RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 TCF25Q9BQ70 676 aa21.53■■□□□ 1.04
USP53-203ENST00000507597 CYP3A43Q9HB55 503 aa21.53■■□□□ 1.04
USP53-203ENST00000507597 DAAM1Q9Y4D1 1078 aa21.53■■□□□ 1.04
USP53-203ENST00000507597 LGALS16A8MUM7 142 aa21.52■■□□□ 1.04
USP53-203ENST00000507597 TACC1O75410 805 aa21.52■■□□□ 1.04
USP53-203ENST00000507597 UBASH3AP57075 661 aa21.52■■□□□ 1.04
USP53-203ENST00000507597 MIIPQ5JXC2 388 aa21.52■■□□□ 1.04
USP53-203ENST00000507597 ZNF280DQ6N043 979 aa21.52■■□□□ 1.04
USP53-203ENST00000507597 CD300LGQ6UXG3 332 aa21.52■■□□□ 1.04
USP53-203ENST00000507597 ENOSF1Q7L5Y1 443 aa21.52■■□□□ 1.04
USP53-203ENST00000507597 BCL7CQ8WUZ0 217 aaPredicted RBP21.52■■□□□ 1.04
USP53-203ENST00000507597 RIN2Q8WYP3 895 aaPredicted RBP21.52■■□□□ 1.04
USP53-203ENST00000507597 PIK3R5Q8WYR1 880 aa21.52■■□□□ 1.04
USP53-203ENST00000507597 MRPL38Q96DV4 380 aaKnown RBP21.52■■□□□ 1.04
USP53-203ENST00000507597 LRCH3Q96II8 777 aa21.52■■□□□ 1.04
USP53-203ENST00000507597 NIF3L1Q9GZT8 377 aa21.52■■□□□ 1.04
USP53-203ENST00000507597 ZBP1Q9H171 429 aa21.52■■□□□ 1.04
USP53-203ENST00000507597 XYLT2Q9H1B5 865 aa21.52■■□□□ 1.04
USP53-203ENST00000507597 HSD3B7Q9H2F3 369 aa21.52■■□□□ 1.04
USP53-203ENST00000507597 SNX25Q9H3E2 840 aa21.52■■□□□ 1.04
USP53-203ENST00000507597 SOX1O00570 391 aaPredicted RBP21.51■■□□□ 1.03
USP53-203ENST00000507597 GRM6O15303 877 aa21.51■■□□□ 1.03
USP53-203ENST00000507597 EFEMP2O95967 443 aa21.51■■□□□ 1.03
USP53-203ENST00000507597 ATP1A3P13637 1013 aa21.51■■□□□ 1.03
USP53-203ENST00000507597 FANCCQ00597 558 aa21.51■■□□□ 1.03
USP53-203ENST00000507597 UVSSAQ2YD98 709 aa21.51■■□□□ 1.03
USP53-203ENST00000507597 OVOS1Q6IE37 1185 aa21.51■■□□□ 1.03
USP53-203ENST00000507597 PCMTD1Q96MG8 357 aaPredicted RBP21.51■■□□□ 1.03
USP53-203ENST00000507597 INTS2Q9H0H0 1204 aaKnown RBP21.51■■□□□ 1.03
USP53-203ENST00000507597 IRAK3Q9Y616 596 aa21.51■■□□□ 1.03
USP53-203ENST00000507597 NLRC5Q86WI3 1866 aa21.5■■□□□ 1.03
USP53-203ENST00000507597 F8W810 466 aa21.5■■□□□ 1.03
USP53-203ENST00000507597 SPTLC1O15269 473 aa21.5■■□□□ 1.03
USP53-203ENST00000507597 RFX1P22670 979 aa21.5■■□□□ 1.03
USP53-203ENST00000507597 PCSK1P29120 753 aa21.5■■□□□ 1.03
USP53-203ENST00000507597 TKTP29401 623 aaKnown RBP21.5■■□□□ 1.03
USP53-203ENST00000507597 VARS2Q5ST30 1063 aaKnown RBP21.5■■□□□ 1.03
USP53-203ENST00000507597 ELMSAN1Q6PJG2 1045 aa21.5■■□□□ 1.03
USP53-203ENST00000507597 ADGRF2Q8IZF7 708 aa21.5■■□□□ 1.03
USP53-203ENST00000507597 GDPD5Q8WTR4 605 aa21.5■■□□□ 1.03
USP53-203ENST00000507597 JAKMIP2Q96AA8 810 aa21.5■■□□□ 1.03
USP53-203ENST00000507597 FAM84AQ96KN4 292 aa21.5■■□□□ 1.03
USP53-203ENST00000507597 FNIP2Q9P278 1114 aa21.5■■□□□ 1.03
USP53-203ENST00000507597 BACE2Q9Y5Z0 518 aa21.5■■□□□ 1.03
USP53-203ENST00000507597 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.49■■□□□ 1.03
USP53-203ENST00000507597 OR6C75A6NL08 312 aa21.49■■□□□ 1.03
USP53-203ENST00000507597 I3L4J1 428 aa21.49■■□□□ 1.03
USP53-203ENST00000507597 OAZ2O95190 189 aa21.49■■□□□ 1.03
USP53-203ENST00000507597 MFAP3P55082 362 aa21.49■■□□□ 1.03
USP53-203ENST00000507597 PSMD5Q16401 504 aa21.49■■□□□ 1.03
USP53-203ENST00000507597 CTXN3Q4LDR2 81 aa21.49■■□□□ 1.03
USP53-203ENST00000507597 KIAA0319Q5VV43 1072 aa21.49■■□□□ 1.03
USP53-203ENST00000507597 PPFIBP1Q86W92 1011 aa21.49■■□□□ 1.03
USP53-203ENST00000507597 PPM1KQ8N3J5 372 aa21.49■■□□□ 1.03
USP53-203ENST00000507597 PDCL2Q8N4E4 241 aa21.49■■□□□ 1.03
USP53-203ENST00000507597 MRPL43Q8N983 215 aaKnown RBP21.49■■□□□ 1.03
USP53-203ENST00000507597 SEMA4DQ92854 862 aa21.49■■□□□ 1.03
USP53-203ENST00000507597 CDCA3Q99618 268 aaPredicted RBP21.49■■□□□ 1.03
USP53-203ENST00000507597 CRACR2AQ9BSW2 395 aa21.49■■□□□ 1.03
USP53-203ENST00000507597 PI4K2AQ9BTU6 479 aa21.49■■□□□ 1.03
USP53-203ENST00000507597 TTYH1Q9H313 450 aaPredicted RBP21.49■■□□□ 1.03
USP53-203ENST00000507597 PRDM12Q9H4Q4 367 aa21.49■■□□□ 1.03
USP53-203ENST00000507597 RTN4Q9NQC3 1192 aaKnown RBP21.49■■□□□ 1.03
USP53-203ENST00000507597 DPP7Q9UHL4 492 aa21.49■■□□□ 1.03
USP53-203ENST00000507597 A0A1B0GTH6 734 aa21.48■■□□□ 1.03
USP53-203ENST00000507597 C2CD2LO14523 706 aa21.48■■□□□ 1.03
USP53-203ENST00000507597 FSCN2O14926 492 aa21.48■■□□□ 1.03
USP53-203ENST00000507597 ADH1AP07327 375 aa21.48■■□□□ 1.03
USP53-203ENST00000507597 WARSP23381 471 aaKnown RBP21.48■■□□□ 1.03
USP53-203ENST00000507597 GNL1P36915 607 aaPredicted RBP21.48■■□□□ 1.03
USP53-203ENST00000507597 PLCB2Q00722 1185 aa21.48■■□□□ 1.03
USP53-203ENST00000507597 TSPY1Q01534 308 aa21.48■■□□□ 1.03
USP53-203ENST00000507597 GCNT1Q02742 428 aa21.48■■□□□ 1.03
USP53-203ENST00000507597 SMARCB1Q12824 385 aa21.48■■□□□ 1.03
USP53-203ENST00000507597 GRIN2CQ14957 1233 aa21.48■■□□□ 1.03
USP53-203ENST00000507597 SOWAHAQ2M3V2 549 aa21.48■■□□□ 1.03
USP53-203ENST00000507597 PLPP4Q5VZY2 271 aa21.48■■□□□ 1.03
USP53-203ENST00000507597 WSCD1Q658N2 575 aa21.48■■□□□ 1.03
USP53-203ENST00000507597 TRIM65Q6PJ69 517 aa21.48■■□□□ 1.03
USP53-203ENST00000507597 TAS1R1Q7RTX1 841 aa21.48■■□□□ 1.03
USP53-203ENST00000507597 SPRED2Q7Z698 418 aa21.48■■□□□ 1.03
USP53-203ENST00000507597 UNC93AQ86WB7 457 aa21.48■■□□□ 1.03
USP53-203ENST00000507597 DCP1BQ8IZD4 617 aaKnown RBP21.48■■□□□ 1.03
USP53-203ENST00000507597 OR6B3Q8NGW1 331 aa21.48■■□□□ 1.03
USP53-203ENST00000507597 TNIP3Q96KP6 325 aa21.48■■□□□ 1.03
USP53-203ENST00000507597 ERGIC2Q96RQ1 377 aa21.48■■□□□ 1.03
USP53-203ENST00000507597 MTRRQ9UBK8 725 aa21.48■■□□□ 1.03
USP53-203ENST00000507597 APEX2Q9UBZ4 518 aa21.48■■□□□ 1.03
USP53-203ENST00000507597 L1RE1Q9UN81 338 aa21.48■■□□□ 1.03
USP53-203ENST00000507597 KIAA1671Q9BY89 1806 aa21.48■■□□□ 1.03
USP53-203ENST00000507597 TRIOBPQ9H2D6 2365 aa21.47■■□□□ 1.03
USP53-203ENST00000507597 C1RP00736 705 aa21.47■■□□□ 1.03
USP53-203ENST00000507597 POU3F3P20264 500 aaPredicted RBP21.47■■□□□ 1.03
USP53-203ENST00000507597 PON1P27169 355 aa21.47■■□□□ 1.03
USP53-203ENST00000507597 NDUFV1P49821 464 aa21.47■■□□□ 1.03
USP53-203ENST00000507597 ERVFC1P60507 584 aa21.47■■□□□ 1.03
USP53-203ENST00000507597 LRMPQ12912 555 aa21.47■■□□□ 1.03
USP53-203ENST00000507597 CUL2Q13617 745 aa21.47■■□□□ 1.03
USP53-203ENST00000507597 MRPL58Q14197 206 aaKnown RBP21.47■■□□□ 1.03
USP53-203ENST00000507597 PTPN14Q15678 1187 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms