RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 GKN1Q9NS71 199 aa11.91□□□□□ -0.5
SNF8-207ENST00000509995 KIAA1522Q9P206 1035 aaPredicted RBP11.91□□□□□ -0.5
SNF8-207ENST00000509995 AFF4Q9UHB7 1163 aaKnown RBP11.91□□□□□ -0.5
SNF8-207ENST00000509995 FBXL5Q9UKA1 691 aa11.91□□□□□ -0.5
SNF8-207ENST00000509995 MAFFQ9ULX9 164 aa11.91□□□□□ -0.5
SNF8-207ENST00000509995 YIPF1Q9Y548 306 aa11.91□□□□□ -0.5
SNF8-207ENST00000509995 RELNP78509 3460 aa11.9□□□□□ -0.5
SNF8-207ENST00000509995 KNTC1P50748 2209 aa11.9□□□□□ -0.5
SNF8-207ENST00000509995 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.9□□□□□ -0.5
SNF8-207ENST00000509995 ARHGAP33O14559 1287 aa11.9□□□□□ -0.5
SNF8-207ENST00000509995 TBX3O15119 743 aa11.9□□□□□ -0.5
SNF8-207ENST00000509995 GJB3O75712 270 aa11.9□□□□□ -0.5
SNF8-207ENST00000509995 WISP1O95388 367 aa11.9□□□□□ -0.5
SNF8-207ENST00000509995 U2AF2P26368 475 aaKnown RBP eCLIP11.9□□□□□ -0.58e-7■□□□□ 10.3
SNF8-207ENST00000509995 WEE1P30291 646 aa11.9□□□□□ -0.5
SNF8-207ENST00000509995 P2RY2P41231 377 aa11.9□□□□□ -0.5
SNF8-207ENST00000509995 LIFRP42702 1097 aa11.9□□□□□ -0.5
SNF8-207ENST00000509995 GALK1P51570 392 aa11.9□□□□□ -0.5
SNF8-207ENST00000509995 POU5F1BQ06416 359 aa11.9□□□□□ -0.5
SNF8-207ENST00000509995 CAMK2BQ13554 666 aa11.9□□□□□ -0.5
SNF8-207ENST00000509995 TFDP1Q14186 410 aa11.9□□□□□ -0.5
SNF8-207ENST00000509995 UPP1Q16831 310 aa11.9□□□□□ -0.5
SNF8-207ENST00000509995 GPR158Q5T848 1215 aa11.9□□□□□ -0.5
SNF8-207ENST00000509995 LMBRD2Q68DH5 695 aaPredicted RBP11.9□□□□□ -0.5
SNF8-207ENST00000509995 TRIM68Q6AZZ1 485 aa11.9□□□□□ -0.5
SNF8-207ENST00000509995 GAREM2Q75VX8 874 aa11.9□□□□□ -0.5
SNF8-207ENST00000509995 MARCH9Q86YJ5 346 aa11.9□□□□□ -0.5
SNF8-207ENST00000509995 PIAS4Q8N2W9 510 aaPredicted RBP11.9□□□□□ -0.5
SNF8-207ENST00000509995 FAM181AQ8N9Y4 354 aa11.9□□□□□ -0.5
SNF8-207ENST00000509995 CCDC136Q96JN2 1154 aa11.9□□□□□ -0.5
SNF8-207ENST00000509995 TMEM87BQ96K49 555 aa11.9□□□□□ -0.5
SNF8-207ENST00000509995 DNAJC25Q9H1X3 360 aa11.9□□□□□ -0.5
SNF8-207ENST00000509995 EBF3Q9H4W6 596 aa11.9□□□□□ -0.5
SNF8-207ENST00000509995 STK24Q9Y6E0 443 aa11.9□□□□□ -0.5
SNF8-207ENST00000509995 V9GY48 417 aaPredicted RBP11.9□□□□□ -0.5
SNF8-207ENST00000509995 DENND4CQ5VZ89 1909 aa11.9□□□□□ -0.51
SNF8-207ENST00000509995 ESYT2A0FGR8 921 aa11.89□□□□□ -0.51
SNF8-207ENST00000509995 H7C4K7 107 aa11.89□□□□□ -0.51
SNF8-207ENST00000509995 SYN3O14994 580 aa11.89□□□□□ -0.51
SNF8-207ENST00000509995 EDIL3O43854 480 aa11.89□□□□□ -0.51
SNF8-207ENST00000509995 CBFA2T3O75081 653 aa11.89□□□□□ -0.51
SNF8-207ENST00000509995 PTH1RQ03431 593 aa11.89□□□□□ -0.51
SNF8-207ENST00000509995 PSMD2Q13200 908 aa11.89□□□□□ -0.51
SNF8-207ENST00000509995 PLD1Q13393 1074 aa11.89□□□□□ -0.51
SNF8-207ENST00000509995 CAPSQ13938 189 aa11.89□□□□□ -0.51
SNF8-207ENST00000509995 GLRA4Q5JXX5 417 aa11.89□□□□□ -0.51
SNF8-207ENST00000509995 RABEPKQ7Z6M1 372 aa11.89□□□□□ -0.51
SNF8-207ENST00000509995 RLN3Q8WXF3 142 aa11.89□□□□□ -0.51
SNF8-207ENST00000509995 EXOC4Q96A65 974 aa11.89□□□□□ -0.51
SNF8-207ENST00000509995 UROC1Q96N76 676 aa11.89□□□□□ -0.51
SNF8-207ENST00000509995 MTRQ99707 1265 aa11.89□□□□□ -0.51
SNF8-207ENST00000509995 NFKBIZQ9BYH8 718 aa11.89□□□□□ -0.51
SNF8-207ENST00000509995 ZMYND12Q9H0C1 365 aa11.89□□□□□ -0.51
SNF8-207ENST00000509995 ATXN3LQ9H3M9 355 aa11.89□□□□□ -0.51
SNF8-207ENST00000509995 CIZ1Q9ULV3 898 aaPredicted RBP11.89□□□□□ -0.51
SNF8-207ENST00000509995 TBX20Q9UMR3 447 aa11.89□□□□□ -0.51
SNF8-207ENST00000509995 ANKRD17O75179 2603 aaKnown RBP11.89□□□□□ -0.51
SNF8-207ENST00000509995 SYPP08247 313 aa11.88□□□□□ -0.51
SNF8-207ENST00000509995 MCM5P33992 734 aa11.88□□□□□ -0.51
SNF8-207ENST00000509995 QARSP47897 775 aaKnown RBP11.88□□□□□ -0.51
SNF8-207ENST00000509995 MRPL58Q14197 206 aaKnown RBP11.88□□□□□ -0.51
SNF8-207ENST00000509995 CTXN3Q4LDR2 81 aa11.88□□□□□ -0.51
SNF8-207ENST00000509995 ARHGAP15Q53QZ3 475 aa11.88□□□□□ -0.51
SNF8-207ENST00000509995 GPR155Q7Z3F1 870 aa11.88□□□□□ -0.51
SNF8-207ENST00000509995 FRMD1Q8N878 549 aa11.88□□□□□ -0.51
SNF8-207ENST00000509995 PDCD7Q8N8D1 485 aaKnown RBP11.88□□□□□ -0.51
SNF8-207ENST00000509995 PPP1R10Q96QC0 940 aaKnown RBP11.88□□□□□ -0.51
SNF8-207ENST00000509995 LNPKQ9C0E8 428 aa11.88□□□□□ -0.51
SNF8-207ENST00000509995 SMG9Q9H0W8 520 aaKnown RBP11.88□□□□□ -0.51
SNF8-207ENST00000509995 GOLGA2P5Q9HBQ8 144 aa11.88□□□□□ -0.51
SNF8-207ENST00000509995 XPNPEP1Q9NQW7 623 aa11.88□□□□□ -0.51
SNF8-207ENST00000509995 RBM28Q9NW13 759 aaKnown RBP11.88□□□□□ -0.51
SNF8-207ENST00000509995 WRAP73Q9P2S5 460 aaPredicted RBP11.88□□□□□ -0.51
SNF8-207ENST00000509995 UBR5O95071 2799 aaPredicted RBP11.88□□□□□ -0.51
SNF8-207ENST00000509995 ERVH48-1M5A8F1 160 aa11.87□□□□□ -0.51
SNF8-207ENST00000509995 DKC1O60832 514 aaKnown RBP eCLIP11.87□□□□□ -0.51
SNF8-207ENST00000509995 DKK1O94907 266 aa11.87□□□□□ -0.51
SNF8-207ENST00000509995 FGF19O95750 216 aa11.87□□□□□ -0.51
SNF8-207ENST00000509995 CPB1P15086 417 aa11.87□□□□□ -0.51
SNF8-207ENST00000509995 ARSAP15289 507 aa11.87□□□□□ -0.51
SNF8-207ENST00000509995 GABRR2P28476 465 aa11.87□□□□□ -0.51
SNF8-207ENST00000509995 GJA4P35212 333 aa11.87□□□□□ -0.51
SNF8-207ENST00000509995 EIF2S3P41091 472 aaKnown RBP11.87□□□□□ -0.51
SNF8-207ENST00000509995 EPHB3P54753 998 aa11.87□□□□□ -0.51
SNF8-207ENST00000509995 NBR1Q14596 966 aa11.87□□□□□ -0.51
SNF8-207ENST00000509995 ZNF280DQ6N043 979 aa11.87□□□□□ -0.51
SNF8-207ENST00000509995 RNF19BQ6ZMZ0 732 aa11.87□□□□□ -0.51
SNF8-207ENST00000509995 LRRC69Q6ZNQ3 347 aa11.87□□□□□ -0.51
SNF8-207ENST00000509995 TTC30AQ86WT1 665 aa11.87□□□□□ -0.51
SNF8-207ENST00000509995 GALNT15Q8N3T1 639 aa11.87□□□□□ -0.51
SNF8-207ENST00000509995 ASAP3Q8TDY4 903 aa11.87□□□□□ -0.51
SNF8-207ENST00000509995 WHAMMQ8TF30 809 aa11.87□□□□□ -0.51
SNF8-207ENST00000509995 CD101Q93033 1021 aa11.87□□□□□ -0.51
SNF8-207ENST00000509995 TBC1D32Q96NH3 1257 aa11.87□□□□□ -0.51
SNF8-207ENST00000509995 TASP1Q9H6P5 420 aa11.87□□□□□ -0.51
SNF8-207ENST00000509995 C6orf50Q9HD87 102 aa11.87□□□□□ -0.51
SNF8-207ENST00000509995 TOR4AQ9NXH8 423 aa11.87□□□□□ -0.51
SNF8-207ENST00000509995 DNMT3LQ9UJW3 386 aa11.87□□□□□ -0.51
SNF8-207ENST00000509995 RCAN3Q9UKA8 241 aa11.87□□□□□ -0.51
SNF8-207ENST00000509995 PCOLCE2Q9UKZ9 415 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms