RNA–Protein interactions for RNA: ENST00000508580.1

DDX4-208, Transcript of DEAD-box helicase 4, humanhuman

TSL 2

Gene DDX4, Length 600 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4-208ENST00000508580 RUNDC1Q96C34 613 aa4.68□□□□□ -1.66
DDX4-208ENST00000508580 CHMP4CQ96CF2 233 aa4.68□□□□□ -1.66
DDX4-208ENST00000508580 HOOK2Q96ED9 719 aa4.68□□□□□ -1.66
DDX4-208ENST00000508580 PTCD3Q96EY7 689 aaKnown RBP4.68□□□□□ -1.66
DDX4-208ENST00000508580 ZNF764Q96H86 408 aaPredicted RBP4.68□□□□□ -1.66
DDX4-208ENST00000508580 FAXDC2Q96IV6 333 aa4.68□□□□□ -1.66
DDX4-208ENST00000508580 RTFDC1Q9BY42 306 aaPredicted RBP4.68□□□□□ -1.66
DDX4-208ENST00000508580 ZHX3Q9H4I2 956 aa4.68□□□□□ -1.66
DDX4-208ENST00000508580 MANSC1Q9H8J5 431 aa4.68□□□□□ -1.66
DDX4-208ENST00000508580 NRBP1Q9UHY1 535 aa4.68□□□□□ -1.66
DDX4-208ENST00000508580 LZTS1Q9Y250 596 aa4.68□□□□□ -1.66
DDX4-208ENST00000508580 MTO1Q9Y2Z2 717 aaKnown RBP4.68□□□□□ -1.66
DDX4-208ENST00000508580 INSL6Q9Y581 213 aa4.68□□□□□ -1.66
DDX4-208ENST00000508580 PCDHGA9Q9Y5G4 932 aaKnown RBP4.68□□□□□ -1.66
DDX4-208ENST00000508580 PCDHGA8Q9Y5G5 932 aa4.68□□□□□ -1.66
DDX4-208ENST00000508580 PCDHGA7Q9Y5G6 932 aa4.68□□□□□ -1.66
DDX4-208ENST00000508580 PCDHGA6Q9Y5G7 932 aa4.68□□□□□ -1.66
DDX4-208ENST00000508580 PCDHGA3Q9Y5H0 932 aa4.68□□□□□ -1.66
DDX4-208ENST00000508580 TNFRSF18Q9Y5U5 241 aa4.68□□□□□ -1.66
DDX4-208ENST00000508580 COX11Q9Y6N1 276 aa4.68□□□□□ -1.66
DDX4-208ENST00000508580 CDHR4A6H8M9 788 aa4.67□□□□□ -1.66
DDX4-208ENST00000508580 MYADML2A6NDP7 307 aa4.67□□□□□ -1.66
DDX4-208ENST00000508580 FAM171A2A8MVW0 826 aa4.67□□□□□ -1.66
DDX4-208ENST00000508580 MASP2O00187 686 aa4.67□□□□□ -1.66
DDX4-208ENST00000508580 TEX33O43247 280 aa4.67□□□□□ -1.66
DDX4-208ENST00000508580 SBK3P0C264 359 aa4.67□□□□□ -1.66
DDX4-208ENST00000508580 TRAPPC10P48553 1259 aa4.67□□□□□ -1.66
DDX4-208ENST00000508580 RARRES1P49788 294 aa4.67□□□□□ -1.66
DDX4-208ENST00000508580 CTXN1P60606 82 aa4.67□□□□□ -1.66
DDX4-208ENST00000508580 SIM1P81133 766 aaPredicted RBP4.67□□□□□ -1.66
DDX4-208ENST00000508580 ITKQ08881 620 aa4.67□□□□□ -1.66
DDX4-208ENST00000508580 SLFN5Q08AF3 891 aa4.67□□□□□ -1.66
DDX4-208ENST00000508580 TARDBPQ13148 414 aaKnown RBP eCLIP4.67□□□□□ -1.66
DDX4-208ENST00000508580 DACT2Q5SW24 774 aa4.67□□□□□ -1.66
DDX4-208ENST00000508580 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.67□□□□□ -1.66
DDX4-208ENST00000508580 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.67□□□□□ -1.66
DDX4-208ENST00000508580 NUP133Q8WUM0 1156 aa4.67□□□□□ -1.66
DDX4-208ENST00000508580 VOPP1Q96AW1 172 aa4.67□□□□□ -1.66
DDX4-208ENST00000508580 PNKPQ96T60 521 aa4.67□□□□□ -1.66
DDX4-208ENST00000508580 SMAD5Q99717 465 aaKnown RBP4.67□□□□□ -1.66
DDX4-208ENST00000508580 AIFM2Q9BRQ8 373 aa4.67□□□□□ -1.66
DDX4-208ENST00000508580 INO80BQ9C086 356 aaPredicted RBP4.67□□□□□ -1.66
DDX4-208ENST00000508580 PUS7LQ9H0K6 701 aaKnown RBP4.67□□□□□ -1.66
DDX4-208ENST00000508580 CCDC8Q9H0W5 538 aaPredicted RBP4.67□□□□□ -1.66
DDX4-208ENST00000508580 RSAD1Q9HA92 442 aa4.67□□□□□ -1.66
DDX4-208ENST00000508580 PTPRHQ9HD43 1115 aa4.67□□□□□ -1.66
DDX4-208ENST00000508580 TBCCD1Q9NVR7 557 aa4.67□□□□□ -1.66
DDX4-208ENST00000508580 KCNE5Q9UJ90 142 aa4.67□□□□□ -1.66
DDX4-208ENST00000508580 TUBD1Q9UJT1 453 aa4.67□□□□□ -1.66
DDX4-208ENST00000508580 ZNF180Q9UJW8 692 aa4.67□□□□□ -1.66
DDX4-208ENST00000508580 NOB1Q9ULX3 412 aaKnown RBP4.67□□□□□ -1.66
DDX4-208ENST00000508580 NDUFS2O75306 463 aa4.66□□□□□ -1.66
DDX4-208ENST00000508580 RFPL1O75677 317 aa4.66□□□□□ -1.66
DDX4-208ENST00000508580 NBPF7P0C2Y1 421 aaPredicted RBP4.66□□□□□ -1.66
DDX4-208ENST00000508580 TRIM27P14373 513 aa4.66□□□□□ -1.66
DDX4-208ENST00000508580 C5AR1P21730 350 aa4.66□□□□□ -1.66
DDX4-208ENST00000508580 FBLP22087 321 aaKnown RBP4.66□□□□□ -1.66
DDX4-208ENST00000508580 EDNRBP24530 442 aa4.66□□□□□ -1.66
DDX4-208ENST00000508580 IARSP41252 1262 aaKnown RBP4.66□□□□□ -1.66
DDX4-208ENST00000508580 IL12RB1P42701 662 aa4.66□□□□□ -1.66
DDX4-208ENST00000508580 VAV2P52735 878 aa4.66□□□□□ -1.66
DDX4-208ENST00000508580 CREMQ03060 361 aa4.66□□□□□ -1.66
DDX4-208ENST00000508580 PICALMQ13492 652 aa4.66□□□□□ -1.66
DDX4-208ENST00000508580 IL10RAQ13651 578 aa4.66□□□□□ -1.66
DDX4-208ENST00000508580 ERCC6LQ2NKX8 1250 aa4.66□□□□□ -1.66
DDX4-208ENST00000508580 UTP14CQ5TAP6 766 aaKnown RBP4.66□□□□□ -1.66
DDX4-208ENST00000508580 RD3Q7Z3Z2 195 aa4.66□□□□□ -1.66
DDX4-208ENST00000508580 ZBTB46Q86UZ6 589 aa4.66□□□□□ -1.66
DDX4-208ENST00000508580 TEX19Q8NA77 164 aa4.66□□□□□ -1.66
DDX4-208ENST00000508580 C1orf162Q8NEQ5 155 aaPredicted RBP4.66□□□□□ -1.66
DDX4-208ENST00000508580 CAGE1Q8TC20 777 aa4.66□□□□□ -1.66
DDX4-208ENST00000508580 MTMR8Q96EF0 704 aa4.66□□□□□ -1.66
DDX4-208ENST00000508580 C11orf54Q9H0W9 315 aaPredicted RBP4.66□□□□□ -1.66
DDX4-208ENST00000508580 FOXJ2Q9P0K8 574 aa4.66□□□□□ -1.66
DDX4-208ENST00000508580 ZNF69Q9UC07 566 aa4.66□□□□□ -1.66
DDX4-208ENST00000508580 LIMCH1Q9UPQ0 1083 aa4.66□□□□□ -1.66
DDX4-208ENST00000508580 EIF4G1Q04637 1599 aaKnown RBP4.65□□□□□ -1.66
DDX4-208ENST00000508580 MGST3O14880 152 aa4.65□□□□□ -1.67
DDX4-208ENST00000508580 PRPF3O43395 683 aaKnown RBP4.65□□□□□ -1.67
DDX4-208ENST00000508580 ERN1O75460 977 aaKnown RBP4.65□□□□□ -1.67
DDX4-208ENST00000508580 MYL3P08590 195 aa4.65□□□□□ -1.67
DDX4-208ENST00000508580 FCER1AP12319 257 aa4.65□□□□□ -1.67
DDX4-208ENST00000508580 ALAS1P13196 640 aa4.65□□□□□ -1.67
DDX4-208ENST00000508580 HTR3AP46098 478 aa4.65□□□□□ -1.67
DDX4-208ENST00000508580 C21orf58P58505 322 aa4.65□□□□□ -1.67
DDX4-208ENST00000508580 ZNF280AP59817 542 aaPredicted RBP4.65□□□□□ -1.67
DDX4-208ENST00000508580 KRTAP1-1Q07627 177 aa4.65□□□□□ -1.67
DDX4-208ENST00000508580 ACAP2Q15057 778 aa4.65□□□□□ -1.67
DDX4-208ENST00000508580 GEN1Q17RS7 908 aa4.65□□□□□ -1.67
DDX4-208ENST00000508580 COLEC12Q5KU26 742 aa4.65□□□□□ -1.67
DDX4-208ENST00000508580 FAM83BQ5T0W9 1011 aa4.65□□□□□ -1.67
DDX4-208ENST00000508580 ERAP2Q6P179 960 aa4.65□□□□□ -1.67
DDX4-208ENST00000508580 SMAP1Q8IYB5 467 aaPredicted RBP4.65□□□□□ -1.67
DDX4-208ENST00000508580 LNX2Q8N448 690 aa4.65□□□□□ -1.67
DDX4-208ENST00000508580 SLC9A6Q92581 669 aa4.65□□□□□ -1.67
DDX4-208ENST00000508580 NAP1L5Q96NT1 182 aaPredicted RBP4.65□□□□□ -1.67
DDX4-208ENST00000508580 DMRTA2Q96SC8 542 aa4.65□□□□□ -1.67
DDX4-208ENST00000508580 LRFN3Q9BTN0 628 aa4.65□□□□□ -1.67
DDX4-208ENST00000508580 TLR10Q9BXR5 811 aa4.65□□□□□ -1.67
DDX4-208ENST00000508580 MKS1Q9NXB0 559 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms