RNA–Protein interactions for RNA: ENST00000508503.5

CLDND1-218, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 707 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-218ENST00000508503 NPAS3Q8IXF0 933 aa13.12□□□□□ -0.31
CLDND1-218ENST00000508503 SYCP3Q8IZU3 236 aa13.12□□□□□ -0.31
CLDND1-218ENST00000508503 SPRYD3Q8NCJ5 442 aa13.12□□□□□ -0.31
CLDND1-218ENST00000508503 HPS3Q969F9 1004 aa13.12□□□□□ -0.31
CLDND1-218ENST00000508503 RTP3Q9BQQ7 232 aa13.12□□□□□ -0.31
CLDND1-218ENST00000508503 PYM1Q9BRP8 204 aaKnown RBP13.12□□□□□ -0.31
CLDND1-218ENST00000508503 CRISPLD1Q9H336 500 aa13.12□□□□□ -0.31
CLDND1-218ENST00000508503 FAM13BQ9NYF5 915 aa13.12□□□□□ -0.31
CLDND1-218ENST00000508503 CEP72Q9P209 647 aa13.12□□□□□ -0.31
CLDND1-218ENST00000508503 DSEQ9UL01 958 aa13.12□□□□□ -0.31
CLDND1-218ENST00000508503 MRPS23Q9Y3D9 190 aaKnown RBP13.12□□□□□ -0.31
CLDND1-218ENST00000508503 NUMBLQ9Y6R0 609 aa13.12□□□□□ -0.31
CLDND1-218ENST00000508503 FAM237AA0A1B0GTK4 181 aa13.11□□□□□ -0.31
CLDND1-218ENST00000508503 KRBA1A5PL33 1030 aa13.11□□□□□ -0.31
CLDND1-218ENST00000508503 KPNA7A9QM74 516 aa13.11□□□□□ -0.31
CLDND1-218ENST00000508503 CYB561D2O14569 222 aa13.11□□□□□ -0.31
CLDND1-218ENST00000508503 ZNF197O14709 1029 aa13.11□□□□□ -0.31
CLDND1-218ENST00000508503 TGFB1I1O43294 461 aa13.11□□□□□ -0.31
CLDND1-218ENST00000508503 MOSPD3O75425 235 aa13.11□□□□□ -0.31
CLDND1-218ENST00000508503 SLFN14P0C7P3 912 aa13.11□□□□□ -0.31
CLDND1-218ENST00000508503 CMA1P23946 247 aa13.11□□□□□ -0.31
CLDND1-218ENST00000508503 TAF6P49848 677 aa13.11□□□□□ -0.31
CLDND1-218ENST00000508503 SNRPFP62306 86 aaKnown RBP13.11□□□□□ -0.31
CLDND1-218ENST00000508503 TCF15Q12870 199 aa13.11□□□□□ -0.31
CLDND1-218ENST00000508503 FAM26FQ5R3K3 315 aa13.11□□□□□ -0.31
CLDND1-218ENST00000508503 MTSS1LQ765P7 747 aa13.11□□□□□ -0.31
CLDND1-218ENST00000508503 GPD1LQ8N335 351 aa13.11□□□□□ -0.31
CLDND1-218ENST00000508503 TMEM105Q8N8V8 129 aa13.11□□□□□ -0.31
CLDND1-218ENST00000508503 C1orf127Q8N9H9 656 aa13.11□□□□□ -0.31
CLDND1-218ENST00000508503 CACTINQ8WUQ7 758 aaKnown RBP13.11□□□□□ -0.31
CLDND1-218ENST00000508503 LEO1Q8WVC0 666 aaPredicted RBP13.11□□□□□ -0.31
CLDND1-218ENST00000508503 SAAL1Q96ER3 474 aa13.11□□□□□ -0.31
CLDND1-218ENST00000508503 ZNF512Q96ME7 567 aaPredicted RBP13.11□□□□□ -0.31
CLDND1-218ENST00000508503 LRRC3Q9BY71 257 aa13.11□□□□□ -0.31
CLDND1-218ENST00000508503 KIAA1586Q9HCI6 787 aa13.11□□□□□ -0.31
CLDND1-218ENST00000508503 RBAKQ9NYW8 714 aaPredicted RBP13.11□□□□□ -0.31
CLDND1-218ENST00000508503 ZNF233A6NK53 670 aa13.1□□□□□ -0.31
CLDND1-218ENST00000508503 ACTN4O43707 911 aaKnown RBP13.1□□□□□ -0.31
CLDND1-218ENST00000508503 CPB1P15086 417 aa13.1□□□□□ -0.31
CLDND1-218ENST00000508503 AOC1P19801 751 aa13.1□□□□□ -0.31
CLDND1-218ENST00000508503 PNPLA4P41247 253 aa13.1□□□□□ -0.31
CLDND1-218ENST00000508503 CCR2P41597 374 aa13.1□□□□□ -0.31
CLDND1-218ENST00000508503 PTPN5P54829 565 aa13.1□□□□□ -0.31
CLDND1-218ENST00000508503 ASIC1P78348 528 aa13.1□□□□□ -0.31
CLDND1-218ENST00000508503 DUSP4Q13115 394 aa13.1□□□□□ -0.31
CLDND1-218ENST00000508503 BMT2Q1RMZ1 405 aa13.1□□□□□ -0.31
CLDND1-218ENST00000508503 CWF19L1Q69YN2 538 aaKnown RBP13.1□□□□□ -0.31
CLDND1-218ENST00000508503 SCARA3Q6AZY7 606 aa13.1□□□□□ -0.31
CLDND1-218ENST00000508503 PHLDB3Q6NSJ2 640 aa13.1□□□□□ -0.31
CLDND1-218ENST00000508503 ARMCX5Q6P1M9 558 aa13.1□□□□□ -0.31
CLDND1-218ENST00000508503 LIMS2Q7Z4I7 341 aa13.1□□□□□ -0.31
CLDND1-218ENST00000508503 LRRC52Q8N7C0 313 aa13.1□□□□□ -0.31
CLDND1-218ENST00000508503 LEMD2Q8NC56 503 aa13.1□□□□□ -0.31
CLDND1-218ENST00000508503 OR10T2Q8NGX3 314 aa13.1□□□□□ -0.31
CLDND1-218ENST00000508503 TMEM174Q8WUU8 243 aa13.1□□□□□ -0.31
CLDND1-218ENST00000508503 SCFD1Q8WVM8 642 aa13.1□□□□□ -0.31
CLDND1-218ENST00000508503 TMEM209Q96SK2 561 aa13.1□□□□□ -0.31
CLDND1-218ENST00000508503 ZCWPW1Q9H0M4 648 aa13.1□□□□□ -0.31
CLDND1-218ENST00000508503 PCIF1Q9H4Z3 704 aa13.1□□□□□ -0.31
CLDND1-218ENST00000508503 PDE11AQ9HCR9 933 aa13.1□□□□□ -0.31
CLDND1-218ENST00000508503 INTS13Q9NVM9 706 aa13.1□□□□□ -0.31
CLDND1-218ENST00000508503 GDAP2Q9NXN4 497 aa13.1□□□□□ -0.31
CLDND1-218ENST00000508503 HPSEQ9Y251 543 aa13.1□□□□□ -0.31
CLDND1-218ENST00000508503 ASB3Q9Y575 518 aa13.1□□□□□ -0.31
CLDND1-218ENST00000508503 TCHHQ07283 1943 aa13.09□□□□□ -0.31
CLDND1-218ENST00000508503 MTMR11A4FU01 709 aa13.09□□□□□ -0.31
CLDND1-218ENST00000508503 GOLGA8IPA6NC78 632 aa13.09□□□□□ -0.31
CLDND1-218ENST00000508503 GOLGA8JA6NMD2 632 aa13.09□□□□□ -0.31
CLDND1-218ENST00000508503 NRG2O14511 850 aaPredicted RBP13.09□□□□□ -0.31
CLDND1-218ENST00000508503 GALR2O43603 387 aaPredicted RBP13.09□□□□□ -0.31
CLDND1-218ENST00000508503 PI15O43692 258 aa13.09□□□□□ -0.31
CLDND1-218ENST00000508503 KLRC4O43908 158 aa13.09□□□□□ -0.31
CLDND1-218ENST00000508503 ECI2O75521 394 aa13.09□□□□□ -0.31
CLDND1-218ENST00000508503 OR4Q2P0C623 313 aa13.09□□□□□ -0.31
CLDND1-218ENST00000508503 CASP1P29466 404 aa13.09□□□□□ -0.31
CLDND1-218ENST00000508503 GPC5P78333 572 aa13.09□□□□□ -0.31
CLDND1-218ENST00000508503 TFAMQ00059 246 aaKnown RBP13.09□□□□□ -0.31
CLDND1-218ENST00000508503 TWF1Q12792 350 aa13.09□□□□□ -0.31
CLDND1-218ENST00000508503 SMARCB1Q12824 385 aa13.09□□□□□ -0.31
CLDND1-218ENST00000508503 CUL4BQ13620 913 aa13.09□□□□□ -0.31
CLDND1-218ENST00000508503 SURF1Q15526 300 aa13.09□□□□□ -0.31
CLDND1-218ENST00000508503 SV2CQ496J9 727 aa13.09□□□□□ -0.31
CLDND1-218ENST00000508503 CYP4A22Q5TCH4 519 aa13.09□□□□□ -0.31
CLDND1-218ENST00000508503 WSCD1Q658N2 575 aa13.09□□□□□ -0.31
CLDND1-218ENST00000508503 LRRTM3Q86VH5 581 aa13.09□□□□□ -0.31
CLDND1-218ENST00000508503 C12orf56Q8IXR9 622 aa13.09□□□□□ -0.31
CLDND1-218ENST00000508503 HS6ST3Q8IZP7 471 aa13.09□□□□□ -0.31
CLDND1-218ENST00000508503 SIX5Q8N196 739 aa13.09□□□□□ -0.31
CLDND1-218ENST00000508503 ATAD1Q8NBU5 361 aa13.09□□□□□ -0.31
CLDND1-218ENST00000508503 GPR152Q8TDT2 470 aa13.09□□□□□ -0.31
CLDND1-218ENST00000508503 TCEAL4Q96EI5 215 aa13.09□□□□□ -0.31
CLDND1-218ENST00000508503 MCRS1Q96EZ8 462 aa13.09□□□□□ -0.31
CLDND1-218ENST00000508503 CORO1BQ9BR76 489 aa13.09□□□□□ -0.31
CLDND1-218ENST00000508503 DNAJC25Q9H1X3 360 aa13.09□□□□□ -0.31
CLDND1-218ENST00000508503 BLZF1Q9H2G9 400 aa13.09□□□□□ -0.31
CLDND1-218ENST00000508503 TRPV4Q9HBA0 871 aa13.09□□□□□ -0.31
CLDND1-218ENST00000508503 HSPBP1Q9NZL4 362 aa13.09□□□□□ -0.31
CLDND1-218ENST00000508503 CGNQ9P2M7 1197 aaKnown RBP13.09□□□□□ -0.31
CLDND1-218ENST00000508503 USP25Q9UHP3 1055 aa13.09□□□□□ -0.31
CLDND1-218ENST00000508503 SERTAD1Q9UHV2 236 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms