RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 TNNC1P63316 161 aa10.6□□□□□ -0.71
NR1I3-220ENST00000505005 GPR17Q13304 367 aa10.6□□□□□ -0.71
NR1I3-220ENST00000505005 CBX2Q14781 532 aaPredicted RBP10.6□□□□□ -0.71
NR1I3-220ENST00000505005 RTP2Q5QGT7 225 aa10.6□□□□□ -0.71
NR1I3-220ENST00000505005 TRAPPC11Q7Z392 1133 aa10.6□□□□□ -0.71
NR1I3-220ENST00000505005 FILIP1Q7Z7B0 1213 aa10.6□□□□□ -0.71
NR1I3-220ENST00000505005 GPR149Q86SP6 731 aa10.6□□□□□ -0.71
NR1I3-220ENST00000505005 ITIH5Q86UX2 942 aa10.6□□□□□ -0.71
NR1I3-220ENST00000505005 TCEAL8Q8IYN2 117 aa10.6□□□□□ -0.71
NR1I3-220ENST00000505005 RDH13Q8NBN7 331 aa10.6□□□□□ -0.71
NR1I3-220ENST00000505005 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.6□□□□□ -0.71
NR1I3-220ENST00000505005 SPPL2BQ8TCT7 592 aa10.6□□□□□ -0.71
NR1I3-220ENST00000505005 PARD3BQ8TEW8 1205 aa10.6□□□□□ -0.71
NR1I3-220ENST00000505005 HASPINQ8TF76 798 aa10.6□□□□□ -0.71
NR1I3-220ENST00000505005 BCL7CQ8WUZ0 217 aaPredicted RBP10.6□□□□□ -0.71
NR1I3-220ENST00000505005 HPDLQ96IR7 371 aa10.6□□□□□ -0.71
NR1I3-220ENST00000505005 FAM81BQ96LP2 452 aa10.6□□□□□ -0.71
NR1I3-220ENST00000505005 CLSTN3Q9BQT9 956 aa10.6□□□□□ -0.71
NR1I3-220ENST00000505005 ACBD6Q9BR61 282 aa10.6□□□□□ -0.71
NR1I3-220ENST00000505005 PAAF1Q9BRP4 392 aa10.6□□□□□ -0.71
NR1I3-220ENST00000505005 PRKD2Q9BZL6 878 aa10.6□□□□□ -0.71
NR1I3-220ENST00000505005 GPR88Q9GZN0 384 aa10.6□□□□□ -0.71
NR1I3-220ENST00000505005 VRTNQ9H8Y1 702 aa10.6□□□□□ -0.71
NR1I3-220ENST00000505005 GOLGA2P5Q9HBQ8 144 aa10.6□□□□□ -0.71
NR1I3-220ENST00000505005 PDE11AQ9HCR9 933 aa10.6□□□□□ -0.71
NR1I3-220ENST00000505005 MAN1C1Q9NR34 630 aa10.6□□□□□ -0.71
NR1I3-220ENST00000505005 CLEC1BQ9P126 229 aa10.6□□□□□ -0.71
NR1I3-220ENST00000505005 TUBGCP4Q9UGJ1 667 aa10.6□□□□□ -0.71
NR1I3-220ENST00000505005 CDY1Q9Y6F8 540 aa10.6□□□□□ -0.71
NR1I3-220ENST00000505005 CCDC195A0A1B0GUA6 201 aa10.59□□□□□ -0.71
NR1I3-220ENST00000505005 H3BQ06 376 aaPredicted RBP10.59□□□□□ -0.71
NR1I3-220ENST00000505005 PRRG1O14668 218 aa10.59□□□□□ -0.71
NR1I3-220ENST00000505005 B4GALT3O60512 393 aa10.59□□□□□ -0.71
NR1I3-220ENST00000505005 TACC1O75410 805 aa10.59□□□□□ -0.71
NR1I3-220ENST00000505005 MICAL2O94851 1124 aa10.59□□□□□ -0.71
NR1I3-220ENST00000505005 LETM1O95202 739 aaPredicted RBP10.59□□□□□ -0.71
NR1I3-220ENST00000505005 CCDC192P0DO97 292 aa10.59□□□□□ -0.71
NR1I3-220ENST00000505005 TKTP29401 623 aaKnown RBP10.59□□□□□ -0.71
NR1I3-220ENST00000505005 CASP1P29466 404 aa10.59□□□□□ -0.71
NR1I3-220ENST00000505005 HOXD13P35453 343 aa10.59□□□□□ -0.71
NR1I3-220ENST00000505005 PRCPP42785 496 aa10.59□□□□□ -0.71
NR1I3-220ENST00000505005 BRCC3P46736 316 aa10.59□□□□□ -0.71
NR1I3-220ENST00000505005 ALDH1A3P47895 512 aa10.59□□□□□ -0.71
NR1I3-220ENST00000505005 MCCD1P59942 119 aaPredicted RBP10.59□□□□□ -0.71
NR1I3-220ENST00000505005 BIRC3Q13489 604 aa10.59□□□□□ -0.71
NR1I3-220ENST00000505005 ZBTB41Q5SVQ8 909 aa10.59□□□□□ -0.71
NR1I3-220ENST00000505005 LLGL2Q6P1M3 1020 aa10.59□□□□□ -0.71
NR1I3-220ENST00000505005 C4orf50Q6ZRC1 276 aa10.59□□□□□ -0.71
NR1I3-220ENST00000505005 TAS1R1Q7RTX1 841 aa10.59□□□□□ -0.71
NR1I3-220ENST00000505005 FRMD5Q7Z6J6 570 aa10.59□□□□□ -0.71
NR1I3-220ENST00000505005 PALB2Q86YC2 1186 aa10.59□□□□□ -0.71
NR1I3-220ENST00000505005 CBWD2Q8IUF1 395 aa10.59□□□□□ -0.71
NR1I3-220ENST00000505005 FAM114A1Q8IWE2 563 aa10.59□□□□□ -0.71
NR1I3-220ENST00000505005 FAM186BQ8IYM0 893 aa10.59□□□□□ -0.71
NR1I3-220ENST00000505005 ADSSL1Q8N142 457 aa10.59□□□□□ -0.71
NR1I3-220ENST00000505005 SUSD6Q92537 303 aa10.59□□□□□ -0.71
NR1I3-220ENST00000505005 HPS3Q969F9 1004 aa10.59□□□□□ -0.71
NR1I3-220ENST00000505005 CCDC127Q96BQ5 260 aa10.59□□□□□ -0.71
NR1I3-220ENST00000505005 ZNF512Q96ME7 567 aaPredicted RBP10.59□□□□□ -0.71
NR1I3-220ENST00000505005 UHRF1Q96T88 793 aaPredicted RBP10.59□□□□□ -0.71
NR1I3-220ENST00000505005 VN1R3Q9BXE9 311 aa10.59□□□□□ -0.71
NR1I3-220ENST00000505005 NUP62CLQ9H1M0 184 aa10.59□□□□□ -0.71
NR1I3-220ENST00000505005 FBXL5Q9UKA1 691 aa10.59□□□□□ -0.71
NR1I3-220ENST00000505005 FBXW11Q9UKB1 542 aa10.59□□□□□ -0.71
NR1I3-220ENST00000505005 ANK1P16157 1881 aa10.58□□□□□ -0.72
NR1I3-220ENST00000505005 SOBPA7XYQ1 873 aa10.58□□□□□ -0.72
NR1I3-220ENST00000505005 TISP43B9A030 160 aa10.58□□□□□ -0.72
NR1I3-220ENST00000505005 P4HA2O15460 535 aa10.58□□□□□ -0.72
NR1I3-220ENST00000505005 TBC1D4O60343 1298 aa10.58□□□□□ -0.72
NR1I3-220ENST00000505005 TBX10O75333 385 aa10.58□□□□□ -0.72
NR1I3-220ENST00000505005 CSPG5O95196 566 aa10.58□□□□□ -0.72
NR1I3-220ENST00000505005 GLP2RO95838 553 aa10.58□□□□□ -0.72
NR1I3-220ENST00000505005 PTPN2P17706 415 aa10.58□□□□□ -0.72
NR1I3-220ENST00000505005 POLR2BP30876 1174 aaKnown RBP10.58□□□□□ -0.72
NR1I3-220ENST00000505005 EPHB3P54753 998 aa10.58□□□□□ -0.72
NR1I3-220ENST00000505005 YWHAEP62258 255 aaKnown RBP10.58□□□□□ -0.72
NR1I3-220ENST00000505005 SPAG1Q07617 926 aa10.58□□□□□ -0.72
NR1I3-220ENST00000505005 BFSP1Q12934 665 aa10.58□□□□□ -0.72
NR1I3-220ENST00000505005 PAK1Q13153 545 aa10.58□□□□□ -0.72
NR1I3-220ENST00000505005 MORC3Q14149 939 aa10.58□□□□□ -0.72
NR1I3-220ENST00000505005 VEPH1Q14D04 833 aa10.58□□□□□ -0.72
NR1I3-220ENST00000505005 TPD52L1Q16890 204 aaPredicted RBP10.58□□□□□ -0.72
NR1I3-220ENST00000505005 ZNF667Q5HYK9 610 aa10.58□□□□□ -0.72
NR1I3-220ENST00000505005 WDR44Q5JSH3 913 aa10.58□□□□□ -0.72
NR1I3-220ENST00000505005 CYP4A22Q5TCH4 519 aa10.58□□□□□ -0.72
NR1I3-220ENST00000505005 KRT39Q6A163 491 aa10.58□□□□□ -0.72
NR1I3-220ENST00000505005 EFCAB13Q8IY85 973 aa10.58□□□□□ -0.72
NR1I3-220ENST00000505005 GJD3Q8N144 294 aa10.58□□□□□ -0.72
NR1I3-220ENST00000505005 C1orf127Q8N9H9 656 aa10.58□□□□□ -0.72
NR1I3-220ENST00000505005 ADAMTS19Q8TE59 1207 aa10.58□□□□□ -0.72
NR1I3-220ENST00000505005 AUTS2Q8WXX7 1259 aa10.58□□□□□ -0.72
NR1I3-220ENST00000505005 FUBP3Q96I24 572 aaKnown RBP eCLIP10.58□□□□□ -0.72
NR1I3-220ENST00000505005 TNIP3Q96KP6 325 aa10.58□□□□□ -0.72
NR1I3-220ENST00000505005 FGFBP2Q9BYJ0 223 aa10.58□□□□□ -0.72
NR1I3-220ENST00000505005 MTMR12Q9C0I1 747 aa10.58□□□□□ -0.72
NR1I3-220ENST00000505005 S1PR5Q9H228 398 aa10.58□□□□□ -0.72
NR1I3-220ENST00000505005 ABCB6Q9NP58 842 aa10.58□□□□□ -0.72
NR1I3-220ENST00000505005 AVENQ9NQS1 362 aaPredicted RBP10.58□□□□□ -0.72
NR1I3-220ENST00000505005 ARMCX3Q9UH62 379 aaPredicted RBP10.58□□□□□ -0.72
NR1I3-220ENST00000505005 BARX2Q9UMQ3 279 aaPredicted RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms