RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 PRR5LQ6MZQ0 368 aa18.75■□□□□ 0.59
NUP54-205ENST00000507257 APOBEC3HQ6NTF7 200 aaKnown RBP18.75■□□□□ 0.59
NUP54-205ENST00000507257 PPP1R2P3Q6NXS1 205 aa18.75■□□□□ 0.59
NUP54-205ENST00000507257 RFWD3Q6PCD5 774 aa18.75■□□□□ 0.59
NUP54-205ENST00000507257 DSTYKQ6XUX3 929 aa18.75■□□□□ 0.59
NUP54-205ENST00000507257 CENPUQ71F23 418 aa18.75■□□□□ 0.59
NUP54-205ENST00000507257 C4orf33Q8N1A6 199 aa18.75■□□□□ 0.59
NUP54-205ENST00000507257 PPFIBP2Q8ND30 876 aa18.75■□□□□ 0.59
NUP54-205ENST00000507257 NRG4Q8WWG1 115 aa18.75■□□□□ 0.59
NUP54-205ENST00000507257 SKA1Q96BD8 255 aa18.75■□□□□ 0.59
NUP54-205ENST00000507257 ZNF577Q9BSK1 485 aa18.75■□□□□ 0.59
NUP54-205ENST00000507257 DHRS4Q9BTZ2 278 aa18.75■□□□□ 0.59
NUP54-205ENST00000507257 TRIM55Q9BYV6 548 aa18.75■□□□□ 0.59
NUP54-205ENST00000507257 NPHS2Q9NP85 383 aa18.75■□□□□ 0.59
NUP54-205ENST00000507257 RAB20Q9NX57 234 aa18.75■□□□□ 0.59
NUP54-205ENST00000507257 BCS1LQ9Y276 419 aa18.75■□□□□ 0.59
NUP54-205ENST00000507257 MTO1Q9Y2Z2 717 aaKnown RBP18.75■□□□□ 0.59
NUP54-205ENST00000507257 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.75■□□□□ 0.59
NUP54-205ENST00000507257 SLX4Q8IY92 1834 aa18.75■□□□□ 0.59
NUP54-205ENST00000507257 MAP3K13O43283 966 aa18.74■□□□□ 0.59
NUP54-205ENST00000507257 RAD21O60216 631 aa18.74■□□□□ 0.59
NUP54-205ENST00000507257 NCKAP1LP55160 1127 aa18.74■□□□□ 0.59
NUP54-205ENST00000507257 GEMIN4P57678 1058 aaKnown RBP18.74■□□□□ 0.59
NUP54-205ENST00000507257 BPIFB4P59827 614 aa18.74■□□□□ 0.59
NUP54-205ENST00000507257 DYNC1I2Q13409 638 aaKnown RBP18.74■□□□□ 0.59
NUP54-205ENST00000507257 PPP1R15BQ5SWA1 713 aa18.74■□□□□ 0.59
NUP54-205ENST00000507257 MON1BQ7L1V2 547 aa18.74■□□□□ 0.59
NUP54-205ENST00000507257 GSTA5Q7RTV2 222 aa18.74■□□□□ 0.59
NUP54-205ENST00000507257 USP37Q86T82 979 aa18.74■□□□□ 0.59
NUP54-205ENST00000507257 ARHGAP24Q8N264 748 aa18.74■□□□□ 0.59
NUP54-205ENST00000507257 ARHGAP18Q8N392 663 aa18.74■□□□□ 0.59
NUP54-205ENST00000507257 ALLCQ8N6M5 410 aa18.74■□□□□ 0.59
NUP54-205ENST00000507257 MAK16Q9BXY0 300 aaKnown RBP18.74■□□□□ 0.59
NUP54-205ENST00000507257 PI4KBQ9UBF8 816 aa18.74■□□□□ 0.59
NUP54-205ENST00000507257 F8W8V4 182 aa18.74■□□□□ 0.59
NUP54-205ENST00000507257 PLSCR1O15162 318 aa18.74■□□□□ 0.59
NUP54-205ENST00000507257 ATP9AO75110 1047 aa18.74■□□□□ 0.59
NUP54-205ENST00000507257 LYPLA2O95372 231 aa18.74■□□□□ 0.59
NUP54-205ENST00000507257 VIL1P09327 827 aaKnown RBP18.74■□□□□ 0.59
NUP54-205ENST00000507257 PTPN7P35236 360 aa18.74■□□□□ 0.59
NUP54-205ENST00000507257 RAP1GDS1P52306 607 aa18.74■□□□□ 0.59
NUP54-205ENST00000507257 SNAP25P60880 206 aa18.74■□□□□ 0.59
NUP54-205ENST00000507257 SNRNP35Q16560 246 aaKnown RBP18.74■□□□□ 0.59
NUP54-205ENST00000507257 MAPK6Q16659 721 aa18.74■□□□□ 0.59
NUP54-205ENST00000507257 DAB2IPQ5VWQ8 1189 aa18.74■□□□□ 0.59
NUP54-205ENST00000507257 TRIM72Q6ZMU5 477 aa18.74■□□□□ 0.59
NUP54-205ENST00000507257 HAUS6Q7Z4H7 955 aa18.74■□□□□ 0.59
NUP54-205ENST00000507257 CHSY1Q86X52 802 aa18.74■□□□□ 0.59
NUP54-205ENST00000507257 TEKT1Q969V4 418 aa18.74■□□□□ 0.59
NUP54-205ENST00000507257 HEMGNQ9BXL5 484 aa18.74■□□□□ 0.59
NUP54-205ENST00000507257 TRIM4Q9C037 500 aa18.74■□□□□ 0.59
NUP54-205ENST00000507257 MRPL47Q9HD33 250 aaKnown RBP18.74■□□□□ 0.59
NUP54-205ENST00000507257 POLIQ9UNA4 740 aa18.74■□□□□ 0.59
NUP54-205ENST00000507257 EXOC7Q9UPT5 735 aa18.74■□□□□ 0.59
NUP54-205ENST00000507257 PCDHB2Q9Y5E7 798 aa18.74■□□□□ 0.59
NUP54-205ENST00000507257 ADAMTSL1Q8N6G6 1762 aa18.74■□□□□ 0.59
NUP54-205ENST00000507257 BTAF1O14981 1849 aa18.73■□□□□ 0.59
NUP54-205ENST00000507257 FAM196BA6NMK8 535 aa18.73■□□□□ 0.59
NUP54-205ENST00000507257 EIF4E1BA6NMX2 242 aaKnown RBP18.73■□□□□ 0.59
NUP54-205ENST00000507257 CAPN9O14815 690 aa18.73■□□□□ 0.59
NUP54-205ENST00000507257 GYG2O15488 501 aa18.73■□□□□ 0.59
NUP54-205ENST00000507257 POLR2MP0CAP2 368 aa18.73■□□□□ 0.59
NUP54-205ENST00000507257 CDK16Q00536 496 aa18.73■□□□□ 0.59
NUP54-205ENST00000507257 MCL1Q07820 350 aa18.73■□□□□ 0.59
NUP54-205ENST00000507257 AOC3Q16853 763 aa18.73■□□□□ 0.59
NUP54-205ENST00000507257 RNASEH2BQ5TBB1 312 aaKnown RBP18.73■□□□□ 0.59
NUP54-205ENST00000507257 LIN9Q5TKA1 542 aa18.73■□□□□ 0.59
NUP54-205ENST00000507257 ADGRD1Q6QNK2 874 aa18.73■□□□□ 0.59
NUP54-205ENST00000507257 UCMAQ8WVF2 138 aa18.73■□□□□ 0.59
NUP54-205ENST00000507257 RBM41Q96IZ5 413 aaKnown RBP18.73■□□□□ 0.59
NUP54-205ENST00000507257 MFSD14AQ96MC6 490 aa18.73■□□□□ 0.59
NUP54-205ENST00000507257 FBXL18Q96ME1 805 aa18.73■□□□□ 0.59
NUP54-205ENST00000507257 PIDD1Q9HB75 910 aa18.73■□□□□ 0.59
NUP54-205ENST00000507257 DNAJB4Q9UDY4 337 aa18.73■□□□□ 0.59
NUP54-205ENST00000507257 PRR12Q9ULL5 1215 aa18.73■□□□□ 0.59
NUP54-205ENST00000507257 NUMBLQ9Y6R0 609 aa18.73■□□□□ 0.59
NUP54-205ENST00000507257 TBX10O75333 385 aa18.72■□□□□ 0.59
NUP54-205ENST00000507257 UPP2O95045 317 aa18.72■□□□□ 0.59
NUP54-205ENST00000507257 P4HBP07237 508 aaKnown RBP18.72■□□□□ 0.59
NUP54-205ENST00000507257 TSHRP16473 764 aa18.72■□□□□ 0.59
NUP54-205ENST00000507257 PHBP35232 272 aa18.72■□□□□ 0.59
NUP54-205ENST00000507257 NFIAQ12857 509 aa18.72■□□□□ 0.59
NUP54-205ENST00000507257 IKQ13123 557 aaPredicted RBP18.72■□□□□ 0.59
NUP54-205ENST00000507257 RCOR2Q8IZ40 523 aa18.72■□□□□ 0.59
NUP54-205ENST00000507257 MZB1Q8WU39 189 aa18.72■□□□□ 0.59
NUP54-205ENST00000507257 ZNF184Q99676 751 aaPredicted RBP18.72■□□□□ 0.59
NUP54-205ENST00000507257 VPS37BQ9H9H4 285 aa18.72■□□□□ 0.59
NUP54-205ENST00000507257 ARL8BQ9NVJ2 186 aa18.72■□□□□ 0.59
NUP54-205ENST00000507257 A0A1W2PPM1 405 aa18.72■□□□□ 0.59
NUP54-205ENST00000507257 MAP3K7O43318 606 aa18.72■□□□□ 0.59
NUP54-205ENST00000507257 MAGEC1O60732 1142 aa18.72■□□□□ 0.59
NUP54-205ENST00000507257 KRT36O76013 467 aa18.72■□□□□ 0.59
NUP54-205ENST00000507257 KRT4P19013 534 aa18.72■□□□□ 0.59
NUP54-205ENST00000507257 KCNA3P22001 575 aa18.72■□□□□ 0.59
NUP54-205ENST00000507257 NSFP46459 744 aaKnown RBP18.72■□□□□ 0.59
NUP54-205ENST00000507257 CACNA2D1P54289 1103 aa18.72■□□□□ 0.59
NUP54-205ENST00000507257 TAS2R40P59535 323 aa18.72■□□□□ 0.59
NUP54-205ENST00000507257 NFX1Q12986 1120 aaKnown RBP18.72■□□□□ 0.59
NUP54-205ENST00000507257 KLHL38Q2WGJ6 581 aa18.72■□□□□ 0.59
NUP54-205ENST00000507257 RNF220Q5VTB9 566 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms