RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 TMEM132DQ14C87 1099 aa9.82□□□□□ -0.84
HTT-205ENST00000509043 SEZ6Q53EL9 994 aa9.82□□□□□ -0.84
HTT-205ENST00000509043 EEF1DP3Q658K8 133 aa9.82□□□□□ -0.84
HTT-205ENST00000509043 DUPD1Q68J44 220 aa9.82□□□□□ -0.84
HTT-205ENST00000509043 JAMLQ86YT9 394 aa9.82□□□□□ -0.84
HTT-205ENST00000509043 GSPT2Q8IYD1 628 aaKnown RBP9.82□□□□□ -0.84
HTT-205ENST00000509043 NIPA2Q8N8Q9 360 aa9.82□□□□□ -0.84
HTT-205ENST00000509043 PRELID2Q8N945 189 aa9.82□□□□□ -0.84
HTT-205ENST00000509043 EXD1Q8NHP7 514 aa9.82□□□□□ -0.84
HTT-205ENST00000509043 FNIP1Q8TF40 1166 aa9.82□□□□□ -0.84
HTT-205ENST00000509043 SOCS4Q8WXH5 440 aa9.82□□□□□ -0.84
HTT-205ENST00000509043 MAGOHBQ96A72 148 aaKnown RBP9.82□□□□□ -0.84
HTT-205ENST00000509043 RBM41Q96IZ5 413 aaKnown RBP9.82□□□□□ -0.84
HTT-205ENST00000509043 SCLT1Q96NL6 688 aa9.82□□□□□ -0.84
HTT-205ENST00000509043 ACAP3Q96P50 834 aa9.82□□□□□ -0.84
HTT-205ENST00000509043 PTPN18Q99952 460 aa9.82□□□□□ -0.84
HTT-205ENST00000509043 C11orf70Q9BRQ4 267 aa9.82□□□□□ -0.84
HTT-205ENST00000509043 MINDY3Q9H8M7 445 aa9.82□□□□□ -0.84
HTT-205ENST00000509043 MTRF1LQ9UGC7 380 aaKnown RBP9.82□□□□□ -0.84
HTT-205ENST00000509043 FAN1Q9Y2M0 1017 aa9.82□□□□□ -0.84
HTT-205ENST00000509043 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.82□□□□□ -0.84
HTT-205ENST00000509043 UMODL1Q5DID0 1318 aa9.82□□□□□ -0.84
HTT-205ENST00000509043 ESYT3A0FGR9 886 aa9.81□□□□□ -0.84
HTT-205ENST00000509043 GOLGA6CA6NDK9 693 aa9.81□□□□□ -0.84
HTT-205ENST00000509043 TMEM191CA6NGB0 347 aa9.81□□□□□ -0.84
HTT-205ENST00000509043 LACTBL1A8MY62 500 aa9.81□□□□□ -0.84
HTT-205ENST00000509043 TLR3O15455 904 aaKnown RBP9.81□□□□□ -0.84
HTT-205ENST00000509043 TTI1O43156 1089 aa9.81□□□□□ -0.84
HTT-205ENST00000509043 GAS8O95995 478 aa9.81□□□□□ -0.84
HTT-205ENST00000509043 HMGCRP04035 888 aa9.81□□□□□ -0.84
HTT-205ENST00000509043 WEE2P0C1S8 567 aa9.81□□□□□ -0.84
HTT-205ENST00000509043 ZNF286BP0CG31 522 aa9.81□□□□□ -0.84
HTT-205ENST00000509043 GOLGA6DP0CG33 693 aa9.81□□□□□ -0.84
HTT-205ENST00000509043 ATXN8OSP0DMR3 200 aa9.81□□□□□ -0.84
HTT-205ENST00000509043 GNAT1P11488 350 aa9.81□□□□□ -0.84
HTT-205ENST00000509043 ECHS1P30084 290 aa9.81□□□□□ -0.84
HTT-205ENST00000509043 PTPN7P35236 360 aa9.81□□□□□ -0.84
HTT-205ENST00000509043 COILP38432 576 aaPredicted RBP9.81□□□□□ -0.84
HTT-205ENST00000509043 RGS2P41220 211 aa9.81□□□□□ -0.84
HTT-205ENST00000509043 SNX16P57768 344 aa9.81□□□□□ -0.84
HTT-205ENST00000509043 INCA1Q0VD86 236 aa9.81□□□□□ -0.84
HTT-205ENST00000509043 MYO1EQ12965 1108 aa9.81□□□□□ -0.84
HTT-205ENST00000509043 ZNF211Q13398 564 aaPredicted RBP9.81□□□□□ -0.84
HTT-205ENST00000509043 ACAP1Q15027 740 aa9.81□□□□□ -0.84
HTT-205ENST00000509043 PTPROQ16827 1216 aa9.81□□□□□ -0.84
HTT-205ENST00000509043 MARCH8Q5T0T0 291 aa9.81□□□□□ -0.84
HTT-205ENST00000509043 EMC10Q5UCC4 262 aa9.81□□□□□ -0.84
HTT-205ENST00000509043 DNAJC24Q6P3W2 148 aa9.81□□□□□ -0.84
HTT-205ENST00000509043 NOTUMQ6P988 496 aa9.81□□□□□ -0.84
HTT-205ENST00000509043 SLC27A1Q6PCB7 646 aa9.81□□□□□ -0.84
HTT-205ENST00000509043 CCDC137Q6PK04 289 aaKnown RBP9.81□□□□□ -0.84
HTT-205ENST00000509043 RUFY4Q6ZNE9 571 aa9.81□□□□□ -0.84
HTT-205ENST00000509043 MMS22LQ6ZRQ5 1243 aa9.81□□□□□ -0.84
HTT-205ENST00000509043 CEP128Q6ZU80 1094 aa9.81□□□□□ -0.84
HTT-205ENST00000509043 ZNF771Q7L3S4 317 aaPredicted RBP9.81□□□□□ -0.84
HTT-205ENST00000509043 POLNQ7Z5Q5 900 aa9.81□□□□□ -0.84
HTT-205ENST00000509043 ERICH1Q86X53 443 aa9.81□□□□□ -0.84
HTT-205ENST00000509043 RCOR2Q8IZ40 523 aa9.81□□□□□ -0.84
HTT-205ENST00000509043 KIAA0319LQ8IZA0 1049 aa9.81□□□□□ -0.84
HTT-205ENST00000509043 NME8Q8N427 588 aa9.81□□□□□ -0.84
HTT-205ENST00000509043 C1orf127Q8N9H9 656 aa9.81□□□□□ -0.84
HTT-205ENST00000509043 BBOF1Q8ND07 529 aa9.81□□□□□ -0.84
HTT-205ENST00000509043 C3orf20Q8ND61 904 aa9.81□□□□□ -0.84
HTT-205ENST00000509043 FAM76AQ8TAV0 307 aa9.81□□□□□ -0.84
HTT-205ENST00000509043 CCHCR1Q8TD31 782 aa9.81□□□□□ -0.84
HTT-205ENST00000509043 DDX27Q96GQ7 796 aaKnown RBP9.81□□□□□ -0.84
HTT-205ENST00000509043 FMO2Q99518 471 aa9.81□□□□□ -0.84
HTT-205ENST00000509043 FRMD8P1Q9BZ68 369 aaPredicted RBP9.81□□□□□ -0.84
HTT-205ENST00000509043 ST7Q9NRC1 585 aa9.81□□□□□ -0.84
HTT-205ENST00000509043 DDX56Q9NY93 547 aaKnown RBP9.81□□□□□ -0.84
HTT-205ENST00000509043 GOLGA6AQ9NYA3 693 aa9.81□□□□□ -0.84
HTT-205ENST00000509043 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.81□□□□□ -0.84
HTT-205ENST00000509043 GNEQ9Y223 722 aaKnown RBP9.81□□□□□ -0.84
HTT-205ENST00000509043 EFR3BQ9Y2G0 817 aa9.81□□□□□ -0.84
HTT-205ENST00000509043 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.8□□□□□ -0.84
HTT-205ENST00000509043 TCRBV5S1A1TA0A578 114 aa9.8□□□□□ -0.84
HTT-205ENST00000509043 HMGB1P1B2RPK0 211 aaPredicted RBP9.8□□□□□ -0.84
HTT-205ENST00000509043 DAPK3O43293 454 aa9.8□□□□□ -0.84
HTT-205ENST00000509043 XPOTO43592 962 aaKnown RBP9.8□□□□□ -0.84
HTT-205ENST00000509043 PPFIA2O75334 1257 aa9.8□□□□□ -0.84
HTT-205ENST00000509043 CILPO75339 1184 aa9.8□□□□□ -0.84
HTT-205ENST00000509043 ECEL1O95672 775 aa9.8□□□□□ -0.84
HTT-205ENST00000509043 VTNP04004 478 aa9.8□□□□□ -0.84
HTT-205ENST00000509043 NFICP08651 508 aa9.8□□□□□ -0.84
HTT-205ENST00000509043 KRT19P08727 400 aa9.8□□□□□ -0.84
HTT-205ENST00000509043 IQCF3P0C7M6 154 aa9.8□□□□□ -0.84
HTT-205ENST00000509043 VDRP11473 427 aa9.8□□□□□ -0.84
HTT-205ENST00000509043 ATF7P17544 494 aaPredicted RBP9.8□□□□□ -0.84
HTT-205ENST00000509043 CD58P19256 250 aa9.8□□□□□ -0.84
HTT-205ENST00000509043 PTGIRP43119 386 aa9.8□□□□□ -0.84
HTT-205ENST00000509043 MARCKSL1P49006 195 aa9.8□□□□□ -0.84
HTT-205ENST00000509043 YARSP54577 528 aaKnown RBP9.8□□□□□ -0.84
HTT-205ENST00000509043 HUNKP57058 714 aa9.8□□□□□ -0.84
HTT-205ENST00000509043 ZNF268Q14587 947 aaPredicted RBP9.8□□□□□ -0.84
HTT-205ENST00000509043 SLMAPQ14BN4 828 aa9.8□□□□□ -0.84
HTT-205ENST00000509043 CNGA2Q16280 664 aa9.8□□□□□ -0.84
HTT-205ENST00000509043 SLC10A6Q3KNW5 377 aa9.8□□□□□ -0.84
HTT-205ENST00000509043 WDR72Q3MJ13 1102 aa9.8□□□□□ -0.84
HTT-205ENST00000509043 PPP1R15BQ5SWA1 713 aa9.8□□□□□ -0.84
HTT-205ENST00000509043 TMEM63BQ5T3F8 832 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms