RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 ZNF131P52739 623 aa13.65□□□□□ -0.22
VEGFA-216ENST00000512683 LILRA4P59901 499 aa13.65□□□□□ -0.22
VEGFA-216ENST00000512683 PLCB2Q00722 1185 aa13.65□□□□□ -0.22
VEGFA-216ENST00000512683 LRRC32Q14392 662 aa13.65□□□□□ -0.22
VEGFA-216ENST00000512683 ZRSR1Q15695 479 aaKnown RBP13.65□□□□□ -0.22
VEGFA-216ENST00000512683 ARSHQ5FYA8 562 aa13.65□□□□□ -0.22
VEGFA-216ENST00000512683 DGKKQ5KSL6 1271 aa13.65□□□□□ -0.22
VEGFA-216ENST00000512683 OVOS1Q6IE37 1185 aa13.65□□□□□ -0.22
VEGFA-216ENST00000512683 CENPPQ6IPU0 288 aa13.65□□□□□ -0.22
VEGFA-216ENST00000512683 HS6ST3Q8IZP7 471 aa13.65□□□□□ -0.22
VEGFA-216ENST00000512683 SPEM1Q8N4L4 309 aa13.65□□□□□ -0.22
VEGFA-216ENST00000512683 DCLK2Q8N568 766 aa13.65□□□□□ -0.22
VEGFA-216ENST00000512683 CSGALNACT1Q8TDX6 532 aa13.65□□□□□ -0.22
VEGFA-216ENST00000512683 BICD1Q96G01 975 aa13.65□□□□□ -0.22
VEGFA-216ENST00000512683 CALML4Q96GE6 196 aa13.65□□□□□ -0.22
VEGFA-216ENST00000512683 ZSWIM3Q96MP5 696 aa13.65□□□□□ -0.22
VEGFA-216ENST00000512683 ASB7Q9H672 318 aa13.65□□□□□ -0.22
VEGFA-216ENST00000512683 PARVGQ9HBI0 331 aa13.65□□□□□ -0.22
VEGFA-216ENST00000512683 GMEB2Q9UKD1 530 aa13.65□□□□□ -0.22
VEGFA-216ENST00000512683 DSEQ9UL01 958 aa13.65□□□□□ -0.22
VEGFA-216ENST00000512683 YIPF1Q9Y548 306 aa13.65□□□□□ -0.22
VEGFA-216ENST00000512683 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.65□□□□□ -0.22
VEGFA-216ENST00000512683 PIAS3Q9Y6X2 628 aa13.65□□□□□ -0.22
VEGFA-216ENST00000512683 DOCK6Q96HP0 2047 aa13.64□□□□□ -0.23
VEGFA-216ENST00000512683 F5P12259 2224 aa13.64□□□□□ -0.23
VEGFA-216ENST00000512683 CACNA1IQ9P0X4 2223 aa13.64□□□□□ -0.23
VEGFA-216ENST00000512683 VWA3AA6NCI4 1184 aa13.64□□□□□ -0.23
VEGFA-216ENST00000512683 LACTBL1A8MY62 500 aa13.64□□□□□ -0.23
VEGFA-216ENST00000512683 ARNTLO00327 626 aa13.64□□□□□ -0.23
VEGFA-216ENST00000512683 CYP11A1P05108 521 aa13.64□□□□□ -0.23
VEGFA-216ENST00000512683 CHRNB1P11230 501 aa13.64□□□□□ -0.23
VEGFA-216ENST00000512683 TDGF1P13385 188 aa13.64□□□□□ -0.23
VEGFA-216ENST00000512683 UBA7P41226 1012 aa13.64□□□□□ -0.23
VEGFA-216ENST00000512683 DUSP4Q13115 394 aa13.64□□□□□ -0.23
VEGFA-216ENST00000512683 GRM2Q14416 872 aa13.64□□□□□ -0.23
VEGFA-216ENST00000512683 PTPAQ15257 358 aa13.64□□□□□ -0.23
VEGFA-216ENST00000512683 RSPO4Q2I0M5 234 aaPredicted RBP13.64□□□□□ -0.23
VEGFA-216ENST00000512683 ARHGAP29Q52LW3 1261 aa13.64□□□□□ -0.23
VEGFA-216ENST00000512683 SLFN12LQ6IEE8 588 aa13.64□□□□□ -0.23
VEGFA-216ENST00000512683 DNAJB7Q7Z6W7 309 aaPredicted RBP13.64□□□□□ -0.23
VEGFA-216ENST00000512683 RALGPS2Q86X27 583 aaPredicted RBP13.64□□□□□ -0.23
VEGFA-216ENST00000512683 SHKBP1Q8TBC3 707 aa13.64□□□□□ -0.23
VEGFA-216ENST00000512683 C2orf15Q8WU43 125 aaKnown RBP13.64□□□□□ -0.23
VEGFA-216ENST00000512683 PSMG2Q969U7 264 aa13.64□□□□□ -0.23
VEGFA-216ENST00000512683 TUBGCP4Q9UGJ1 667 aa13.64□□□□□ -0.23
VEGFA-216ENST00000512683 CEP250Q9BV73 2442 aa13.64□□□□□ -0.23
VEGFA-216ENST00000512683 MYH15Q9Y2K3 1946 aa13.63□□□□□ -0.23
VEGFA-216ENST00000512683 PIRO00625 290 aa13.63□□□□□ -0.23
VEGFA-216ENST00000512683 HNRNPDLO14979 420 aaKnown RBP13.63□□□□□ -0.23
VEGFA-216ENST00000512683 TRAK2O60296 914 aa13.63□□□□□ -0.23
VEGFA-216ENST00000512683 FAM189A1O60320 539 aa13.63□□□□□ -0.23
VEGFA-216ENST00000512683 RETP07949 1114 aa13.63□□□□□ -0.23
VEGFA-216ENST00000512683 ODC1P11926 461 aa13.63□□□□□ -0.23
VEGFA-216ENST00000512683 LONP1P36776 959 aaKnown RBP13.63□□□□□ -0.23
VEGFA-216ENST00000512683 VIPR2P41587 438 aa13.63□□□□□ -0.23
VEGFA-216ENST00000512683 GTF2BQ00403 316 aa13.63□□□□□ -0.23
VEGFA-216ENST00000512683 TEAD2Q15562 447 aa13.63□□□□□ -0.23
VEGFA-216ENST00000512683 ENOX2Q16206 610 aaKnown RBP13.63□□□□□ -0.23
VEGFA-216ENST00000512683 SEZ6Q53EL9 994 aa13.63□□□□□ -0.23
VEGFA-216ENST00000512683 ARHGAP15Q53QZ3 475 aa13.63□□□□□ -0.23
VEGFA-216ENST00000512683 LAIR1Q6GTX8 287 aa13.63□□□□□ -0.23
VEGFA-216ENST00000512683 NT5DC4Q86YG4 428 aa13.63□□□□□ -0.23
VEGFA-216ENST00000512683 TMC8Q8IU68 726 aa13.63□□□□□ -0.23
VEGFA-216ENST00000512683 ARID3BQ8IVW6 561 aaPredicted RBP13.63□□□□□ -0.23
VEGFA-216ENST00000512683 MYCT1Q8N699 235 aa13.63□□□□□ -0.23
VEGFA-216ENST00000512683 SENP8Q96LD8 212 aa13.63□□□□□ -0.23
VEGFA-216ENST00000512683 RTKNQ9BST9 563 aa13.63□□□□□ -0.23
VEGFA-216ENST00000512683 BACH2Q9BYV9 841 aa13.63□□□□□ -0.23
VEGFA-216ENST00000512683 HAPLN2Q9GZV7 340 aa13.63□□□□□ -0.23
VEGFA-216ENST00000512683 ST6GALNAC4Q9H4F1 302 aa13.63□□□□□ -0.23
VEGFA-216ENST00000512683 SLITRK6Q9H5Y7 841 aa13.63□□□□□ -0.23
VEGFA-216ENST00000512683 CPSF3Q9UKF6 684 aaKnown RBP13.63□□□□□ -0.23
VEGFA-216ENST00000512683 NDRG2Q9UN36 371 aaKnown RBP13.63□□□□□ -0.23
VEGFA-216ENST00000512683 C2CD2Q9Y426 696 aa13.63□□□□□ -0.23
VEGFA-216ENST00000512683 WDR87Q6ZQQ6 2873 aa13.63□□□□□ -0.23
VEGFA-216ENST00000512683 ANO9A1A5B4 782 aa13.62□□□□□ -0.23
VEGFA-216ENST00000512683 MYBPHLA2RUH7 354 aa13.62□□□□□ -0.23
VEGFA-216ENST00000512683 DPYSL4O14531 572 aa13.62□□□□□ -0.23
VEGFA-216ENST00000512683 FAM13AO94988 1023 aa13.62□□□□□ -0.23
VEGFA-216ENST00000512683 VNN2O95498 520 aa13.62□□□□□ -0.23
VEGFA-216ENST00000512683 KPNA1P52294 538 aaPredicted RBP13.62□□□□□ -0.23
VEGFA-216ENST00000512683 RAD51AP2Q09MP3 1159 aa13.62□□□□□ -0.23
VEGFA-216ENST00000512683 POSTNQ15063 836 aa13.62□□□□□ -0.23
VEGFA-216ENST00000512683 C9orf57Q5W0N0 161 aa13.62□□□□□ -0.23
VEGFA-216ENST00000512683 METTL23Q86XA0 190 aa13.62□□□□□ -0.23
VEGFA-216ENST00000512683 THEM5Q8N1Q8 247 aa13.62□□□□□ -0.23
VEGFA-216ENST00000512683 LRRC15Q8TF66 581 aa13.62□□□□□ -0.23
VEGFA-216ENST00000512683 PLIN2Q99541 437 aa13.62□□□□□ -0.23
VEGFA-216ENST00000512683 CCSER1Q9C0I3 900 aa13.62□□□□□ -0.23
VEGFA-216ENST00000512683 DNAJC25Q9H1X3 360 aa13.62□□□□□ -0.23
VEGFA-216ENST00000512683 TASP1Q9H6P5 420 aa13.62□□□□□ -0.23
VEGFA-216ENST00000512683 THG1LQ9NWX6 298 aaKnown RBP13.62□□□□□ -0.23
VEGFA-216ENST00000512683 TIMM13Q9Y5L4 95 aaPredicted RBP13.62□□□□□ -0.23
VEGFA-216ENST00000512683 STYXL1Q9Y6J8 313 aa13.62□□□□□ -0.23
VEGFA-216ENST00000512683 NCOR2Q9Y618 2525 aa13.61□□□□□ -0.23
VEGFA-216ENST00000512683 A0A1W2PRU2 124 aa13.61□□□□□ -0.23
VEGFA-216ENST00000512683 MTMR11A4FU01 709 aa13.61□□□□□ -0.23
VEGFA-216ENST00000512683 TGM1P22735 817 aa13.61□□□□□ -0.23
VEGFA-216ENST00000512683 CCNE1P24864 410 aa13.61□□□□□ -0.23
VEGFA-216ENST00000512683 DDX6P26196 483 aaKnown RBP eCLIP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms