RNA–Protein interactions for RNA: ENST00000510866.5

KDM3B-207, Transcript of lysine demethylase 3B, humanhuman

TSL 1 (best)

Gene KDM3B, Length 6,324 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-207ENST00000510866 C15orf52Q6ZUT6 534 aaKnown RBP7.53□□□□□ -1.2
KDM3B-207ENST00000510866 REPS2Q8NFH8 660 aa7.53□□□□□ -1.2
KDM3B-207ENST00000510866 MRPS31Q92665 395 aaKnown RBP7.53□□□□□ -1.2
KDM3B-207ENST00000510866 FAM163AQ96GL9 167 aaPredicted RBP7.53□□□□□ -1.2
KDM3B-207ENST00000510866 MYCBPQ99417 103 aaPredicted RBP7.53□□□□□ -1.2
KDM3B-207ENST00000510866 ZBTB18Q99592 522 aa7.53□□□□□ -1.2
KDM3B-207ENST00000510866 TRIM54Q9BYV2 358 aa7.53□□□□□ -1.2
KDM3B-207ENST00000510866 UVRAGQ9P2Y5 699 aa7.53□□□□□ -1.2
KDM3B-207ENST00000510866 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.53□□□□□ -1.2
KDM3B-207ENST00000510866 C3orf70A6NLC5 250 aaPredicted RBP7.53□□□□□ -1.2
KDM3B-207ENST00000510866 PSMD3O43242 534 aa7.53□□□□□ -1.2
KDM3B-207ENST00000510866 SYF2O95926 243 aaKnown RBP7.53□□□□□ -1.2
KDM3B-207ENST00000510866 MX2P20592 715 aa7.53□□□□□ -1.2
KDM3B-207ENST00000510866 AKT1P31749 480 aa7.53□□□□□ -1.2
KDM3B-207ENST00000510866 EPHB3P54753 998 aa7.53□□□□□ -1.2
KDM3B-207ENST00000510866 NR1H3Q13133 447 aa7.53□□□□□ -1.2
KDM3B-207ENST00000510866 PCSK7Q16549 785 aa7.53□□□□□ -1.2
KDM3B-207ENST00000510866 IQSEC1Q6DN90 963 aa7.53□□□□□ -1.2
KDM3B-207ENST00000510866 ABTB1Q969K4 478 aaPredicted RBP7.53□□□□□ -1.2
KDM3B-207ENST00000510866 PLAAQ9Y263 795 aa7.53□□□□□ -1.2
KDM3B-207ENST00000510866 IFT172Q9UG01 1749 aa7.53□□□□□ -1.2
KDM3B-207ENST00000510866 CFAP69A5D8W1 941 aa7.53□□□□□ -1.2
KDM3B-207ENST00000510866 TMEM88BA6NKF7 163 aa7.53□□□□□ -1.2
KDM3B-207ENST00000510866 CCT5P48643 541 aa7.53□□□□□ -1.2
KDM3B-207ENST00000510866 KLK7P49862 253 aa7.53□□□□□ -1.2
KDM3B-207ENST00000510866 RAB27AP51159 221 aa7.53□□□□□ -1.2
KDM3B-207ENST00000510866 NOGQ13253 232 aa7.53□□□□□ -1.2
KDM3B-207ENST00000510866 BTG3Q14201 252 aaPredicted RBP7.53□□□□□ -1.2
KDM3B-207ENST00000510866 PRAMEF19Q5SWL8 479 aa7.53□□□□□ -1.2
KDM3B-207ENST00000510866 IZUMO3Q5VZ72 239 aa7.53□□□□□ -1.2
KDM3B-207ENST00000510866 ACOT1Q86TX2 421 aa7.53□□□□□ -1.2
KDM3B-207ENST00000510866 RIOX2Q8IUF8 465 aa7.53□□□□□ -1.2
KDM3B-207ENST00000510866 CERS5Q8N5B7 392 aa7.53□□□□□ -1.2
KDM3B-207ENST00000510866 BCAS4Q8TDM0 211 aa7.53□□□□□ -1.2
KDM3B-207ENST00000510866 HDAC6Q9UBN7 1215 aa7.53□□□□□ -1.2
KDM3B-207ENST00000510866 TTLL13PA6NNM8 815 aa7.53□□□□□ -1.2
KDM3B-207ENST00000510866 SLC11A2P49281 568 aa7.53□□□□□ -1.2
KDM3B-207ENST00000510866 GALCP54803 685 aa7.53□□□□□ -1.2
KDM3B-207ENST00000510866 TWF1Q12792 350 aa7.53□□□□□ -1.2
KDM3B-207ENST00000510866 GIT2Q14161 759 aa7.53□□□□□ -1.2
KDM3B-207ENST00000510866 CBWD2Q8IUF1 395 aa7.53□□□□□ -1.2
KDM3B-207ENST00000510866 CCDC197Q8NCU1 140 aa7.53□□□□□ -1.2
KDM3B-207ENST00000510866 NLGN2Q8NFZ4 835 aa7.53□□□□□ -1.2
KDM3B-207ENST00000510866 SYT17Q9BSW7 474 aa7.53□□□□□ -1.2
KDM3B-207ENST00000510866 DDX47Q9H0S4 455 aaKnown RBP7.53□□□□□ -1.2
KDM3B-207ENST00000510866 RANBP17Q9H2T7 1088 aaKnown RBP7.53□□□□□ -1.2
KDM3B-207ENST00000510866 MRPL46Q9H2W6 279 aaKnown RBP7.53□□□□□ -1.2
KDM3B-207ENST00000510866 KANSL3Q9P2N6 904 aa7.53□□□□□ -1.2
KDM3B-207ENST00000510866 A0A1B0GTH6 734 aa7.52□□□□□ -1.21
KDM3B-207ENST00000510866 KPNA7A9QM74 516 aa7.52□□□□□ -1.21
KDM3B-207ENST00000510866 PRPF4O43172 522 aaKnown RBP eCLIP7.52□□□□□ -1.21
KDM3B-207ENST00000510866 ATMINO43313 823 aaPredicted RBP7.52□□□□□ -1.21
KDM3B-207ENST00000510866 SLC18A3Q16572 532 aa7.52□□□□□ -1.21
KDM3B-207ENST00000510866 ALS2CLQ60I27 953 aa7.52□□□□□ -1.21
KDM3B-207ENST00000510866 ZNF280DQ6N043 979 aa7.52□□□□□ -1.21
KDM3B-207ENST00000510866 ZNF677Q86XU0 584 aa7.52□□□□□ -1.21
KDM3B-207ENST00000510866 CLMNQ96JQ2 1002 aa7.52□□□□□ -1.21
KDM3B-207ENST00000510866 CGRRF1Q99675 332 aa7.52□□□□□ -1.21
KDM3B-207ENST00000510866 CNOT10Q9H9A5 744 aaKnown RBP7.52□□□□□ -1.21
KDM3B-207ENST00000510866 A0A087WUV0 522 aaPredicted RBP7.52□□□□□ -1.21
KDM3B-207ENST00000510866 TMCC1O94876 653 aa7.52□□□□□ -1.21
KDM3B-207ENST00000510866 SESN2P58004 480 aaPredicted RBP7.52□□□□□ -1.21
KDM3B-207ENST00000510866 ART3Q13508 389 aa7.52□□□□□ -1.21
KDM3B-207ENST00000510866 VGLL2Q8N8G2 317 aa7.52□□□□□ -1.21
KDM3B-207ENST00000510866 C1orf131Q8NDD1 294 aaKnown RBP7.52□□□□□ -1.21
KDM3B-207ENST00000510866 TRAPPC12Q8WVT3 735 aa7.52□□□□□ -1.21
KDM3B-207ENST00000510866 ATXN7L3BQ96GX2 97 aa7.52□□□□□ -1.21
KDM3B-207ENST00000510866 KRT82Q9NSB4 513 aa7.52□□□□□ -1.21
KDM3B-207ENST00000510866 DBR1Q9UK59 544 aaKnown RBP7.52□□□□□ -1.21
KDM3B-207ENST00000510866 TRPV2Q9Y5S1 764 aa7.52□□□□□ -1.21
KDM3B-207ENST00000510866 ADGRG1Q9Y653 693 aa7.52□□□□□ -1.21
KDM3B-207ENST00000510866 GAKO14976 1311 aa7.52□□□□□ -1.21
KDM3B-207ENST00000510866 CCDC195A0A1B0GUA6 201 aa7.52□□□□□ -1.21
KDM3B-207ENST00000510866 ARL4DP49703 201 aa7.52□□□□□ -1.21
KDM3B-207ENST00000510866 PMS2P54278 862 aa7.52□□□□□ -1.21
KDM3B-207ENST00000510866 TMPRSS15P98073 1019 aa7.52□□□□□ -1.21
KDM3B-207ENST00000510866 CCDC144BQ3MJ40 725 aa7.52□□□□□ -1.21
KDM3B-207ENST00000510866 CRLF3Q8IUI8 442 aa7.52□□□□□ -1.21
KDM3B-207ENST00000510866 SLC25A41Q8N5S1 370 aa7.52□□□□□ -1.21
KDM3B-207ENST00000510866 WNK4Q96J92 1243 aa7.52□□□□□ -1.21
KDM3B-207ENST00000510866 RNPC3Q96LT9 517 aaKnown RBP7.52□□□□□ -1.21
KDM3B-207ENST00000510866 RMDN2Q96LZ7 410 aa7.52□□□□□ -1.21
KDM3B-207ENST00000510866 A1CFQ9NQ94 594 aaKnown RBP7.52□□□□□ -1.21
KDM3B-207ENST00000510866 AGPAT5Q9NUQ2 364 aa7.52□□□□□ -1.21
KDM3B-207ENST00000510866 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.52□□□□□ -1.212e-6■■□□□ 13.8
KDM3B-207ENST00000510866 BAIAP2L1Q9UHR4 511 aa7.52□□□□□ -1.21
KDM3B-207ENST00000510866 TMEM247A6NEH6 219 aa7.52□□□□□ -1.21
KDM3B-207ENST00000510866 HSPA8P11142 646 aaKnown RBP7.52□□□□□ -1.21
KDM3B-207ENST00000510866 MYL4P12829 197 aa7.52□□□□□ -1.21
KDM3B-207ENST00000510866 ACO1P21399 889 aaKnown RBP7.52□□□□□ -1.21
KDM3B-207ENST00000510866 AKAP5P24588 427 aa7.52□□□□□ -1.21
KDM3B-207ENST00000510866 KLRC2P26717 231 aa7.52□□□□□ -1.21
KDM3B-207ENST00000510866 CASP4P49662 377 aa7.52□□□□□ -1.21
KDM3B-207ENST00000510866 RPL10AP62906 217 aaKnown RBP7.52□□□□□ -1.21
KDM3B-207ENST00000510866 FOXD4Q12950 439 aaPredicted RBP7.52□□□□□ -1.21
KDM3B-207ENST00000510866 MDH1BQ5I0G3 518 aa7.52□□□□□ -1.21
KDM3B-207ENST00000510866 TINF2Q9BSI4 451 aa7.52□□□□□ -1.21
KDM3B-207ENST00000510866 MRIQ9BWK5 157 aa7.52□□□□□ -1.21
KDM3B-207ENST00000510866 IGFLR1Q9H665 355 aa7.52□□□□□ -1.21
KDM3B-207ENST00000510866 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms