RNA–Protein interactions for RNA: ENST00000511214.1

SNF8-210, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-210ENST00000511214 MMADHCQ9H3L0 296 aaPredicted RBP9.62□□□□□ -0.87
SNF8-210ENST00000511214 DCLRE1BQ9H816 532 aa9.62□□□□□ -0.87
SNF8-210ENST00000511214 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.62□□□□□ -0.87
SNF8-210ENST00000511214 PCDH9Q9HC56 1237 aa9.62□□□□□ -0.87
SNF8-210ENST00000511214 SAYSD1Q9NPB0 183 aa9.62□□□□□ -0.87
SNF8-210ENST00000511214 DDX56Q9NY93 547 aaKnown RBP9.62□□□□□ -0.87
SNF8-210ENST00000511214 TCEAL9Q9UHQ7 104 aa9.62□□□□□ -0.87
SNF8-210ENST00000511214 GGT7Q9UJ14 662 aa9.62□□□□□ -0.87
SNF8-210ENST00000511214 LTBP4Q8N2S1 1624 aa9.62□□□□□ -0.87
SNF8-210ENST00000511214 ASTN2O75129 1339 aaPredicted RBP9.61□□□□□ -0.87
SNF8-210ENST00000511214 GOLGA8IPA6NC78 632 aa9.61□□□□□ -0.87
SNF8-210ENST00000511214 GOLGA8JA6NMD2 632 aa9.61□□□□□ -0.87
SNF8-210ENST00000511214 WDR64B1ANS9 1081 aa9.61□□□□□ -0.87
SNF8-210ENST00000511214 TBC1D12O60347 775 aa9.61□□□□□ -0.87
SNF8-210ENST00000511214 DNAJC6O75061 913 aa9.61□□□□□ -0.87
SNF8-210ENST00000511214 TGDSO95455 350 aa9.61□□□□□ -0.87
SNF8-210ENST00000511214 NPTXRO95502 500 aa9.61□□□□□ -0.87
SNF8-210ENST00000511214 ITGAVP06756 1048 aa9.61□□□□□ -0.87
SNF8-210ENST00000511214 SLURP2P0DP57 97 aa9.61□□□□□ -0.87
SNF8-210ENST00000511214 TAL1P17542 331 aaPredicted RBP9.61□□□□□ -0.87
SNF8-210ENST00000511214 KRT15P19012 456 aa9.61□□□□□ -0.87
SNF8-210ENST00000511214 TBXAS1P24557 533 aaPredicted RBP9.61□□□□□ -0.87
SNF8-210ENST00000511214 MARK3P27448 753 aa9.61□□□□□ -0.87
SNF8-210ENST00000511214 PTGER2P43116 358 aa9.61□□□□□ -0.87
SNF8-210ENST00000511214 NPTX2P47972 431 aa9.61□□□□□ -0.87
SNF8-210ENST00000511214 CACNB3P54284 484 aa9.61□□□□□ -0.87
SNF8-210ENST00000511214 NOMO3P69849 1222 aa9.61□□□□□ -0.87
SNF8-210ENST00000511214 JAG1P78504 1218 aa9.61□□□□□ -0.87
SNF8-210ENST00000511214 NFX1Q12986 1120 aaKnown RBP9.61□□□□□ -0.87
SNF8-210ENST00000511214 DNAJC3Q13217 504 aa9.61□□□□□ -0.87
SNF8-210ENST00000511214 MAMLD1Q13495 774 aa9.61□□□□□ -0.87
SNF8-210ENST00000511214 PSMD6Q15008 389 aa9.61□□□□□ -0.87
SNF8-210ENST00000511214 TRIP13Q15645 432 aaPredicted RBP9.61□□□□□ -0.87
SNF8-210ENST00000511214 C11orf91Q3C1V1 193 aa9.61□□□□□ -0.87
SNF8-210ENST00000511214 GSTA5Q7RTV2 222 aa9.61□□□□□ -0.87
SNF8-210ENST00000511214 LONP2Q86WA8 852 aa9.61□□□□□ -0.87
SNF8-210ENST00000511214 CCDC125Q86Z20 511 aa9.61□□□□□ -0.87
SNF8-210ENST00000511214 FEZF2Q8TBJ5 459 aa9.61□□□□□ -0.87
SNF8-210ENST00000511214 CCDC127Q96BQ5 260 aa9.61□□□□□ -0.87
SNF8-210ENST00000511214 C9orf72Q96LT7 481 aa9.61□□□□□ -0.87
SNF8-210ENST00000511214 NUDCD1Q96RS6 583 aa9.61□□□□□ -0.87
SNF8-210ENST00000511214 DHRS4Q9BTZ2 278 aa9.61□□□□□ -0.87
SNF8-210ENST00000511214 TBC1D10AQ9BXI6 508 aa9.61□□□□□ -0.87
SNF8-210ENST00000511214 VPS11Q9H270 941 aa9.61□□□□□ -0.87
SNF8-210ENST00000511214 MLXIPLQ9NP71 852 aa9.61□□□□□ -0.87
SNF8-210ENST00000511214 KMT5AQ9NQR1 393 aa9.61□□□□□ -0.87
SNF8-210ENST00000511214 PARVAQ9NVD7 372 aa9.61□□□□□ -0.87
SNF8-210ENST00000511214 TMOD2Q9NZR1 351 aa9.61□□□□□ -0.87
SNF8-210ENST00000511214 ANKFY1Q9P2R3 1169 aa9.61□□□□□ -0.87
SNF8-210ENST00000511214 STOML1Q9UBI4 398 aa9.61□□□□□ -0.87
SNF8-210ENST00000511214 CHORDC1Q9UHD1 332 aaPredicted RBP9.61□□□□□ -0.87
SNF8-210ENST00000511214 TBK1Q9UHD2 729 aa9.61□□□□□ -0.87
SNF8-210ENST00000511214 ZBTB21Q9ULJ3 1066 aa9.61□□□□□ -0.87
SNF8-210ENST00000511214 TRIM33Q9UPN9 1127 aa9.61□□□□□ -0.87
SNF8-210ENST00000511214 DENND3A2RUS2 1198 aa9.6□□□□□ -0.87
SNF8-210ENST00000511214 AHCYL1O43865 530 aa9.6□□□□□ -0.87
SNF8-210ENST00000511214 EXTL3O43909 919 aa9.6□□□□□ -0.87
SNF8-210ENST00000511214 TOM1O60784 492 aa9.6□□□□□ -0.87
SNF8-210ENST00000511214 CCDC22O60826 627 aa9.6□□□□□ -0.87
SNF8-210ENST00000511214 FAM155BO75949 473 aa9.6□□□□□ -0.87
SNF8-210ENST00000511214 LSM8O95777 96 aaKnown RBP9.6□□□□□ -0.87
SNF8-210ENST00000511214 CALB1P05937 261 aa9.6□□□□□ -0.87
SNF8-210ENST00000511214 ATP5BP06576 529 aaKnown RBP9.6□□□□□ -0.87
SNF8-210ENST00000511214 FESP07332 822 aa9.6□□□□□ -0.87
SNF8-210ENST00000511214 T-ENOLP0DO92 83 aa9.6□□□□□ -0.87
SNF8-210ENST00000511214 ACO1P21399 889 aaKnown RBP9.6□□□□□ -0.87
SNF8-210ENST00000511214 CA4P22748 312 aa9.6□□□□□ -0.87
SNF8-210ENST00000511214 RAD23BP54727 409 aa9.6□□□□□ -0.87
SNF8-210ENST00000511214 VCPP55072 806 aaKnown RBP9.6□□□□□ -0.87
SNF8-210ENST00000511214 GEMIN4P57678 1058 aaKnown RBP9.6□□□□□ -0.87
SNF8-210ENST00000511214 TAS2R40P59535 323 aa9.6□□□□□ -0.87
SNF8-210ENST00000511214 UBXN2AP68543 259 aa9.6□□□□□ -0.87
SNF8-210ENST00000511214 CDK18Q07002 472 aa9.6□□□□□ -0.87
SNF8-210ENST00000511214 SF3A3Q12874 501 aaKnown RBP eCLIP9.6□□□□□ -0.87
SNF8-210ENST00000511214 MTMR1Q13613 665 aa9.6□□□□□ -0.87
SNF8-210ENST00000511214 KRT72Q14CN4 511 aa9.6□□□□□ -0.87
SNF8-210ENST00000511214 NBPF20Q3BBV1 942 aa9.6□□□□□ -0.87
SNF8-210ENST00000511214 ZACNQ401N2 412 aa9.6□□□□□ -0.87
SNF8-210ENST00000511214 XKR9Q5GH70 373 aa9.6□□□□□ -0.87
SNF8-210ENST00000511214 FAM102BQ5T8I3 360 aa9.6□□□□□ -0.87
SNF8-210ENST00000511214 RNASEH2BQ5TBB1 312 aaKnown RBP9.6□□□□□ -0.87
SNF8-210ENST00000511214 CYP4F22Q6NT55 531 aa9.6□□□□□ -0.87
SNF8-210ENST00000511214 IRGCQ6NXR0 463 aa9.6□□□□□ -0.87
SNF8-210ENST00000511214 ADGRD1Q6QNK2 874 aa9.6□□□□□ -0.87
SNF8-210ENST00000511214 SLC30A10Q6XR72 485 aa9.6□□□□□ -0.87
SNF8-210ENST00000511214 FAM47EQ6ZV65 393 aa9.6□□□□□ -0.87
SNF8-210ENST00000511214 NLRP9Q7RTR0 991 aa9.6□□□□□ -0.87
SNF8-210ENST00000511214 CHSY1Q86X52 802 aa9.6□□□□□ -0.87
SNF8-210ENST00000511214 NLGN1Q8N2Q7 840 aa9.6□□□□□ -0.87
SNF8-210ENST00000511214 NIPA2Q8N8Q9 360 aa9.6□□□□□ -0.87
SNF8-210ENST00000511214 ATP11CQ8NB49 1132 aa9.6□□□□□ -0.87
SNF8-210ENST00000511214 TTC13Q8NBP0 860 aa9.6□□□□□ -0.87
SNF8-210ENST00000511214 RBBP8NLQ8NC74 664 aaPredicted RBP9.6□□□□□ -0.87
SNF8-210ENST00000511214 MCPH1Q8NEM0 835 aa9.6□□□□□ -0.87
SNF8-210ENST00000511214 MICAL1Q8TDZ2 1067 aa9.6□□□□□ -0.87
SNF8-210ENST00000511214 FAM151AQ8WW52 585 aa9.6□□□□□ -0.87
SNF8-210ENST00000511214 POMGNT1Q8WZA1 660 aa9.6□□□□□ -0.87
SNF8-210ENST00000511214 ZNF75CPQ92670 426 aaPredicted RBP9.6□□□□□ -0.87
SNF8-210ENST00000511214 SLITRK1Q96PX8 696 aa9.6□□□□□ -0.87
SNF8-210ENST00000511214 CSRNP1Q96S65 589 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms