RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 PDGFRBP09619 1106 aa17.32■□□□□ 0.36
PCDHA1-203ENST00000504120 PDAP1Q13442 181 aaKnown RBP17.32■□□□□ 0.36
PCDHA1-203ENST00000504120 USP10Q14694 798 aaKnown RBP17.32■□□□□ 0.36
PCDHA1-203ENST00000504120 OR9Q1Q8NGQ5 310 aa17.32■□□□□ 0.36
PCDHA1-203ENST00000504120 SCFD2Q8WU76 684 aa17.32■□□□□ 0.36
PCDHA1-203ENST00000504120 DCUN1D1Q96GG9 259 aa17.32■□□□□ 0.36
PCDHA1-203ENST00000504120 FRMD8Q9BZ67 464 aaPredicted RBP17.32■□□□□ 0.36
PCDHA1-203ENST00000504120 TLR2O60603 784 aa17.31■□□□□ 0.36
PCDHA1-203ENST00000504120 SNRPAP09012 282 aaKnown RBP17.31■□□□□ 0.36
PCDHA1-203ENST00000504120 MUTP22033 750 aa17.31■□□□□ 0.36
PCDHA1-203ENST00000504120 EFHC1Q5JVL4 640 aa17.31■□□□□ 0.36
PCDHA1-203ENST00000504120 NYAP1Q6ZVC0 841 aa17.31■□□□□ 0.36
PCDHA1-203ENST00000504120 CCDC90BQ9GZT6 254 aa17.31■□□□□ 0.36
PCDHA1-203ENST00000504120 NPHS2Q9NP85 383 aa17.31■□□□□ 0.36
PCDHA1-203ENST00000504120 SMARCAL1Q9NZC9 954 aa17.31■□□□□ 0.36
PCDHA1-203ENST00000504120 PCSK1P29120 753 aa17.31■□□□□ 0.36
PCDHA1-203ENST00000504120 GTF2H1P32780 548 aa17.31■□□□□ 0.36
PCDHA1-203ENST00000504120 CARSP49589 748 aaKnown RBP17.31■□□□□ 0.36
PCDHA1-203ENST00000504120 INPP5AQ14642 412 aa17.31■□□□□ 0.36
PCDHA1-203ENST00000504120 AGBL1Q96MI9 1066 aa17.31■□□□□ 0.36
PCDHA1-203ENST00000504120 TBX20Q9UMR3 447 aa17.31■□□□□ 0.36
PCDHA1-203ENST00000504120 MSH4O15457 936 aa17.31■□□□□ 0.36
PCDHA1-203ENST00000504120 GAS2O43903 313 aaKnown RBP17.31■□□□□ 0.36
PCDHA1-203ENST00000504120 ITGA8P53708 1063 aa17.31■□□□□ 0.36
PCDHA1-203ENST00000504120 SYCP2LQ5T4T6 812 aa17.31■□□□□ 0.36
PCDHA1-203ENST00000504120 ANGEL2Q5VTE6 544 aaKnown RBP17.31■□□□□ 0.36
PCDHA1-203ENST00000504120 KDELC2Q7Z4H8 507 aa17.31■□□□□ 0.36
PCDHA1-203ENST00000504120 HNRNPLLQ8WVV9 542 aaKnown RBP17.31■□□□□ 0.36
PCDHA1-203ENST00000504120 STAMBPL1Q96FJ0 436 aa17.31■□□□□ 0.36
PCDHA1-203ENST00000504120 CHMP2BQ9UQN3 213 aa17.31■□□□□ 0.36
PCDHA1-203ENST00000504120 CST8O60676 142 aa17.31■□□□□ 0.36
PCDHA1-203ENST00000504120 TADA2AO75478 443 aa17.31■□□□□ 0.36
PCDHA1-203ENST00000504120 RPS12P25398 132 aaKnown RBP17.31■□□□□ 0.36
PCDHA1-203ENST00000504120 SNX17Q15036 470 aa17.31■□□□□ 0.36
PCDHA1-203ENST00000504120 EFCAB12Q6NXP0 572 aa17.31■□□□□ 0.36
PCDHA1-203ENST00000504120 C3orf62Q6ZUJ4 267 aa17.31■□□□□ 0.36
PCDHA1-203ENST00000504120 CALML6Q8TD86 181 aa17.31■□□□□ 0.36
PCDHA1-203ENST00000504120 ZIM3Q96PE6 472 aa17.31■□□□□ 0.36
PCDHA1-203ENST00000504120 FAM167BQ9BTA0 163 aa17.31■□□□□ 0.36
PCDHA1-203ENST00000504120 DYRK4Q9NR20 520 aa17.31■□□□□ 0.36
PCDHA1-203ENST00000504120 EHD2Q9NZN4 543 aa17.31■□□□□ 0.36
PCDHA1-203ENST00000504120 PCDHB8Q9UN66 801 aa17.31■□□□□ 0.36
PCDHA1-203ENST00000504120 ZC3H4Q9UPT8 1303 aaKnown RBP17.3■□□□□ 0.36
PCDHA1-203ENST00000504120 PHF20L1A8MW92 1017 aa17.3■□□□□ 0.36
PCDHA1-203ENST00000504120 MTSS1O43312 755 aa17.3■□□□□ 0.36
PCDHA1-203ENST00000504120 COILP38432 576 aaPredicted RBP17.3■□□□□ 0.36
PCDHA1-203ENST00000504120 HDAC4P56524 1084 aa17.3■□□□□ 0.36
PCDHA1-203ENST00000504120 GRB10Q13322 594 aa17.3■□□□□ 0.36
PCDHA1-203ENST00000504120 OR2W6PQ8NHA6 318 aa17.3■□□□□ 0.36
PCDHA1-203ENST00000504120 DNAJC7Q99615 494 aa17.3■□□□□ 0.36
PCDHA1-203ENST00000504120 ARHGAP26Q9UNA1 814 aa17.3■□□□□ 0.36
PCDHA1-203ENST00000504120 POLBP06746 335 aa17.3■□□□□ 0.36
PCDHA1-203ENST00000504120 WEE2P0C1S8 567 aa17.3■□□□□ 0.36
PCDHA1-203ENST00000504120 HMOX2P30519 316 aa17.3■□□□□ 0.36
PCDHA1-203ENST00000504120 FNTAP49354 379 aa17.3■□□□□ 0.36
PCDHA1-203ENST00000504120 THEMIS2Q5TEJ8 643 aa17.3■□□□□ 0.36
PCDHA1-203ENST00000504120 SRLQ86TD4 932 aa17.3■□□□□ 0.36
PCDHA1-203ENST00000504120 COG4Q9H9E3 785 aa17.3■□□□□ 0.36
PCDHA1-203ENST00000504120 RBP3P10745 1247 aa17.3■□□□□ 0.36
PCDHA1-203ENST00000504120 ITGA4P13612 1032 aa17.3■□□□□ 0.36
PCDHA1-203ENST00000504120 LSP1P33241 339 aa17.3■□□□□ 0.36
PCDHA1-203ENST00000504120 KYNUQ16719 465 aa17.3■□□□□ 0.36
PCDHA1-203ENST00000504120 ACAD10Q6JQN1 1059 aa17.3■□□□□ 0.36
PCDHA1-203ENST00000504120 PCMTD2Q9NV79 361 aa17.3■□□□□ 0.36
PCDHA1-203ENST00000504120 LSM7Q9UK45 103 aaKnown RBP17.3■□□□□ 0.36
PCDHA1-203ENST00000504120 MTO1Q9Y2Z2 717 aaKnown RBP17.3■□□□□ 0.36
PCDHA1-203ENST00000504120 ATMINO43313 823 aaPredicted RBP17.3■□□□□ 0.36
PCDHA1-203ENST00000504120 SLC37A4O43826 429 aa17.3■□□□□ 0.36
PCDHA1-203ENST00000504120 TTC39BQ5VTQ0 682 aaPredicted RBP17.3■□□□□ 0.36
PCDHA1-203ENST00000504120 PPIL6Q8IXY8 311 aa17.3■□□□□ 0.36
PCDHA1-203ENST00000504120 TPCN2Q8NHX9 752 aa17.3■□□□□ 0.36
PCDHA1-203ENST00000504120 ELMO2Q96JJ3 720 aa17.3■□□□□ 0.36
PCDHA1-203ENST00000504120 CATSPERBQ9H7T0 1116 aa17.3■□□□□ 0.36
PCDHA1-203ENST00000504120 MYOZ2Q9NPC6 264 aa17.3■□□□□ 0.36
PCDHA1-203ENST00000504120 TSR3Q9UJK0 312 aaKnown RBP17.3■□□□□ 0.36
PCDHA1-203ENST00000504120 TMEM120BA0PK00 339 aa17.29■□□□□ 0.36
PCDHA1-203ENST00000504120 KLHL2O95198 593 aa17.29■□□□□ 0.36
PCDHA1-203ENST00000504120 HIST1H2AGP0C0S8 130 aaPredicted RBP17.29■□□□□ 0.36
PCDHA1-203ENST00000504120 HIST1H2ADP20671 130 aa17.29■□□□□ 0.36
PCDHA1-203ENST00000504120 TAF1CQ15572 869 aaPredicted RBP17.29■□□□□ 0.36
PCDHA1-203ENST00000504120 GRAMD4Q6IC98 578 aa17.29■□□□□ 0.36
PCDHA1-203ENST00000504120 C16orf87Q6PH81 154 aa17.29■□□□□ 0.36
PCDHA1-203ENST00000504120 PRUNE1Q86TP1 453 aa17.29■□□□□ 0.36
PCDHA1-203ENST00000504120 NOA1Q8NC60 698 aaKnown RBP17.29■□□□□ 0.36
PCDHA1-203ENST00000504120 SEC16BQ96JE7 1060 aa17.29■□□□□ 0.36
PCDHA1-203ENST00000504120 HIST1H2AHQ96KK5 128 aa17.29■□□□□ 0.36
PCDHA1-203ENST00000504120 HIST1H2AJQ99878 128 aa17.29■□□□□ 0.36
PCDHA1-203ENST00000504120 H2AFJQ9BTM1 129 aa17.29■□□□□ 0.36
PCDHA1-203ENST00000504120 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.29■□□□□ 0.36
PCDHA1-203ENST00000504120 SLIT1O75093 1534 aa17.29■□□□□ 0.36
PCDHA1-203ENST00000504120 MROH1Q8NDA8 1641 aa17.29■□□□□ 0.36
PCDHA1-203ENST00000504120 ICAM1P05362 532 aa17.29■□□□□ 0.36
PCDHA1-203ENST00000504120 DYNC1I2Q13409 638 aaKnown RBP17.29■□□□□ 0.36
PCDHA1-203ENST00000504120 RAB42Q8N4Z0 105 aa17.29■□□□□ 0.36
PCDHA1-203ENST00000504120 KCNK16Q96T55 309 aa17.29■□□□□ 0.36
PCDHA1-203ENST00000504120 YIPF3Q9GZM5 350 aa17.29■□□□□ 0.36
PCDHA1-203ENST00000504120 TASP1Q9H6P5 420 aa17.29■□□□□ 0.36
PCDHA1-203ENST00000504120 FAM49BQ9NUQ9 324 aa17.29■□□□□ 0.36
PCDHA1-203ENST00000504120 RRN3P2A6NIE6 340 aa17.29■□□□□ 0.36
PCDHA1-203ENST00000504120 RPS6KA5O75582 802 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms