RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 LMBR1LQ6UX01 489 aa4.15□□□□□ -1.75
NEDD4-209ENST00000508871 UXS1Q8NBZ7 420 aa4.15□□□□□ -1.75
NEDD4-209ENST00000508871 HIPK4Q8NE63 616 aa4.15□□□□□ -1.75
NEDD4-209ENST00000508871 OR8H1Q8NGG4 311 aa4.15□□□□□ -1.75
NEDD4-209ENST00000508871 RASGRP4Q8TDF6 673 aa4.15□□□□□ -1.75
NEDD4-209ENST00000508871 PDCD6IPQ8WUM4 868 aaKnown RBP4.15□□□□□ -1.75
NEDD4-209ENST00000508871 GTF3C6Q969F1 213 aa4.15□□□□□ -1.75
NEDD4-209ENST00000508871 RAB24Q969Q5 203 aa4.15□□□□□ -1.75
NEDD4-209ENST00000508871 NLRP4Q96MN2 994 aa4.15□□□□□ -1.75
NEDD4-209ENST00000508871 PPP1R16BQ96T49 567 aa4.15□□□□□ -1.75
NEDD4-209ENST00000508871 B3GNT5Q9BYG0 378 aa4.15□□□□□ -1.75
NEDD4-209ENST00000508871 SLC13A1Q9BZW2 595 aa4.15□□□□□ -1.75
NEDD4-209ENST00000508871 ZNF304Q9HCX3 659 aa4.15□□□□□ -1.75
NEDD4-209ENST00000508871 ATP8A2Q9NTI2 1148 aa4.15□□□□□ -1.75
NEDD4-209ENST00000508871 MTRF1LQ9UGC7 380 aaKnown RBP4.15□□□□□ -1.75
NEDD4-209ENST00000508871 ANGPTL2Q9UKU9 493 aa4.15□□□□□ -1.75
NEDD4-209ENST00000508871 PPM1HQ9ULR3 514 aa4.15□□□□□ -1.75
NEDD4-209ENST00000508871 USP18Q9UMW8 372 aa4.15□□□□□ -1.75
NEDD4-209ENST00000508871 GSG1L2A8MUP6 293 aa4.15□□□□□ -1.75
NEDD4-209ENST00000508871 A8MVJ9 347 aa4.15□□□□□ -1.75
NEDD4-209ENST00000508871 H7C0S8 307 aa4.15□□□□□ -1.75
NEDD4-209ENST00000508871 TRPA1O75762 1119 aa4.15□□□□□ -1.75
NEDD4-209ENST00000508871 PCCAP05165 728 aaPredicted RBP4.15□□□□□ -1.75
NEDD4-209ENST00000508871 VIL1P09327 827 aaKnown RBP4.15□□□□□ -1.75
NEDD4-209ENST00000508871 PCP11498 1178 aaKnown RBP4.15□□□□□ -1.75
NEDD4-209ENST00000508871 ALDH5A1P51649 535 aaPredicted RBP4.15□□□□□ -1.75
NEDD4-209ENST00000508871 MNAT1P51948 309 aa4.15□□□□□ -1.75
NEDD4-209ENST00000508871 BMPR2Q13873 1038 aa4.15□□□□□ -1.75
NEDD4-209ENST00000508871 COTL1Q14019 142 aa4.15□□□□□ -1.75
NEDD4-209ENST00000508871 PROSER3Q2NL68 480 aa4.15□□□□□ -1.75
NEDD4-209ENST00000508871 ARSIQ5FYB1 569 aa4.15□□□□□ -1.75
NEDD4-209ENST00000508871 PRAMEF9Q5VWM5 478 aa4.15□□□□□ -1.75
NEDD4-209ENST00000508871 LHFPL2Q6ZUX7 228 aa4.15□□□□□ -1.75
NEDD4-209ENST00000508871 PLEKHM3Q6ZWE6 761 aa4.15□□□□□ -1.75
NEDD4-209ENST00000508871 SV2BQ7L1I2 683 aa4.15□□□□□ -1.75
NEDD4-209ENST00000508871 SLC41A1Q8IVJ1 513 aa4.15□□□□□ -1.75
NEDD4-209ENST00000508871 PPIL6Q8IXY8 311 aa4.15□□□□□ -1.75
NEDD4-209ENST00000508871 DIS3L2Q8IYB7 885 aaKnown RBP4.15□□□□□ -1.75
NEDD4-209ENST00000508871 CEP112Q8N8E3 955 aa4.15□□□□□ -1.75
NEDD4-209ENST00000508871 FAM81AQ8TBF8 368 aa4.15□□□□□ -1.75
NEDD4-209ENST00000508871 UBLCP1Q8WVY7 318 aaPredicted RBP4.15□□□□□ -1.75
NEDD4-209ENST00000508871 SHC3Q92529 594 aa4.15□□□□□ -1.75
NEDD4-209ENST00000508871 SHDQ96IW2 340 aa4.15□□□□□ -1.75
NEDD4-209ENST00000508871 NACA2Q9H009 215 aa4.15□□□□□ -1.75
NEDD4-209ENST00000508871 EPB41L4AQ9HCS5 686 aaPredicted RBP4.15□□□□□ -1.75
NEDD4-209ENST00000508871 OBP2BQ9NPH6 170 aa4.15□□□□□ -1.75
NEDD4-209ENST00000508871 ENAMQ9NRM1 1142 aa4.15□□□□□ -1.75
NEDD4-209ENST00000508871 PCDHGA11Q9Y5H2 935 aa4.15□□□□□ -1.75
NEDD4-209ENST00000508871 TNRC6CQ9HCJ0 1690 aaKnown RBP4.14□□□□□ -1.75
NEDD4-209ENST00000508871 TMEM238LA0A1B0GVL6 79 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 MYO1GB0I1T2 1018 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 NCAM2O15394 837 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 ZSCAN9O15535 394 aaPredicted RBP4.14□□□□□ -1.75
NEDD4-209ENST00000508871 CDKL5O76039 1030 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 SLC10A3P09131 477 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 HNRNPA1P09651 372 aaKnown RBP eCLIP4.14□□□□□ -1.75
NEDD4-209ENST00000508871 PABPC1P11940 636 aaKnown RBP4.14□□□□□ -1.75
NEDD4-209ENST00000508871 HOXC8P31273 242 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 MAP3K7CLP57077 242 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 UBE3AQ05086 875 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 POSTNQ15063 836 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 TBCCQ15814 346 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 EFHC2Q5JST6 749 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 THEMIS2Q5TEJ8 643 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 PDXDC1Q6P996 788 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 MAMSTRQ6ZN01 415 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 TRMT10CQ7L0Y3 403 aaKnown RBP4.14□□□□□ -1.75
NEDD4-209ENST00000508871 GPRIN1Q7Z2K8 1008 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 DCLK2Q8N568 766 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 FOXJ1Q92949 421 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 XAGE2Q96GT9 111 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 PCYT2Q99447 389 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 EYA3Q99504 573 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 HGH1Q9BTY7 390 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 PUS3Q9BZE2 481 aaKnown RBP4.14□□□□□ -1.75
NEDD4-209ENST00000508871 GPR63Q9BZJ6 419 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 TRNAU1APQ9NX07 287 aaKnown RBP4.14□□□□□ -1.75
NEDD4-209ENST00000508871 TMOD4Q9NZQ9 345 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 ZNF70Q9UC06 446 aaPredicted RBP4.14□□□□□ -1.75
NEDD4-209ENST00000508871 GTF2IRD1Q9UHL9 959 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 HPS5Q9UPZ3 1129 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 PCDHB5Q9Y5E4 795 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 TACC3Q9Y6A5 838 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 CCDC88AQ3V6T2 1871 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 FOCADQ5VW36 1801 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 A0A0U1RQK1 487 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 ZNF320A2RRD8 509 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 A6NL46 340 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 E7EVH7 732 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 KCNK3O14649 394 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 SPTLC2O15270 562 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 EXOC3O60645 756 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 SASH3O75995 380 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 GLRX3O76003 335 aaKnown RBP4.14□□□□□ -1.75
NEDD4-209ENST00000508871 RASAL1O95294 804 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 ADH7P40394 386 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 CRKP46108 304 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 ATP11AP98196 1134 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 NOMO1Q15155 1222 aa4.14□□□□□ -1.75
NEDD4-209ENST00000508871 C2orf76Q3KRA6 126 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms