RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 RASGEF1CQ8N431 466 aa14.01□□□□□ -0.17
DEPDC1B-206ENST00000512452 ARHGEF26Q96DR7 871 aa14.01□□□□□ -0.17
DEPDC1B-206ENST00000512452 VCPIP1Q96JH7 1222 aa14.01□□□□□ -0.17
DEPDC1B-206ENST00000512452 FDXACB1Q9BRP7 624 aaPredicted RBP14.01□□□□□ -0.17
DEPDC1B-206ENST00000512452 KATNAL1Q9BW62 490 aa14.01□□□□□ -0.17
DEPDC1B-206ENST00000512452 NIF3L1Q9GZT8 377 aa14.01□□□□□ -0.17
DEPDC1B-206ENST00000512452 AP5M1Q9H0R1 490 aa14.01□□□□□ -0.17
DEPDC1B-206ENST00000512452 PDZD7Q9H5P4 517 aa14.01□□□□□ -0.17
DEPDC1B-206ENST00000512452 MINDY3Q9H8M7 445 aa14.01□□□□□ -0.17
DEPDC1B-206ENST00000512452 FAM53CQ9NYF3 392 aa14.01□□□□□ -0.17
DEPDC1B-206ENST00000512452 CTTNBP2NLQ9P2B4 639 aa14.01□□□□□ -0.17
DEPDC1B-206ENST00000512452 HAS3O00219 553 aa14□□□□□ -0.17
DEPDC1B-206ENST00000512452 KCNK3O14649 394 aa14□□□□□ -0.17
DEPDC1B-206ENST00000512452 B4GALT5O43286 388 aa14□□□□□ -0.17
DEPDC1B-206ENST00000512452 CYP1A1P04798 512 aaPredicted RBP14□□□□□ -0.17
DEPDC1B-206ENST00000512452 RHOXF2BP0C7M4 288 aa14□□□□□ -0.17
DEPDC1B-206ENST00000512452 ATICP31939 592 aa14□□□□□ -0.17
DEPDC1B-206ENST00000512452 TNNC1P63316 161 aa14□□□□□ -0.17
DEPDC1B-206ENST00000512452 CENPCQ03188 943 aa14□□□□□ -0.17
DEPDC1B-206ENST00000512452 FPGSQ05932 587 aa14□□□□□ -0.17
DEPDC1B-206ENST00000512452 PPP2R5EQ16537 467 aa14□□□□□ -0.17
DEPDC1B-206ENST00000512452 TAF3Q5VWG9 929 aa14□□□□□ -0.17
DEPDC1B-206ENST00000512452 THNSL1Q8IYQ7 743 aa14□□□□□ -0.17
DEPDC1B-206ENST00000512452 NLRP7Q8WX94 980 aa14□□□□□ -0.17
DEPDC1B-206ENST00000512452 PNKPQ96T60 521 aa14□□□□□ -0.17
DEPDC1B-206ENST00000512452 NAP1L3Q99457 506 aaPredicted RBP14□□□□□ -0.17
DEPDC1B-206ENST00000512452 RHOXF2Q9BQY4 288 aa14□□□□□ -0.17
DEPDC1B-206ENST00000512452 ADPGKQ9BRR6 497 aa14□□□□□ -0.17
DEPDC1B-206ENST00000512452 GCOM2Q9BZD3 368 aaPredicted RBP14□□□□□ -0.17
DEPDC1B-206ENST00000512452 CARD9Q9H257 536 aa14□□□□□ -0.17
DEPDC1B-206ENST00000512452 VRTNQ9H8Y1 702 aa14□□□□□ -0.17
DEPDC1B-206ENST00000512452 ZNF446Q9NWS9 450 aa14□□□□□ -0.17
DEPDC1B-206ENST00000512452 LCMT1Q9UIC8 334 aa14□□□□□ -0.17
DEPDC1B-206ENST00000512452 TMEM59LQ9UK28 342 aa14□□□□□ -0.17
DEPDC1B-206ENST00000512452 NUB1Q9Y5A7 615 aa14□□□□□ -0.17
DEPDC1B-206ENST00000512452 PCDHB4Q9Y5E5 795 aa14□□□□□ -0.17
DEPDC1B-206ENST00000512452 CFAP54Q96N23 3096 aa14□□□□□ -0.17
DEPDC1B-206ENST00000512452 A0A1B0GUA9 196 aa13.99□□□□□ -0.17
DEPDC1B-206ENST00000512452 CCDC188H7C350 402 aa13.99□□□□□ -0.17
DEPDC1B-206ENST00000512452 PGRMC1O00264 195 aaKnown RBP13.99□□□□□ -0.17
DEPDC1B-206ENST00000512452 TULP1O00294 542 aaPredicted RBP13.99□□□□□ -0.17
DEPDC1B-206ENST00000512452 DNM1LO00429 736 aa13.99□□□□□ -0.17
DEPDC1B-206ENST00000512452 TSPAN1O60635 241 aa13.99□□□□□ -0.17
DEPDC1B-206ENST00000512452 ERLIN2O94905 339 aa13.99□□□□□ -0.17
DEPDC1B-206ENST00000512452 STAU1O95793 577 aaKnown RBP13.99□□□□□ -0.17
DEPDC1B-206ENST00000512452 STAG3L1P0CL83 205 aa13.99□□□□□ -0.17
DEPDC1B-206ENST00000512452 SMIM10L2AP0DMW4 78 aa13.99□□□□□ -0.17
DEPDC1B-206ENST00000512452 SMIM10L2BP0DMW5 78 aa13.99□□□□□ -0.17
DEPDC1B-206ENST00000512452 TNFRSF8P28908 595 aa13.99□□□□□ -0.17
DEPDC1B-206ENST00000512452 AXLP30530 894 aa13.99□□□□□ -0.17
DEPDC1B-206ENST00000512452 CXCR5P32302 372 aa13.99□□□□□ -0.17
DEPDC1B-206ENST00000512452 MFSD10Q14728 455 aa13.99□□□□□ -0.17
DEPDC1B-206ENST00000512452 TTC39CQ8N584 583 aa13.99□□□□□ -0.17
DEPDC1B-206ENST00000512452 RBBP8NLQ8NC74 664 aaPredicted RBP13.99□□□□□ -0.17
DEPDC1B-206ENST00000512452 ZNF653Q96CK0 615 aa13.99□□□□□ -0.17
DEPDC1B-206ENST00000512452 TSPAN18Q96SJ8 248 aa13.99□□□□□ -0.17
DEPDC1B-206ENST00000512452 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.99□□□□□ -0.173e-6■□□□□ 10.1
DEPDC1B-206ENST00000512452 MTMR12Q9C0I1 747 aa13.99□□□□□ -0.17
DEPDC1B-206ENST00000512452 WNT8AQ9H1J5 351 aa13.99□□□□□ -0.17
DEPDC1B-206ENST00000512452 ADAMTS10Q9H324 1103 aa13.99□□□□□ -0.17
DEPDC1B-206ENST00000512452 OSGEPQ9NPF4 335 aa13.99□□□□□ -0.17
DEPDC1B-206ENST00000512452 MSRAQ9UJ68 235 aa13.99□□□□□ -0.17
DEPDC1B-206ENST00000512452 DERAQ9Y315 318 aa13.99□□□□□ -0.17
DEPDC1B-206ENST00000512452 C2CD2Q9Y426 696 aa13.99□□□□□ -0.17
DEPDC1B-206ENST00000512452 SPTBN4Q9H254 2564 aa13.98□□□□□ -0.17
DEPDC1B-206ENST00000512452 ADCY6O43306 1168 aa13.98□□□□□ -0.17
DEPDC1B-206ENST00000512452 LSM8O95777 96 aaKnown RBP13.98□□□□□ -0.17
DEPDC1B-206ENST00000512452 VTNP04004 478 aa13.98□□□□□ -0.17
DEPDC1B-206ENST00000512452 IQCF3P0C7M6 154 aa13.98□□□□□ -0.17
DEPDC1B-206ENST00000512452 GNAT1P11488 350 aa13.98□□□□□ -0.17
DEPDC1B-206ENST00000512452 ARF4P18085 180 aaPredicted RBP13.98□□□□□ -0.17
DEPDC1B-206ENST00000512452 GNA15P30679 374 aa13.98□□□□□ -0.17
DEPDC1B-206ENST00000512452 GRM5P41594 1212 aa13.98□□□□□ -0.17
DEPDC1B-206ENST00000512452 PSEN2P49810 448 aa13.98□□□□□ -0.17
DEPDC1B-206ENST00000512452 PTPN5P54829 565 aa13.98□□□□□ -0.17
DEPDC1B-206ENST00000512452 MYL6P60660 151 aa13.98□□□□□ -0.17
DEPDC1B-206ENST00000512452 VSNL1P62760 191 aa13.98□□□□□ -0.17
DEPDC1B-206ENST00000512452 ADAM17P78536 824 aa13.98□□□□□ -0.17
DEPDC1B-206ENST00000512452 TFAMQ00059 246 aaKnown RBP13.98□□□□□ -0.17
DEPDC1B-206ENST00000512452 C2orf54Q08AI8 447 aa13.98□□□□□ -0.17
DEPDC1B-206ENST00000512452 ZNF699Q32M78 642 aa13.98□□□□□ -0.17
DEPDC1B-206ENST00000512452 SEZ6Q53EL9 994 aa13.98□□□□□ -0.17
DEPDC1B-206ENST00000512452 BEND6Q5SZJ8 279 aaPredicted RBP13.98□□□□□ -0.17
DEPDC1B-206ENST00000512452 SPOPLQ6IQ16 392 aa13.98□□□□□ -0.17
DEPDC1B-206ENST00000512452 TMEM270Q6UE05 265 aa13.98□□□□□ -0.17
DEPDC1B-206ENST00000512452 PHF13Q86YI8 300 aaPredicted RBP13.98□□□□□ -0.17
DEPDC1B-206ENST00000512452 EFCAB13Q8IY85 973 aa13.98□□□□□ -0.17
DEPDC1B-206ENST00000512452 GJD3Q8N144 294 aa13.98□□□□□ -0.17
DEPDC1B-206ENST00000512452 UBL4BQ8N7F7 174 aa13.98□□□□□ -0.17
DEPDC1B-206ENST00000512452 KAT2BQ92831 832 aa13.98□□□□□ -0.17
DEPDC1B-206ENST00000512452 SCLT1Q96NL6 688 aa13.98□□□□□ -0.17
DEPDC1B-206ENST00000512452 ARID3AQ99856 593 aa13.98□□□□□ -0.17
DEPDC1B-206ENST00000512452 ZNF518BQ9C0D4 1074 aa13.98□□□□□ -0.17
DEPDC1B-206ENST00000512452 XYLT2Q9H1B5 865 aa13.98□□□□□ -0.17
DEPDC1B-206ENST00000512452 EPC1Q9H2F5 836 aa13.98□□□□□ -0.17
DEPDC1B-206ENST00000512452 PLEKHA5Q9HAU0 1116 aa13.98□□□□□ -0.17
DEPDC1B-206ENST00000512452 CYP3A43Q9HB55 503 aa13.98□□□□□ -0.17
DEPDC1B-206ENST00000512452 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.98□□□□□ -0.172e-6■■■■■ 149.1
DEPDC1B-206ENST00000512452 FLRT1Q9NZU1 646 aa13.98□□□□□ -0.17
DEPDC1B-206ENST00000512452 EVPLQ92817 2033 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms