RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 DNAI2Q9GZS0 605 aa10.42□□□□□ -0.74
COL1A1-210ENST00000504289 AMACRQ9UHK6 382 aa10.42□□□□□ -0.74
COL1A1-210ENST00000504289 GNEQ9Y223 722 aaKnown RBP10.42□□□□□ -0.74
COL1A1-210ENST00000504289 ANK1P16157 1881 aa10.41□□□□□ -0.74
COL1A1-210ENST00000504289 TMEM191CA6NGB0 347 aa10.41□□□□□ -0.74
COL1A1-210ENST00000504289 TMEM110-MUSTN1A8MSY1 372 aa10.41□□□□□ -0.74
COL1A1-210ENST00000504289 LACTBL1A8MY62 500 aa10.41□□□□□ -0.74
COL1A1-210ENST00000504289 AGPSO00116 658 aa10.41□□□□□ -0.74
COL1A1-210ENST00000504289 POLR3GO15318 223 aaPredicted RBP10.41□□□□□ -0.74
COL1A1-210ENST00000504289 TSPAN1O60635 241 aa10.41□□□□□ -0.74
COL1A1-210ENST00000504289 RNF40O75150 1001 aa10.41□□□□□ -0.74
COL1A1-210ENST00000504289 IGHA2P01877 340 aa10.41□□□□□ -0.74
COL1A1-210ENST00000504289 HMGCRP04035 888 aa10.41□□□□□ -0.74
COL1A1-210ENST00000504289 IQCF3P0C7M6 154 aa10.41□□□□□ -0.74
COL1A1-210ENST00000504289 PYGMP11217 842 aa10.41□□□□□ -0.74
COL1A1-210ENST00000504289 ECHS1P30084 290 aa10.41□□□□□ -0.74
COL1A1-210ENST00000504289 CYP2C19P33261 490 aa10.41□□□□□ -0.74
COL1A1-210ENST00000504289 PTPN7P35236 360 aa10.41□□□□□ -0.74
COL1A1-210ENST00000504289 COILP38432 576 aaPredicted RBP10.41□□□□□ -0.74
COL1A1-210ENST00000504289 GGCXP38435 758 aa10.41□□□□□ -0.74
COL1A1-210ENST00000504289 PTGIRP43119 386 aa10.41□□□□□ -0.74
COL1A1-210ENST00000504289 EIF3BP55884 814 aaKnown RBP10.41□□□□□ -0.74
COL1A1-210ENST00000504289 IGBP1P78318 339 aa10.41□□□□□ -0.74
COL1A1-210ENST00000504289 LACTBP83111 547 aaPredicted RBP10.41□□□□□ -0.74
COL1A1-210ENST00000504289 CAV1Q03135 178 aa10.41□□□□□ -0.74
COL1A1-210ENST00000504289 LMNB2Q03252 620 aa10.41□□□□□ -0.74
COL1A1-210ENST00000504289 INCA1Q0VD86 236 aa10.41□□□□□ -0.74
COL1A1-210ENST00000504289 HLTFQ14527 1009 aaKnown RBP eCLIP10.41□□□□□ -0.74
COL1A1-210ENST00000504289 TMEM132DQ14C87 1099 aa10.41□□□□□ -0.74
COL1A1-210ENST00000504289 POLNQ7Z5Q5 900 aa10.41□□□□□ -0.74
COL1A1-210ENST00000504289 JAMLQ86YT9 394 aa10.41□□□□□ -0.74
COL1A1-210ENST00000504289 RCOR2Q8IZ40 523 aa10.41□□□□□ -0.74
COL1A1-210ENST00000504289 C1orf127Q8N9H9 656 aa10.41□□□□□ -0.74
COL1A1-210ENST00000504289 C3orf20Q8ND61 904 aa10.41□□□□□ -0.74
COL1A1-210ENST00000504289 CXorf38Q8TB03 319 aa10.41□□□□□ -0.74
COL1A1-210ENST00000504289 NLRP7Q8WX94 980 aa10.41□□□□□ -0.74
COL1A1-210ENST00000504289 MAGOHBQ96A72 148 aaKnown RBP10.41□□□□□ -0.74
COL1A1-210ENST00000504289 FAM212AQ96EL1 285 aa10.41□□□□□ -0.74
COL1A1-210ENST00000504289 DDX27Q96GQ7 796 aaKnown RBP10.41□□□□□ -0.74
COL1A1-210ENST00000504289 RBM41Q96IZ5 413 aaKnown RBP10.41□□□□□ -0.74
COL1A1-210ENST00000504289 ADAMTS10Q9H324 1103 aa10.41□□□□□ -0.74
COL1A1-210ENST00000504289 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.41□□□□□ -0.74
COL1A1-210ENST00000504289 DDX56Q9NY93 547 aaKnown RBP10.41□□□□□ -0.74
COL1A1-210ENST00000504289 ZHX1Q9UKY1 873 aaPredicted RBP10.41□□□□□ -0.74
COL1A1-210ENST00000504289 EFR3BQ9Y2G0 817 aa10.41□□□□□ -0.74
COL1A1-210ENST00000504289 UMODL1Q5DID0 1318 aa10.4□□□□□ -0.74
COL1A1-210ENST00000504289 PASKQ96RG2 1323 aa10.4□□□□□ -0.74
COL1A1-210ENST00000504289 TCRBV5S1A1TA0A578 114 aa10.4□□□□□ -0.74
COL1A1-210ENST00000504289 HAS3O00219 553 aa10.4□□□□□ -0.74
COL1A1-210ENST00000504289 TLR3O15455 904 aaKnown RBP10.4□□□□□ -0.74
COL1A1-210ENST00000504289 TTI1O43156 1089 aa10.4□□□□□ -0.74
COL1A1-210ENST00000504289 ATMINO43313 823 aaPredicted RBP10.4□□□□□ -0.74
COL1A1-210ENST00000504289 PPFIA2O75334 1257 aa10.4□□□□□ -0.74
COL1A1-210ENST00000504289 CILPO75339 1184 aa10.4□□□□□ -0.74
COL1A1-210ENST00000504289 FAM163BP0C2L3 166 aa10.4□□□□□ -0.74
COL1A1-210ENST00000504289 ZNF286BP0CG31 522 aa10.4□□□□□ -0.74
COL1A1-210ENST00000504289 CXCL8P10145 99 aa10.4□□□□□ -0.74
COL1A1-210ENST00000504289 VDRP11473 427 aa10.4□□□□□ -0.74
COL1A1-210ENST00000504289 GNAT1P11488 350 aa10.4□□□□□ -0.74
COL1A1-210ENST00000504289 RGS2P41220 211 aa10.4□□□□□ -0.74
COL1A1-210ENST00000504289 HUNKP57058 714 aa10.4□□□□□ -0.74
COL1A1-210ENST00000504289 SNX16P57768 344 aa10.4□□□□□ -0.74
COL1A1-210ENST00000504289 MYO1EQ12965 1108 aa10.4□□□□□ -0.74
COL1A1-210ENST00000504289 ZNF268Q14587 947 aaPredicted RBP10.4□□□□□ -0.74
COL1A1-210ENST00000504289 CNGA2Q16280 664 aa10.4□□□□□ -0.74
COL1A1-210ENST00000504289 SLC10A6Q3KNW5 377 aa10.4□□□□□ -0.74
COL1A1-210ENST00000504289 SEZ6Q53EL9 994 aa10.4□□□□□ -0.74
COL1A1-210ENST00000504289 PPP1R15BQ5SWA1 713 aa10.4□□□□□ -0.74
COL1A1-210ENST00000504289 TMEM63BQ5T3F8 832 aa10.4□□□□□ -0.74
COL1A1-210ENST00000504289 JADE1Q6IE81 842 aa10.4□□□□□ -0.74
COL1A1-210ENST00000504289 NOTUMQ6P988 496 aa10.4□□□□□ -0.74
COL1A1-210ENST00000504289 SLC27A1Q6PCB7 646 aa10.4□□□□□ -0.74
COL1A1-210ENST00000504289 DRICH1Q6PGQ1 229 aaPredicted RBP10.4□□□□□ -0.74
COL1A1-210ENST00000504289 CCDC137Q6PK04 289 aaKnown RBP10.4□□□□□ -0.74
COL1A1-210ENST00000504289 C17orf99Q6UX52 265 aa10.4□□□□□ -0.74
COL1A1-210ENST00000504289 RUFY4Q6ZNE9 571 aa10.4□□□□□ -0.74
COL1A1-210ENST00000504289 MMS22LQ6ZRQ5 1243 aa10.4□□□□□ -0.74
COL1A1-210ENST00000504289 CEP128Q6ZU80 1094 aa10.4□□□□□ -0.74
COL1A1-210ENST00000504289 ERICH1Q86X53 443 aa10.4□□□□□ -0.74
COL1A1-210ENST00000504289 LRRC52Q8N7C0 313 aa10.4□□□□□ -0.74
COL1A1-210ENST00000504289 NPLOC4Q8TAT6 608 aa10.4□□□□□ -0.74
COL1A1-210ENST00000504289 FAM76AQ8TAV0 307 aa10.4□□□□□ -0.74
COL1A1-210ENST00000504289 CCHCR1Q8TD31 782 aa10.4□□□□□ -0.74
COL1A1-210ENST00000504289 NCAPGQ9BPX3 1015 aa10.4□□□□□ -0.74
COL1A1-210ENST00000504289 C11orf70Q9BRQ4 267 aa10.4□□□□□ -0.74
COL1A1-210ENST00000504289 FRMD8P1Q9BZ68 369 aaPredicted RBP10.4□□□□□ -0.74
COL1A1-210ENST00000504289 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.4□□□□□ -0.74
COL1A1-210ENST00000504289 VPS18Q9P253 973 aa10.4□□□□□ -0.74
COL1A1-210ENST00000504289 MTRF1LQ9UGC7 380 aaKnown RBP10.4□□□□□ -0.74
COL1A1-210ENST00000504289 SIX4Q9UIU6 781 aa10.4□□□□□ -0.74
COL1A1-210ENST00000504289 BARX2Q9UMQ3 279 aaPredicted RBP10.4□□□□□ -0.74
COL1A1-210ENST00000504289 FAN1Q9Y2M0 1017 aa10.4□□□□□ -0.74
COL1A1-210ENST00000504289 TRPM7Q96QT4 1865 aa10.4□□□□□ -0.75
COL1A1-210ENST00000504289 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.39□□□□□ -0.75
COL1A1-210ENST00000504289 ESYT3A0FGR9 886 aa10.39□□□□□ -0.75
COL1A1-210ENST00000504289 GOLGA6CA6NDK9 693 aa10.39□□□□□ -0.75
COL1A1-210ENST00000504289 GOLGA6L10A6NI86 522 aa10.39□□□□□ -0.75
COL1A1-210ENST00000504289 SIGLEC16A6NMB1 481 aa10.39□□□□□ -0.75
COL1A1-210ENST00000504289 HMGB1P1B2RPK0 211 aaPredicted RBP10.39□□□□□ -0.75
COL1A1-210ENST00000504289 KIF3CO14782 793 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms