0.37
DDR1-269ENST00000512725 FGF19O95750 216 aa17.37■□□□□ 0.37
DDR1-269ENST00000512725 GBP1P32455 592 aa17.37■□□□□ 0.37
DDR1-269ENST00000512725 MCM2P49736 904 aa17.37■□□□□ 0.37
DDR1-269ENST00000512725 CACNB1Q02641 598 aaPredicted RBP17.37■□□□□ 0.37
DDR1-269ENST00000512725 STRN3Q13033 797 aa17.37■□□□□ 0.37
DDR1-269ENST00000512725 GPR17Q13304 367 aa17.37■□□□□ 0.37
DDR1-269ENST00000512725 NOLC1Q14978 699 aaKnown RBP eCLIP17.37■□□□□ 0.37
DDR1-269ENST00000512725 SAFBQ15424 915 aaKnown RBP eCLIP17.37■□□□□ 0.37
DDR1-269ENST00000512725 SLC10A6Q3KNW5 377 aa17.37■□□□□ 0.37
DDR1-269ENST00000512725 PLA2G2CQ5R387 149 aa17.37■□□□□ 0.37
DDR1-269ENST00000512725 DAB2IPQ5VWQ8 1189 aa17.37■□□□□ 0.37
DDR1-269ENST00000512725 ERICH6BQ5W0A0 696 aa17.37■□□□□ 0.37
DDR1-269ENST00000512725 TTC9BQ8N6N2 239 aa17.37■□□□□ 0.37
DDR1-269ENST00000512725 TTC16Q8NEE8 873 aa17.37■□□□□ 0.37
DDR1-269ENST00000512725 BEST2Q8NFU1 509 aa17.37■□□□□ 0.37
DDR1-269ENST00000512725 PSMG2Q969U7 264 aa17.37■□□□□ 0.37
DDR1-269ENST00000512725 LPIN3Q9BQK8 851 aa17.37■□□□□ 0.37
DDR1-269ENST00000512725 MKNK1Q9BUB5 465 aa17.37■□□□□ 0.37
DDR1-269ENST00000512725 OXCT2Q9BYC2 517 aaPredicted RBP17.37■□□□□ 0.37
DDR1-269ENST00000512725 OBP2AQ9NY56 170 aa17.37■□□□□ 0.37
DDR1-269ENST00000512725 LAMA1P25391 3075 aa17.37■□□□□ 0.37
DDR1-269ENST00000512725 NUP210Q8TEM1 1887 aaPredicted RBP17.37■□□□□ 0.37
DDR1-269ENST00000512725 MTMR11A4FU01 709 aa17.36■□□□□ 0.37
DDR1-269ENST00000512725 SFI1A8K8P3 1242 aa17.36■□□□□ 0.37
DDR1-269ENST00000512725 M0QZQ0 153 aa17.36■□□□□ 0.37
DDR1-269ENST00000512725 DCLK1O15075 740 aa17.36■□□□□ 0.37
DDR1-269ENST00000512725 MEFVO15553 781 aaPredicted RBP17.36■□□□□ 0.37
DDR1-269ENST00000512725 JAK2O60674 1132 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms