RNA–Protein interactions for RNA: ENST00000507689.1

COL1A1-211, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-211ENST00000507689 ADCY1Q08828 1119 aa16.85■□□□□ 0.29
COL1A1-211ENST00000507689 DPYDQ12882 1025 aa16.85■□□□□ 0.29
COL1A1-211ENST00000507689 TRPC3Q13507 836 aa16.85■□□□□ 0.29
COL1A1-211ENST00000507689 MYBPC2Q14324 1141 aa16.85■□□□□ 0.29
COL1A1-211ENST00000507689 KCNB1Q14721 858 aa16.85■□□□□ 0.29
COL1A1-211ENST00000507689 GET4Q7L5D6 327 aaPredicted RBP16.85■□□□□ 0.29
COL1A1-211ENST00000507689 C12orf56Q8IXR9 622 aa16.85■□□□□ 0.29
COL1A1-211ENST00000507689 MTMR12Q9C0I1 747 aa16.85■□□□□ 0.29
COL1A1-211ENST00000507689 INTS13Q9NVM9 706 aa16.85■□□□□ 0.29
COL1A1-211ENST00000507689 ZFP37Q9Y6Q3 630 aaPredicted RBP16.85■□□□□ 0.29
COL1A1-211ENST00000507689 TTC28Q96AY4 2481 aa16.84■□□□□ 0.29
COL1A1-211ENST00000507689 POU2F2P09086 479 aa16.84■□□□□ 0.29
COL1A1-211ENST00000507689 PRR29P0C7W0 189 aa16.84■□□□□ 0.29
COL1A1-211ENST00000507689 ALDH1A3P47895 512 aa16.84■□□□□ 0.29
COL1A1-211ENST00000507689 TSPY1Q01534 308 aa16.84■□□□□ 0.29
COL1A1-211ENST00000507689 CYP24A1Q07973 514 aa16.84■□□□□ 0.29
COL1A1-211ENST00000507689 MTMR3Q13615 1198 aa16.84■□□□□ 0.29
COL1A1-211ENST00000507689 PSMD6Q15008 389 aa16.84■□□□□ 0.29
COL1A1-211ENST00000507689 PTPN21Q16825 1174 aa16.84■□□□□ 0.29
COL1A1-211ENST00000507689 RSPO2Q6UXX9 243 aaPredicted RBP16.84■□□□□ 0.29
COL1A1-211ENST00000507689 GRASPQ7Z6J2 395 aaPredicted RBP16.84■□□□□ 0.29
COL1A1-211ENST00000507689 TCEAL8Q8IYN2 117 aa16.84■□□□□ 0.29
COL1A1-211ENST00000507689 DCP1BQ8IZD4 617 aaKnown RBP16.84■□□□□ 0.29
COL1A1-211ENST00000507689 KIAA0895Q8NCT3 520 aa16.84■□□□□ 0.29
COL1A1-211ENST00000507689 ZSWIM2Q8NEG5 633 aa16.84■□□□□ 0.29
COL1A1-211ENST00000507689 ZNF707Q96C28 371 aaPredicted RBP16.84■□□□□ 0.29
COL1A1-211ENST00000507689 ZNF512Q96ME7 567 aaPredicted RBP16.84■□□□□ 0.29
COL1A1-211ENST00000507689 LIMD1Q9UGP4 676 aa16.84■□□□□ 0.29
COL1A1-211ENST00000507689 PLXNA3P51805 1871 aa16.84■□□□□ 0.29
COL1A1-211ENST00000507689 TBC1D4O60343 1298 aa16.83■□□□□ 0.28
COL1A1-211ENST00000507689 CYP11A1P05108 521 aa16.83■□□□□ 0.28
COL1A1-211ENST00000507689 PTPN2P17706 415 aa16.83■□□□□ 0.28
COL1A1-211ENST00000507689 AP3M2P53677 418 aa16.83■□□□□ 0.28
COL1A1-211ENST00000507689 MYL7Q01449 175 aa16.83■□□□□ 0.28
COL1A1-211ENST00000507689 SMARCB1Q12824 385 aa16.83■□□□□ 0.28
COL1A1-211ENST00000507689 PABPC1LQ4VXU2 614 aaKnown RBP16.83■□□□□ 0.28
COL1A1-211ENST00000507689 CYP4A22Q5TCH4 519 aa16.83■□□□□ 0.28
COL1A1-211ENST00000507689 CEP135Q66GS9 1140 aa16.83■□□□□ 0.28
COL1A1-211ENST00000507689 UBALD2Q8IYN6 164 aa16.83■□□□□ 0.28
COL1A1-211ENST00000507689 FMR1NBQ8N0W7 255 aaPredicted RBP16.83■□□□□ 0.28
COL1A1-211ENST00000507689 TMEM86AQ8N2M4 240 aa16.83■□□□□ 0.28
COL1A1-211ENST00000507689 C1orf127Q8N9H9 656 aa16.83■□□□□ 0.28
COL1A1-211ENST00000507689 EDAQ92838 391 aa16.83■□□□□ 0.28
COL1A1-211ENST00000507689 SMARCE1Q969G3 411 aa16.83■□□□□ 0.28
COL1A1-211ENST00000507689 TIGD1Q96MW7 591 aa16.83■□□□□ 0.28
COL1A1-211ENST00000507689 CGRRF1Q99675 332 aa16.83■□□□□ 0.28
COL1A1-211ENST00000507689 SORCS3Q9UPU3 1222 aa16.83■□□□□ 0.28
COL1A1-211ENST00000507689 INSL5Q9Y5Q6 135 aa16.83■□□□□ 0.28
COL1A1-211ENST00000507689 SNX9Q9Y5X1 595 aa16.83■□□□□ 0.28
COL1A1-211ENST00000507689 TCHHQ07283 1943 aa16.82■□□□□ 0.28
COL1A1-211ENST00000507689 ZNF197O14709 1029 aa16.82■□□□□ 0.28
COL1A1-211ENST00000507689 SPTLC1O15269 473 aa16.82■□□□□ 0.28
COL1A1-211ENST00000507689 GPR37L1O60883 481 aa16.82■□□□□ 0.28
COL1A1-211ENST00000507689 NR3C1P04150 777 aa16.82■□□□□ 0.28
COL1A1-211ENST00000507689 EPHB3P54753 998 aa16.82■□□□□ 0.28
COL1A1-211ENST00000507689 GPR17Q13304 367 aa16.82■□□□□ 0.28
COL1A1-211ENST00000507689 BIRC3Q13489 604 aa16.82■□□□□ 0.28
COL1A1-211ENST00000507689 STIM1Q13586 685 aa16.82■□□□□ 0.28
COL1A1-211ENST00000507689 TAF12Q16514 161 aa16.82■□□□□ 0.28
COL1A1-211ENST00000507689 WSCD1Q658N2 575 aa16.82■□□□□ 0.28
COL1A1-211ENST00000507689 LMBRD2Q68DH5 695 aaPredicted RBP16.82■□□□□ 0.28
COL1A1-211ENST00000507689 TMEM130Q8N3G9 435 aa16.82■□□□□ 0.28
COL1A1-211ENST00000507689 GUF1Q8N442 669 aaKnown RBP16.82■□□□□ 0.28
COL1A1-211ENST00000507689 NXPE3Q969Y0 559 aa16.82■□□□□ 0.28
COL1A1-211ENST00000507689 HPDLQ96IR7 371 aa16.82■□□□□ 0.28
COL1A1-211ENST00000507689 PGLYRP2Q96PD5 576 aa16.82■□□□□ 0.28
COL1A1-211ENST00000507689 GSDMAQ96QA5 445 aa16.82■□□□□ 0.28
COL1A1-211ENST00000507689 TSG101Q99816 390 aa16.82■□□□□ 0.28
COL1A1-211ENST00000507689 IGSF9Q9P2J2 1179 aa16.82■□□□□ 0.28
COL1A1-211ENST00000507689 MRPS23Q9Y3D9 190 aaKnown RBP16.82■□□□□ 0.28
COL1A1-211ENST00000507689 VWA8A3KMH1 1905 aa16.82■□□□□ 0.28
COL1A1-211ENST00000507689 PAPLNO95428 1278 aa16.81■□□□□ 0.28
COL1A1-211ENST00000507689 KRT13P13646 458 aa16.81■□□□□ 0.28
COL1A1-211ENST00000507689 LHX1P48742 406 aa16.81■□□□□ 0.28
COL1A1-211ENST00000507689 TUFMP49411 452 aaKnown RBP16.81■□□□□ 0.28
COL1A1-211ENST00000507689 TNNC1P63316 161 aa16.81■□□□□ 0.28
COL1A1-211ENST00000507689 ZXDAP98168 799 aa16.81■□□□□ 0.28
COL1A1-211ENST00000507689 PNOCQ13519 176 aa16.81■□□□□ 0.28
COL1A1-211ENST00000507689 VEPH1Q14D04 833 aa16.81■□□□□ 0.28
COL1A1-211ENST00000507689 SLC39A12Q504Y0 691 aa16.81■□□□□ 0.28
COL1A1-211ENST00000507689 RNF19BQ6ZMZ0 732 aa16.81■□□□□ 0.28
COL1A1-211ENST00000507689 PDZD4Q76G19 769 aaPredicted RBP16.81■□□□□ 0.28
COL1A1-211ENST00000507689 TRAPPC11Q7Z392 1133 aa16.81■□□□□ 0.28
COL1A1-211ENST00000507689 SLC9A9Q8IVB4 645 aa16.81■□□□□ 0.28
COL1A1-211ENST00000507689 TOP6BLQ8N6T0 577 aa16.81■□□□□ 0.28
COL1A1-211ENST00000507689 LEMD2Q8NC56 503 aa16.81■□□□□ 0.28
COL1A1-211ENST00000507689 SPATA18Q8TC71 538 aa16.81■□□□□ 0.28
COL1A1-211ENST00000507689 FAM200AQ8TCP9 573 aa16.81■□□□□ 0.28
COL1A1-211ENST00000507689 C2orf15Q8WU43 125 aaKnown RBP16.81■□□□□ 0.28
COL1A1-211ENST00000507689 KHSRPQ92945 711 aaKnown RBP eCLIP16.81■□□□□ 0.28
COL1A1-211ENST00000507689 MMS19Q96T76 1030 aa16.81■□□□□ 0.28
COL1A1-211ENST00000507689 CORO1BQ9BR76 489 aa16.81■□□□□ 0.28
COL1A1-211ENST00000507689 MAPK8IP1Q9UQF2 711 aa16.81■□□□□ 0.28
COL1A1-211ENST00000507689 MTCL1Q9Y4B5 1905 aaKnown RBP16.8■□□□□ 0.28
COL1A1-211ENST00000507689 PRR33A8MZF0 331 aa16.8■□□□□ 0.28
COL1A1-211ENST00000507689 OR4Q2P0C623 313 aa16.8■□□□□ 0.28
COL1A1-211ENST00000507689 NR2F2P24468 414 aa16.8■□□□□ 0.28
COL1A1-211ENST00000507689 PCSK1P29120 753 aa16.8■□□□□ 0.28
COL1A1-211ENST00000507689 WNT7BP56706 349 aa16.8■□□□□ 0.28
COL1A1-211ENST00000507689 TWF1Q12792 350 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms