RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 TMEM165Q9HC07 324 aa6.76□□□□□ -1.33
TRAPPC11-209ENST00000512476 ATP13A1Q9HD20 1204 aa6.76□□□□□ -1.33
TRAPPC11-209ENST00000512476 SEPT10Q9P0V9 454 aa6.76□□□□□ -1.33
TRAPPC11-209ENST00000512476 DKK3Q9UBP4 350 aa6.76□□□□□ -1.33
TRAPPC11-209ENST00000512476 TRIM33Q9UPN9 1127 aa6.76□□□□□ -1.33
TRAPPC11-209ENST00000512476 ANKRD30BQ9BXX2 1392 aa6.76□□□□□ -1.33
TRAPPC11-209ENST00000512476 KDM5CP41229 1560 aa6.76□□□□□ -1.33
TRAPPC11-209ENST00000512476 TRIM43BA6NCK2 446 aa6.76□□□□□ -1.33
TRAPPC11-209ENST00000512476 ASNA1O43681 348 aa6.76□□□□□ -1.33
TRAPPC11-209ENST00000512476 KDM1AO60341 852 aa6.76□□□□□ -1.33
TRAPPC11-209ENST00000512476 KRT37O76014 449 aa6.76□□□□□ -1.33
TRAPPC11-209ENST00000512476 OLFM2O95897 454 aa6.76□□□□□ -1.33
TRAPPC11-209ENST00000512476 PRR35P0CG20 571 aa6.76□□□□□ -1.33
TRAPPC11-209ENST00000512476 PTPN2P17706 415 aa6.76□□□□□ -1.33
TRAPPC11-209ENST00000512476 CHMP24386 653 aa6.76□□□□□ -1.33
TRAPPC11-209ENST00000512476 PTX3P26022 381 aaPredicted RBP6.76□□□□□ -1.33
TRAPPC11-209ENST00000512476 TARSP26639 723 aaKnown RBP6.76□□□□□ -1.33
TRAPPC11-209ENST00000512476 NNMTP40261 264 aa6.76□□□□□ -1.33
TRAPPC11-209ENST00000512476 YWHAHQ04917 246 aaPredicted RBP6.76□□□□□ -1.33
TRAPPC11-209ENST00000512476 ADCY2Q08462 1091 aa6.76□□□□□ -1.33
TRAPPC11-209ENST00000512476 CAMK2DQ13557 499 aa6.76□□□□□ -1.33
TRAPPC11-209ENST00000512476 ODF2Q5BJF6 829 aa6.76□□□□□ -1.33
TRAPPC11-209ENST00000512476 WIPI1Q5MNZ9 446 aaPredicted RBP6.76□□□□□ -1.33
TRAPPC11-209ENST00000512476 METTL11BQ5VVY1 283 aa6.76□□□□□ -1.33
TRAPPC11-209ENST00000512476 CEP135Q66GS9 1140 aa6.76□□□□□ -1.33
TRAPPC11-209ENST00000512476 GALNT4Q8N4A0 578 aa6.76□□□□□ -1.33
TRAPPC11-209ENST00000512476 GOLGA6L1Q8N7Z2 621 aa6.76□□□□□ -1.33
TRAPPC11-209ENST00000512476 SPPL3Q8TCT6 385 aa6.76□□□□□ -1.33
TRAPPC11-209ENST00000512476 METTL21AQ8WXB1 218 aa6.76□□□□□ -1.33
TRAPPC11-209ENST00000512476 TRIM43Q96BQ3 446 aaPredicted RBP6.76□□□□□ -1.33
TRAPPC11-209ENST00000512476 CALML4Q96GE6 196 aa6.76□□□□□ -1.33
TRAPPC11-209ENST00000512476 BRD8Q9H0E9 1235 aa6.76□□□□□ -1.33
TRAPPC11-209ENST00000512476 SEMA4AQ9H3S1 761 aa6.76□□□□□ -1.33
TRAPPC11-209ENST00000512476 MROH8Q9H579 483 aa6.76□□□□□ -1.33
TRAPPC11-209ENST00000512476 PNPLA8Q9NP80 782 aa6.76□□□□□ -1.33
TRAPPC11-209ENST00000512476 WHRNQ9P202 907 aa6.76□□□□□ -1.33
TRAPPC11-209ENST00000512476 TTC41PQ6P2S7 1318 aa6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 MAGI2Q86UL8 1455 aa6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 A0A096LPE4 126 aa6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 A0A1W2PPZ6 126 aa6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 PIP5K1BO14986 540 aa6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 MSCO60682 206 aa6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 AFPP02771 609 aaKnown RBP6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 TPOP07202 933 aa6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 HLA-DPA1P20036 260 aa6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 GGT5P36269 586 aa6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 TFAP4Q01664 338 aa6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 RELQ04864 619 aaPredicted RBP6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 RUNX1T1Q06455 604 aa6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 CHRNDQ07001 517 aa6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 CBX3Q13185 183 aa6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 TARBP2Q15633 366 aaKnown RBP6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 FAM47CQ5HY64 1035 aa6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 IER5LQ5T953 404 aa6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 MAP1SQ66K74 1059 aaPredicted RBP6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 ATG9AQ7Z3C6 839 aa6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 PRPF39Q86UA1 669 aaKnown RBP6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 TRIM74Q86UV6 250 aa6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 TRIM73Q86UV7 250 aa6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 KRT73Q86Y46 540 aa6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 UNC5CLQ8IV45 518 aa6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 LINC00346Q8IVM7 164 aa6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 FAM9CQ8IZT9 166 aa6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 TMEM57Q8N5G2 664 aa6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 CTCFLQ8NI51 663 aaPredicted RBP6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 CASP10Q92851 521 aa6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 EDEM2Q9BV94 578 aa6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 PLVAPQ9BX97 442 aa6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 RNPEPQ9H4A4 650 aa6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 TAS2R3Q9NYW6 316 aa6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 RABGEF1Q9UJ41 708 aa6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 DTNAQ9Y4J8 743 aa6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 GPR45Q9Y5Y3 372 aa6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 KIDINS220Q9ULH0 1771 aa6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 ATP8B3O60423 1300 aa6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 FAM135AQ9P2D6 1515 aa6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 STMND1H3BQB6 276 aa6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 ALDH1A1P00352 501 aa6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 GCH1P30793 250 aa6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 MTIF2P46199 727 aaKnown RBP6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 KCNC1P48547 511 aa6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 RAD23AP54725 363 aa6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 STARD6P59095 220 aa6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 HTRA4P83105 476 aaPredicted RBP6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 POU4F3Q15319 338 aa6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 SUPT20HL1Q3ZLR7 823 aa6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 DRICH1Q6PGQ1 229 aaPredicted RBP6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 TAOK1Q7L7X3 1001 aa6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 CAND1Q86VP6 1230 aaKnown RBP6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 SLC7A5P1Q8MH63 180 aa6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 AADATQ8N5Z0 425 aa6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 TMCO5AQ8N6Q1 288 aa6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 FAM71DQ8N9W8 422 aa6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 OR6J1Q8NGC5 347 aa6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 AIDAQ96BJ3 306 aa6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 CMTM3Q96MX0 182 aa6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 AGAP2Q99490 1192 aa6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 CCDC106Q9BWC9 280 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms