RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 NOTCH4Q99466 2003 aa9.93□□□□□ -0.82
DHFR-202ENST00000504396 ACKR2O00590 384 aa9.93□□□□□ -0.82
DHFR-202ENST00000504396 ZNF197O14709 1029 aa9.93□□□□□ -0.82
DHFR-202ENST00000504396 BMP2P12643 396 aa9.93□□□□□ -0.82
DHFR-202ENST00000504396 MYL4P12829 197 aa9.93□□□□□ -0.82
DHFR-202ENST00000504396 IGFBP6P24592 240 aaPredicted RBP9.93□□□□□ -0.82
DHFR-202ENST00000504396 MCM7P33993 719 aa9.93□□□□□ -0.82
DHFR-202ENST00000504396 NAMPTP43490 491 aa9.93□□□□□ -0.82
DHFR-202ENST00000504396 CCR3P51677 355 aa9.93□□□□□ -0.82
DHFR-202ENST00000504396 ANKRD1Q15327 319 aa9.93□□□□□ -0.82
DHFR-202ENST00000504396 UPP1Q16831 310 aa9.93□□□□□ -0.82
DHFR-202ENST00000504396 ST3GAL2Q16842 350 aa9.93□□□□□ -0.82
DHFR-202ENST00000504396 PPM1JQ5JR12 505 aa9.93□□□□□ -0.82
DHFR-202ENST00000504396 FAM78AQ5JUQ0 283 aa9.93□□□□□ -0.82
DHFR-202ENST00000504396 CYP4A22Q5TCH4 519 aa9.93□□□□□ -0.82
DHFR-202ENST00000504396 ATF7IP2Q5U623 682 aa9.93□□□□□ -0.82
DHFR-202ENST00000504396 LAIR1Q6GTX8 287 aa9.93□□□□□ -0.82
DHFR-202ENST00000504396 IQCEQ6IPM2 695 aa9.93□□□□□ -0.82
DHFR-202ENST00000504396 YAF2Q8IY57 180 aa9.93□□□□□ -0.82
DHFR-202ENST00000504396 C3orf58Q8NDZ4 430 aa9.93□□□□□ -0.82
DHFR-202ENST00000504396 ERMNQ8TAM6 284 aa9.93□□□□□ -0.82
DHFR-202ENST00000504396 TNFRSF25Q93038 417 aa9.93□□□□□ -0.82
DHFR-202ENST00000504396 TCEAL4Q96EI5 215 aa9.93□□□□□ -0.82
DHFR-202ENST00000504396 NACC1Q96RE7 527 aa9.93□□□□□ -0.82
DHFR-202ENST00000504396 IER2Q9BTL4 223 aa9.93□□□□□ -0.82
DHFR-202ENST00000504396 CCDC94Q9BW85 323 aaPredicted RBP9.93□□□□□ -0.82
DHFR-202ENST00000504396 CHRDQ9H2X0 955 aa9.93□□□□□ -0.82
DHFR-202ENST00000504396 LMAN1LQ9HAT1 526 aa9.93□□□□□ -0.82
DHFR-202ENST00000504396 TOPORSQ9NS56 1045 aaPredicted RBP9.93□□□□□ -0.82
DHFR-202ENST00000504396 TPCN1Q9ULQ1 816 aa9.93□□□□□ -0.82
DHFR-202ENST00000504396 WDR87Q6ZQQ6 2873 aa9.92□□□□□ -0.82
DHFR-202ENST00000504396 WDR27A2RRH5 827 aa9.92□□□□□ -0.82
DHFR-202ENST00000504396 SOBPA7XYQ1 873 aa9.92□□□□□ -0.82
DHFR-202ENST00000504396 BTBD18B2RXH4 712 aa9.92□□□□□ -0.82
DHFR-202ENST00000504396 PODXLO00592 558 aa9.92□□□□□ -0.82
DHFR-202ENST00000504396 ZNF263O14978 683 aa9.92□□□□□ -0.82
DHFR-202ENST00000504396 MED24O75448 989 aa9.92□□□□□ -0.82
DHFR-202ENST00000504396 EDN1P05305 212 aa9.92□□□□□ -0.82
DHFR-202ENST00000504396 HARSP12081 509 aaKnown RBP9.92□□□□□ -0.82
DHFR-202ENST00000504396 CPB1P15086 417 aa9.92□□□□□ -0.82
DHFR-202ENST00000504396 PSMC3P17980 439 aa9.92□□□□□ -0.82
DHFR-202ENST00000504396 MUTP22033 750 aa9.92□□□□□ -0.82
DHFR-202ENST00000504396 SIM2Q14190 667 aaPredicted RBP9.92□□□□□ -0.82
DHFR-202ENST00000504396 ZNF568Q3ZCX4 644 aa9.92□□□□□ -0.82
DHFR-202ENST00000504396 CTXN3Q4LDR2 81 aa9.92□□□□□ -0.82
DHFR-202ENST00000504396 HEATR6Q6AI08 1181 aaKnown RBP9.92□□□□□ -0.82
DHFR-202ENST00000504396 TREML4Q6UXN2 200 aa9.92□□□□□ -0.82
DHFR-202ENST00000504396 CATSPER3Q86XQ3 398 aa9.92□□□□□ -0.82
DHFR-202ENST00000504396 DIS3L2Q8IYB7 885 aaKnown RBP9.92□□□□□ -0.82
DHFR-202ENST00000504396 CELF5Q8N6W0 485 aaKnown RBP9.92□□□□□ -0.82
DHFR-202ENST00000504396 ZNF461Q8TAF7 563 aa9.92□□□□□ -0.82
DHFR-202ENST00000504396 FAM200AQ8TCP9 573 aa9.92□□□□□ -0.82
DHFR-202ENST00000504396 NETO1Q8TDF5 533 aa9.92□□□□□ -0.82
DHFR-202ENST00000504396 CSGALNACT1Q8TDX6 532 aa9.92□□□□□ -0.82
DHFR-202ENST00000504396 NELL1Q92832 810 aa9.92□□□□□ -0.82
DHFR-202ENST00000504396 ZNF512Q96ME7 567 aaPredicted RBP9.92□□□□□ -0.82
DHFR-202ENST00000504396 PPP1R10Q96QC0 940 aaKnown RBP9.92□□□□□ -0.82
DHFR-202ENST00000504396 MTMR9Q96QG7 549 aa9.92□□□□□ -0.82
DHFR-202ENST00000504396 CCDC113Q9H0I3 377 aa9.92□□□□□ -0.82
DHFR-202ENST00000504396 POLD4Q9HCU8 107 aa9.92□□□□□ -0.82
DHFR-202ENST00000504396 TMPRSS4Q9NRS4 437 aa9.92□□□□□ -0.82
DHFR-202ENST00000504396 SLC38A7Q9NVC3 462 aa9.92□□□□□ -0.82
DHFR-202ENST00000504396 INSL5Q9Y5Q6 135 aa9.92□□□□□ -0.82
DHFR-202ENST00000504396 TRIP11Q15643 1979 aa9.92□□□□□ -0.82
DHFR-202ENST00000504396 SMIM28A0A1B0GU29 152 aa9.91□□□□□ -0.82
DHFR-202ENST00000504396 ARHGEF37A1IGU5 675 aa9.91□□□□□ -0.82
DHFR-202ENST00000504396 CCDC169A6NNP5 214 aa9.91□□□□□ -0.82
DHFR-202ENST00000504396 H7C4K7 107 aa9.91□□□□□ -0.82
DHFR-202ENST00000504396 MICAL2O94851 1124 aa9.91□□□□□ -0.82
DHFR-202ENST00000504396 CTDNEP1O95476 244 aa9.91□□□□□ -0.82
DHFR-202ENST00000504396 ADRB1P08588 477 aa9.91□□□□□ -0.82
DHFR-202ENST00000504396 SPATA31C1P0DKV0 1188 aa9.91□□□□□ -0.82
DHFR-202ENST00000504396 ATF2P15336 505 aa9.91□□□□□ -0.82
DHFR-202ENST00000504396 GJA1P17302 382 aa9.91□□□□□ -0.82
DHFR-202ENST00000504396 FCARP24071 287 aa9.91□□□□□ -0.82
DHFR-202ENST00000504396 CCNE1P24864 410 aa9.91□□□□□ -0.82
DHFR-202ENST00000504396 MCM4P33991 863 aa9.91□□□□□ -0.82
DHFR-202ENST00000504396 VIPR2P41587 438 aa9.91□□□□□ -0.82
DHFR-202ENST00000504396 CXCL12P48061 93 aa9.91□□□□□ -0.82
DHFR-202ENST00000504396 KPNA1P52294 538 aaPredicted RBP9.91□□□□□ -0.82
DHFR-202ENST00000504396 EFNA5P52803 228 aa9.91□□□□□ -0.82
DHFR-202ENST00000504396 SATB1Q01826 763 aa9.91□□□□□ -0.82
DHFR-202ENST00000504396 TWF1Q12792 350 aa9.91□□□□□ -0.82
DHFR-202ENST00000504396 ORC2Q13416 577 aaPredicted RBP9.91□□□□□ -0.82
DHFR-202ENST00000504396 PRSS36Q5K4E3 855 aa9.91□□□□□ -0.82
DHFR-202ENST00000504396 SLC8B1Q6J4K2 584 aa9.91□□□□□ -0.82
DHFR-202ENST00000504396 VITQ6UXI7 678 aa9.91□□□□□ -0.82
DHFR-202ENST00000504396 CEP68Q76N32 757 aa9.91□□□□□ -0.82
DHFR-202ENST00000504396 CEP120Q8N960 986 aa9.91□□□□□ -0.82
DHFR-202ENST00000504396 NECAB1Q8N987 351 aa9.91□□□□□ -0.82
DHFR-202ENST00000504396 ZSCAN18Q8TBC5 510 aaPredicted RBP9.91□□□□□ -0.82
DHFR-202ENST00000504396 SMARCD2Q92925 531 aa9.91□□□□□ -0.82
DHFR-202ENST00000504396 ASB16Q96NS5 453 aa9.91□□□□□ -0.82
DHFR-202ENST00000504396 POLR3CQ9BUI4 534 aaPredicted RBP9.91□□□□□ -0.82
DHFR-202ENST00000504396 ZNF334Q9HCZ1 680 aaPredicted RBP9.91□□□□□ -0.82
DHFR-202ENST00000504396 ASAH2Q9NR71 780 aa9.91□□□□□ -0.82
DHFR-202ENST00000504396 PDCD11Q14690 1871 aaKnown RBP9.91□□□□□ -0.82
DHFR-202ENST00000504396 PHLPP2Q6ZVD8 1323 aa9.91□□□□□ -0.82
DHFR-202ENST00000504396 SLC38A8A6NNN8 435 aa9.9□□□□□ -0.82
DHFR-202ENST00000504396 ESPNB1AK53 854 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms