RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 PPP2R5AQ15172 486 aa20.8■□□□□ 0.92
HMGCS1-206ENST00000511774 C1orf228Q6PIY5 440 aa20.8■□□□□ 0.92
HMGCS1-206ENST00000511774 ZBTB45Q96K62 511 aaPredicted RBP20.8■□□□□ 0.92
HMGCS1-206ENST00000511774 TARS2Q9BW92 718 aaKnown RBP20.8■□□□□ 0.92
HMGCS1-206ENST00000511774 TOPORSQ9NS56 1045 aaPredicted RBP20.8■□□□□ 0.92
HMGCS1-206ENST00000511774 MAFFQ9ULX9 164 aa20.8■□□□□ 0.92
HMGCS1-206ENST00000511774 PCDHB8Q9UN66 801 aa20.8■□□□□ 0.92
HMGCS1-206ENST00000511774 K7ERI5 159 aa20.79■□□□□ 0.92
HMGCS1-206ENST00000511774 REC8O95072 547 aa20.79■□□□□ 0.92
HMGCS1-206ENST00000511774 PROZP22891 400 aa20.79■□□□□ 0.92
HMGCS1-206ENST00000511774 RPA1P27694 616 aa20.79■□□□□ 0.92
HMGCS1-206ENST00000511774 RPL9P32969 192 aaKnown RBP20.79■□□□□ 0.92
HMGCS1-206ENST00000511774 SEZ6Q53EL9 994 aa20.79■□□□□ 0.92
HMGCS1-206ENST00000511774 FSTL4Q6MZW2 842 aa20.79■□□□□ 0.92
HMGCS1-206ENST00000511774 DAW1Q8N136 415 aa20.79■□□□□ 0.92
HMGCS1-206ENST00000511774 SLC27A5Q9Y2P5 690 aa20.79■□□□□ 0.92
HMGCS1-206ENST00000511774 DENND4CQ5VZ89 1909 aa20.78■□□□□ 0.92
HMGCS1-206ENST00000511774 MYO16Q9Y6X6 1858 aa20.78■□□□□ 0.92
HMGCS1-206ENST00000511774 OTOL1A6NHN0 477 aaPredicted RBP20.78■□□□□ 0.92
HMGCS1-206ENST00000511774 MCM7P33993 719 aa20.78■□□□□ 0.92
HMGCS1-206ENST00000511774 SLC10A6Q3KNW5 377 aa20.78■□□□□ 0.92
HMGCS1-206ENST00000511774 PLK5Q496M5 336 aa20.78■□□□□ 0.92
HMGCS1-206ENST00000511774 ARHGAP29Q52LW3 1261 aa20.78■□□□□ 0.92
HMGCS1-206ENST00000511774 RNF43Q68DV7 783 aa20.78■□□□□ 0.92
HMGCS1-206ENST00000511774 CENPQQ7L2Z9 268 aaPredicted RBP20.78■□□□□ 0.92
HMGCS1-206ENST00000511774 DIS3L2Q8IYB7 885 aaKnown RBP20.78■□□□□ 0.92
HMGCS1-206ENST00000511774 SYNPOQ8N3V7 929 aa20.78■□□□□ 0.92
HMGCS1-206ENST00000511774 KDF1Q8NAX2 398 aaPredicted RBP20.78■□□□□ 0.92
HMGCS1-206ENST00000511774 FAM200AQ8TCP9 573 aa20.78■□□□□ 0.92
HMGCS1-206ENST00000511774 ZC3H10Q96K80 434 aaKnown RBP20.78■□□□□ 0.92
HMGCS1-206ENST00000511774 IFT74Q96LB3 600 aa20.78■□□□□ 0.92
HMGCS1-206ENST00000511774 SMG9Q9H0W8 520 aaKnown RBP20.78■□□□□ 0.92
HMGCS1-206ENST00000511774 CACNA1EQ15878 2313 aa20.78■□□□□ 0.92
HMGCS1-206ENST00000511774 ASCC3Q8N3C0 2202 aaKnown RBP20.78■□□□□ 0.92
HMGCS1-206ENST00000511774 LAMA5O15230 3695 aa20.77■□□□□ 0.92
HMGCS1-206ENST00000511774 KIAA1549LQ6ZVL6 1849 aa20.77■□□□□ 0.92
HMGCS1-206ENST00000511774 M0QZQ0 153 aa20.77■□□□□ 0.92
HMGCS1-206ENST00000511774 DCLK1O15075 740 aa20.77■□□□□ 0.92
HMGCS1-206ENST00000511774 OAZ2O95190 189 aa20.77■□□□□ 0.92
HMGCS1-206ENST00000511774 CCDC192P0DO97 292 aa20.77■□□□□ 0.92
HMGCS1-206ENST00000511774 NPTX2P47972 431 aa20.77■□□□□ 0.92
HMGCS1-206ENST00000511774 CDR1P51861 262 aa20.77■□□□□ 0.92
HMGCS1-206ENST00000511774 GPR158Q5T848 1215 aa20.77■□□□□ 0.92
HMGCS1-206ENST00000511774 ATAD1Q8NBU5 361 aa20.77■□□□□ 0.92
HMGCS1-206ENST00000511774 APPL2Q8NEU8 664 aa20.77■□□□□ 0.92
HMGCS1-206ENST00000511774 ACAP3Q96P50 834 aa20.77■□□□□ 0.92
HMGCS1-206ENST00000511774 TMEM209Q96SK2 561 aa20.77■□□□□ 0.92
HMGCS1-206ENST00000511774 DUSP15Q9H1R2 295 aaPredicted RBP20.77■□□□□ 0.92
HMGCS1-206ENST00000511774 BHMT2Q9H2M3 363 aa20.77■□□□□ 0.92
HMGCS1-206ENST00000511774 FBRSL1Q9HCM7 1045 aaKnown RBP20.77■□□□□ 0.92
HMGCS1-206ENST00000511774 PCDHGA5Q9Y5G8 931 aa20.77■□□□□ 0.92
HMGCS1-206ENST00000511774 PHLPP2Q6ZVD8 1323 aa20.77■□□□□ 0.91
HMGCS1-206ENST00000511774 TSC2P49815 1807 aa20.76■□□□□ 0.91
HMGCS1-206ENST00000511774 CCDC163A0A0D9SF12 145 aa20.76■□□□□ 0.91
HMGCS1-206ENST00000511774 LARGE1O95461 756 aa20.76■□□□□ 0.91
HMGCS1-206ENST00000511774 MCF2P10911 925 aa20.76■□□□□ 0.91
HMGCS1-206ENST00000511774 HARSP12081 509 aaKnown RBP20.76■□□□□ 0.91
HMGCS1-206ENST00000511774 NOVA1P51513 510 aaKnown RBP20.76■□□□□ 0.91
HMGCS1-206ENST00000511774 PEX3P56589 373 aa20.76■□□□□ 0.91
HMGCS1-206ENST00000511774 CYP4F8P98187 520 aa20.76■□□□□ 0.91
HMGCS1-206ENST00000511774 SPAG1Q07617 926 aa20.76■□□□□ 0.91
HMGCS1-206ENST00000511774 FOXC1Q12948 553 aa20.76■□□□□ 0.91
HMGCS1-206ENST00000511774 NAIF1Q69YI7 327 aaPredicted RBP20.76■□□□□ 0.91
HMGCS1-206ENST00000511774 CENPPQ6IPU0 288 aa20.76■□□□□ 0.91
HMGCS1-206ENST00000511774 DNAJB7Q7Z6W7 309 aaPredicted RBP20.76■□□□□ 0.91
HMGCS1-206ENST00000511774 NECAB1Q8N987 351 aa20.76■□□□□ 0.91
HMGCS1-206ENST00000511774 KIFAP3Q92845 792 aa20.76■□□□□ 0.91
HMGCS1-206ENST00000511774 ATXN3LQ9H3M9 355 aa20.76■□□□□ 0.91
HMGCS1-206ENST00000511774 BRMS1Q9HCU9 246 aa20.76■□□□□ 0.91
HMGCS1-206ENST00000511774 HPS4Q9NQG7 708 aa20.76■□□□□ 0.91
HMGCS1-206ENST00000511774 VPS45Q9NRW7 570 aa20.76■□□□□ 0.91
HMGCS1-206ENST00000511774 ARHGAP28Q9P2N2 729 aa20.76■□□□□ 0.91
HMGCS1-206ENST00000511774 MTMR11A4FU01 709 aa20.75■□□□□ 0.91
HMGCS1-206ENST00000511774 CCDC169A6NNP5 214 aa20.75■□□□□ 0.91
HMGCS1-206ENST00000511774 C4orf47A7E2U8 309 aa20.75■□□□□ 0.91
HMGCS1-206ENST00000511774 GABRR2P28476 465 aa20.75■□□□□ 0.91
HMGCS1-206ENST00000511774 EPHB3P54753 998 aa20.75■□□□□ 0.91
HMGCS1-206ENST00000511774 YWHAHQ04917 246 aaPredicted RBP20.75■□□□□ 0.91
HMGCS1-206ENST00000511774 TMEM196Q5HYL7 178 aa20.75■□□□□ 0.91
HMGCS1-206ENST00000511774 APBB1IPQ7Z5R6 666 aaPredicted RBP20.75■□□□□ 0.91
HMGCS1-206ENST00000511774 BPIFB1Q8TDL5 484 aa20.75■□□□□ 0.91
HMGCS1-206ENST00000511774 HHIPQ96QV1 700 aa20.75■□□□□ 0.91
HMGCS1-206ENST00000511774 EDEM2Q9BV94 578 aa20.75■□□□□ 0.91
HMGCS1-206ENST00000511774 MRPL4Q9BYD3 311 aaKnown RBP20.75■□□□□ 0.91
HMGCS1-206ENST00000511774 IL21Q9HBE4 155 aa20.75■□□□□ 0.91
HMGCS1-206ENST00000511774 OBP2AQ9NY56 170 aa20.75■□□□□ 0.91
HMGCS1-206ENST00000511774 ZNF638Q14966 1978 aaKnown RBP20.75■□□□□ 0.91
HMGCS1-206ENST00000511774 DPYSL4O14531 572 aa20.74■□□□□ 0.91
HMGCS1-206ENST00000511774 OBSL1O75147 1896 aa20.74■□□□□ 0.91
HMGCS1-206ENST00000511774 EGFP01133 1207 aa20.74■□□□□ 0.91
HMGCS1-206ENST00000511774 AARSP49588 968 aaKnown RBP eCLIP20.74■□□□□ 0.919e-6■□□□□ 8.7
HMGCS1-206ENST00000511774 GUCY2FP51841 1108 aa20.74■□□□□ 0.91
HMGCS1-206ENST00000511774 ZNF252P-AS1Q0IIN9 211 aa20.74■□□□□ 0.91
HMGCS1-206ENST00000511774 MAPK7Q13164 816 aa20.74■□□□□ 0.91
HMGCS1-206ENST00000511774 GPR17Q13304 367 aa20.74■□□□□ 0.91
HMGCS1-206ENST00000511774 ITPRIPL2Q3MIP1 535 aa20.74■□□□□ 0.91
HMGCS1-206ENST00000511774 MPZL3Q6UWV2 235 aa20.74■□□□□ 0.91
HMGCS1-206ENST00000511774 RIN3Q8TB24 985 aa20.74■□□□□ 0.91
HMGCS1-206ENST00000511774 GATA6Q92908 595 aa20.74■□□□□ 0.91
HMGCS1-206ENST00000511774 PSMG2Q969U7 264 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms