RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 ECE2O60344 883 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 FARP2O94887 1054 aaPredicted RBP6.36□□□□□ -1.39
LINC02397-201ENST00000504409 SRGNP10124 158 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 CCNA2P20248 432 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 CCT8P50990 548 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 DNA2P51530 1060 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 HDLBPQ00341 1268 aaKnown RBP6.36□□□□□ -1.39
LINC02397-201ENST00000504409 FAM45BPQ6NSW5 357 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 NSUN7Q8NE18 718 aaKnown RBP6.36□□□□□ -1.39
LINC02397-201ENST00000504409 MEIS3Q99687 375 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 USE1Q9NZ43 259 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 SPATA7Q9P0W8 599 aa6.36□□□□□ -1.39
LINC02397-201ENST00000504409 PIGBOS1A0A0B4J2F0 54 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 NUP62P37198 522 aaPredicted RBP6.35□□□□□ -1.39
LINC02397-201ENST00000504409 GPC5P78333 572 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 RASA3Q14644 834 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 ITPRIPL1Q6GPH6 555 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 IQCF2Q8IXL9 164 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 RHBDF1Q96CC6 855 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 FAM124BQ9H5Z6 455 aaPredicted RBP6.35□□□□□ -1.39
LINC02397-201ENST00000504409 CLK4Q9HAZ1 481 aaKnown RBP6.35□□□□□ -1.39
LINC02397-201ENST00000504409 MLXIPLQ9NP71 852 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 LNPEPQ9UIQ6 1025 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 N4BP2Q86UW6 1770 aaPredicted RBP6.35□□□□□ -1.39
LINC02397-201ENST00000504409 NR4A1P22736 598 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 QARSP47897 775 aaKnown RBP6.35□□□□□ -1.39
LINC02397-201ENST00000504409 YARSP54577 528 aaKnown RBP6.35□□□□□ -1.39
LINC02397-201ENST00000504409 NCAPHQ15003 741 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 HIF1AQ16665 826 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 COBLL1Q53SF7 1204 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 DHDDSQ86SQ9 333 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 ATL1Q8WXF7 558 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 YME1L1Q96TA2 773 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 EEF2KO00418 725 aaKnown RBP6.35□□□□□ -1.39
LINC02397-201ENST00000504409 MCL1Q07820 350 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 GRIK3Q13003 919 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 TNNI3KQ59H18 835 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 SLC12A5Q9H2X9 1139 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 MANSC1Q9H8J5 431 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 SHOC2Q9UQ13 582 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 ANKRD6Q9Y2G4 727 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 FPGT-TNNI3KV9GXZ4 949 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 ATP9AO75110 1047 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 AKAP5P24588 427 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 ATP6V1E1P36543 226 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 KYAT3Q6YP21 454 aaKnown RBP6.35□□□□□ -1.39
LINC02397-201ENST00000504409 USP13Q92995 863 aaPredicted RBP6.35□□□□□ -1.39
LINC02397-201ENST00000504409 FAM213AQ9BRX8 229 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 ADD3Q9UEY8 706 aaKnown RBP6.35□□□□□ -1.39
LINC02397-201ENST00000504409 ZNF609O15014 1411 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 C5orf60A6NFR6 353 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 ITGAXP20702 1163 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 PTGS2P35354 604 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 SLC10A5Q5PT55 438 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 DPY19L2Q6NUT2 758 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 GGT6Q6P531 493 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 SGMS1Q86VZ5 419 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 LRRC6Q86X45 466 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 AHI1Q8N157 1196 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 COPRSQ9NQ92 184 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 CHD4Q14839 1912 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 MEGF6O75095 1541 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 MRPS14O60783 128 aaKnown RBP6.35□□□□□ -1.39
LINC02397-201ENST00000504409 ZNF135P52742 658 aaPredicted RBP6.35□□□□□ -1.39
LINC02397-201ENST00000504409 GEMIN4P57678 1058 aaKnown RBP6.35□□□□□ -1.39
LINC02397-201ENST00000504409 ECT2LQ008S8 904 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 NECTIN1Q15223 517 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 BROXQ5VW32 411 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 SCARA3Q6AZY7 606 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 BLIDQ8IZY5 108 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 EFHBQ8N7U6 833 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 RPRD1BQ9NQG5 326 aaKnown RBP6.35□□□□□ -1.39
LINC02397-201ENST00000504409 IGSF9Q9P2J2 1179 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 MYH3P11055 1940 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 DEPDC5O75140 1603 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 A0A1W2PRG6 482 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 RBM47A0AV96 593 aaKnown RBP6.35□□□□□ -1.39
LINC02397-201ENST00000504409 B8ZZF3 427 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 PDIA3P30101 505 aaKnown RBP6.35□□□□□ -1.39
LINC02397-201ENST00000504409 ADCY1Q08828 1119 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 TRIP10Q15642 601 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 UAP1Q16222 522 aaPredicted RBP6.35□□□□□ -1.39
LINC02397-201ENST00000504409 BORAQ6PGQ7 559 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 ARHGEF19Q8IW93 802 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 ZCCHC7Q8N3Z6 543 aaKnown RBP6.35□□□□□ -1.39
LINC02397-201ENST00000504409 SLC26A7Q8TE54 656 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 SPATA16Q9BXB7 569 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 KLHL3Q9UH77 587 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 ZBTB39O15060 712 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 VNN2O95498 520 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 S100A6P06703 90 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 KRT19P08727 400 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 FAM26FQ5R3K3 315 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 ALKBH5Q6P6C2 394 aaKnown RBP6.35□□□□□ -1.39
LINC02397-201ENST00000504409 RHOT1Q8IXI2 618 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 MGARPQ8TDB4 240 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 SERPINB13Q9UIV8 391 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 ANAPC2Q9UJX6 822 aa6.35□□□□□ -1.39
LINC02397-201ENST00000504409 FAM237AA0A1B0GTK4 181 aa6.34□□□□□ -1.39
LINC02397-201ENST00000504409 PSMD12O00232 456 aaPredicted RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms