RNA–Protein interactions for RNA: ENST00000505392.5

CCHCR1-219, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 547 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-219ENST00000505392 TIMM13Q9Y5L4 95 aaPredicted RBP12.65□□□□□ -0.38
CCHCR1-219ENST00000505392 CYP46A1Q9Y6A2 500 aa12.65□□□□□ -0.38
CCHCR1-219ENST00000505392 TMEM8BA6NDV4 472 aa12.64□□□□□ -0.39
CCHCR1-219ENST00000505392 WNT7AO00755 349 aa12.64□□□□□ -0.39
CCHCR1-219ENST00000505392 DCLK1O15075 740 aa12.64□□□□□ -0.39
CCHCR1-219ENST00000505392 NEMFO60524 1076 aa12.64□□□□□ -0.39
CCHCR1-219ENST00000505392 RHOBTB1O94844 696 aa12.64□□□□□ -0.39
CCHCR1-219ENST00000505392 VNN2O95498 520 aa12.64□□□□□ -0.39
CCHCR1-219ENST00000505392 GABRR2P28476 465 aa12.64□□□□□ -0.39
CCHCR1-219ENST00000505392 PLCB2Q00722 1185 aa12.64□□□□□ -0.39
CCHCR1-219ENST00000505392 YWHAHQ04917 246 aaPredicted RBP12.64□□□□□ -0.39
CCHCR1-219ENST00000505392 TMEM196Q5HYL7 178 aa12.64□□□□□ -0.39
CCHCR1-219ENST00000505392 FSTL4Q6MZW2 842 aa12.64□□□□□ -0.39
CCHCR1-219ENST00000505392 TNFRSF25Q93038 417 aa12.64□□□□□ -0.39
CCHCR1-219ENST00000505392 ACO2Q99798 780 aaKnown RBP12.64□□□□□ -0.39
CCHCR1-219ENST00000505392 TCHPQ9BT92 498 aa12.64□□□□□ -0.39
CCHCR1-219ENST00000505392 CDT1Q9H211 546 aa12.64□□□□□ -0.39
CCHCR1-219ENST00000505392 PTPRHQ9HD43 1115 aa12.64□□□□□ -0.39
CCHCR1-219ENST00000505392 GKN1Q9NS71 199 aa12.64□□□□□ -0.39
CCHCR1-219ENST00000505392 THG1LQ9NWX6 298 aaKnown RBP12.64□□□□□ -0.39
CCHCR1-219ENST00000505392 PCDHB8Q9UN66 801 aa12.64□□□□□ -0.39
CCHCR1-219ENST00000505392 CEP295Q9C0D2 2601 aa12.64□□□□□ -0.39
CCHCR1-219ENST00000505392 ARID2Q68CP9 1835 aa12.64□□□□□ -0.39
CCHCR1-219ENST00000505392 LAMA1P25391 3075 aa12.64□□□□□ -0.39
CCHCR1-219ENST00000505392 GREB1Q4ZG55 1949 aa12.63□□□□□ -0.39
CCHCR1-219ENST00000505392 BCLAF3A2AJT9 711 aaKnown RBP12.63□□□□□ -0.39
CCHCR1-219ENST00000505392 SOBPA7XYQ1 873 aa12.63□□□□□ -0.39
CCHCR1-219ENST00000505392 OAZ2O95190 189 aa12.63□□□□□ -0.39
CCHCR1-219ENST00000505392 CEACAM1P13688 526 aa12.63□□□□□ -0.39
CCHCR1-219ENST00000505392 ELF2Q15723 593 aa12.63□□□□□ -0.39
CCHCR1-219ENST00000505392 ZNF568Q3ZCX4 644 aa12.63□□□□□ -0.39
CCHCR1-219ENST00000505392 ARHGAP15Q53QZ3 475 aa12.63□□□□□ -0.39
CCHCR1-219ENST00000505392 GATA6Q92908 595 aa12.63□□□□□ -0.39
CCHCR1-219ENST00000505392 HHIPQ96QV1 700 aa12.63□□□□□ -0.39
CCHCR1-219ENST00000505392 POLR3CQ9BUI4 534 aaPredicted RBP12.63□□□□□ -0.39
CCHCR1-219ENST00000505392 TARS2Q9BW92 718 aaKnown RBP12.63□□□□□ -0.39
CCHCR1-219ENST00000505392 TMEM60Q9H2L4 133 aa12.63□□□□□ -0.39
CCHCR1-219ENST00000505392 BRMS1Q9HCU9 246 aa12.63□□□□□ -0.39
CCHCR1-219ENST00000505392 CNTN3Q9P232 1028 aa12.63□□□□□ -0.39
CCHCR1-219ENST00000505392 LHX6Q9UPM6 363 aa12.63□□□□□ -0.39
CCHCR1-219ENST00000505392 ASB3Q9Y575 518 aa12.63□□□□□ -0.39
CCHCR1-219ENST00000505392 LNP1A1A4G5 178 aa12.62□□□□□ -0.39
CCHCR1-219ENST00000505392 CCDC169A6NNP5 214 aa12.62□□□□□ -0.39
CCHCR1-219ENST00000505392 BTBD18B2RXH4 712 aa12.62□□□□□ -0.39
CCHCR1-219ENST00000505392 TRDMT1O14717 391 aaKnown RBP12.62□□□□□ -0.39
CCHCR1-219ENST00000505392 KHNYNO15037 678 aaKnown RBP12.62□□□□□ -0.39
CCHCR1-219ENST00000505392 RNF40O75150 1001 aa12.62□□□□□ -0.39
CCHCR1-219ENST00000505392 PRAMEF12O95522 483 aa12.62□□□□□ -0.39
CCHCR1-219ENST00000505392 FGF19O95750 216 aa12.62□□□□□ -0.39
CCHCR1-219ENST00000505392 EGFP01133 1207 aa12.62□□□□□ -0.39
CCHCR1-219ENST00000505392 RPA1P27694 616 aa12.62□□□□□ -0.39
CCHCR1-219ENST00000505392 GALK1P51570 392 aa12.62□□□□□ -0.39
CCHCR1-219ENST00000505392 GPR17Q13304 367 aa12.62□□□□□ -0.39
CCHCR1-219ENST00000505392 RUNX3Q13761 415 aa12.62□□□□□ -0.39
CCHCR1-219ENST00000505392 CENPPQ6IPU0 288 aa12.62□□□□□ -0.39
CCHCR1-219ENST00000505392 USP37Q86T82 979 aa12.62□□□□□ -0.39
CCHCR1-219ENST00000505392 ATAD1Q8NBU5 361 aa12.62□□□□□ -0.39
CCHCR1-219ENST00000505392 KIFAP3Q92845 792 aa12.62□□□□□ -0.39
CCHCR1-219ENST00000505392 PSMG2Q969U7 264 aa12.62□□□□□ -0.39
CCHCR1-219ENST00000505392 OXCT2Q9BYC2 517 aaPredicted RBP12.62□□□□□ -0.39
CCHCR1-219ENST00000505392 SMG9Q9H0W8 520 aaKnown RBP12.62□□□□□ -0.39
CCHCR1-219ENST00000505392 TASP1Q9H6P5 420 aa12.62□□□□□ -0.39
CCHCR1-219ENST00000505392 FBRSL1Q9HCM7 1045 aaKnown RBP12.62□□□□□ -0.39
CCHCR1-219ENST00000505392 PDRG1Q9NUG6 133 aa12.62□□□□□ -0.39
CCHCR1-219ENST00000505392 ORC3Q9UBD5 711 aaPredicted RBP12.62□□□□□ -0.39
CCHCR1-219ENST00000505392 INVSQ9Y283 1065 aa12.62□□□□□ -0.39
CCHCR1-219ENST00000505392 STK36Q9NRP7 1315 aa12.62□□□□□ -0.39
CCHCR1-219ENST00000505392 FASNP49327 2511 aaKnown RBP12.61□□□□□ -0.39
CCHCR1-219ENST00000505392 OTOL1A6NHN0 477 aaPredicted RBP12.61□□□□□ -0.39
CCHCR1-219ENST00000505392 M0QZQ0 153 aa12.61□□□□□ -0.39
CCHCR1-219ENST00000505392 CDX4O14627 284 aaPredicted RBP12.61□□□□□ -0.39
CCHCR1-219ENST00000505392 MEFVO15553 781 aaPredicted RBP12.61□□□□□ -0.39
CCHCR1-219ENST00000505392 SOAT2O75908 522 aa12.61□□□□□ -0.39
CCHCR1-219ENST00000505392 MCF2P10911 925 aa12.61□□□□□ -0.39
CCHCR1-219ENST00000505392 HARSP12081 509 aaKnown RBP12.61□□□□□ -0.39
CCHCR1-219ENST00000505392 CSRP1P21291 193 aaKnown RBP12.61□□□□□ -0.39
CCHCR1-219ENST00000505392 WEE1P30291 646 aa12.61□□□□□ -0.39
CCHCR1-219ENST00000505392 GBP1P32455 592 aa12.61□□□□□ -0.39
CCHCR1-219ENST00000505392 MCM2P49736 904 aa12.61□□□□□ -0.39
CCHCR1-219ENST00000505392 PEX3P56589 373 aa12.61□□□□□ -0.39
CCHCR1-219ENST00000505392 CYP4F8P98187 520 aa12.61□□□□□ -0.39
CCHCR1-219ENST00000505392 SLC10A6Q3KNW5 377 aa12.61□□□□□ -0.39
CCHCR1-219ENST00000505392 TRIM68Q6AZZ1 485 aa12.61□□□□□ -0.39
CCHCR1-219ENST00000505392 ITIH5Q86UX2 942 aa12.61□□□□□ -0.39
CCHCR1-219ENST00000505392 TMEM130Q8N3G9 435 aa12.61□□□□□ -0.39
CCHCR1-219ENST00000505392 ZCCHC14Q8WYQ9 949 aaKnown RBP12.61□□□□□ -0.39
CCHCR1-219ENST00000505392 WASF1Q92558 559 aa12.61□□□□□ -0.39
CCHCR1-219ENST00000505392 ZBTB45Q96K62 511 aaPredicted RBP12.61□□□□□ -0.39
CCHCR1-219ENST00000505392 FAM83CQ9BQN1 747 aa12.61□□□□□ -0.39
CCHCR1-219ENST00000505392 SLC46A2Q9BY10 475 aa12.61□□□□□ -0.39
CCHCR1-219ENST00000505392 MRPL4Q9BYD3 311 aaKnown RBP12.61□□□□□ -0.39
CCHCR1-219ENST00000505392 EBF3Q9H4W6 596 aa12.61□□□□□ -0.39
CCHCR1-219ENST00000505392 TMEM134Q9H6X4 195 aa12.61□□□□□ -0.39
CCHCR1-219ENST00000505392 TMEM9BQ9NQ34 198 aa12.61□□□□□ -0.39
CCHCR1-219ENST00000505392 TUBGCP4Q9UGJ1 667 aa12.61□□□□□ -0.39
CCHCR1-219ENST00000505392 MTMR11A4FU01 709 aa12.6□□□□□ -0.39
CCHCR1-219ENST00000505392 OR6C75A6NL08 312 aa12.6□□□□□ -0.39
CCHCR1-219ENST00000505392 REC8O95072 547 aa12.6□□□□□ -0.39
CCHCR1-219ENST00000505392 CTDNEP1O95476 244 aa12.6□□□□□ -0.39
CCHCR1-219ENST00000505392 FDPSP14324 419 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms