RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 MRPS25P82663 173 aaKnown RBP10.18□□□□□ -0.78
PDLIM5-207ENST00000503974 TNFAIP2Q03169 654 aa10.18□□□□□ -0.78
PDLIM5-207ENST00000503974 LMNB2Q03252 620 aa10.18□□□□□ -0.78
PDLIM5-207ENST00000503974 ARHGAP1Q07960 439 aa10.18□□□□□ -0.78
PDLIM5-207ENST00000503974 BNIP1Q12981 228 aa10.18□□□□□ -0.78
PDLIM5-207ENST00000503974 TUBA3CQ13748 450 aa10.18□□□□□ -0.78
PDLIM5-207ENST00000503974 DPYSQ14117 519 aa10.18□□□□□ -0.78
PDLIM5-207ENST00000503974 ADRM1Q16186 407 aa10.18□□□□□ -0.78
PDLIM5-207ENST00000503974 QPCTQ16769 361 aa10.18□□□□□ -0.78
PDLIM5-207ENST00000503974 ANO1Q5XXA6 986 aa10.18□□□□□ -0.78
PDLIM5-207ENST00000503974 LLGL2Q6P1M3 1020 aa10.18□□□□□ -0.78
PDLIM5-207ENST00000503974 TOGARAM2Q6ZUX3 1019 aa10.18□□□□□ -0.78
PDLIM5-207ENST00000503974 GIMAP8Q8ND71 665 aaPredicted RBP10.18□□□□□ -0.78
PDLIM5-207ENST00000503974 SDCCAG3Q96C92 435 aa10.18□□□□□ -0.78
PDLIM5-207ENST00000503974 ZNF577Q9BSK1 485 aa10.18□□□□□ -0.78
PDLIM5-207ENST00000503974 CCSER1Q9C0I3 900 aa10.18□□□□□ -0.78
PDLIM5-207ENST00000503974 MCOLN1Q9GZU1 580 aa10.18□□□□□ -0.78
PDLIM5-207ENST00000503974 SCAND2PQ9GZW5 306 aaPredicted RBP10.18□□□□□ -0.78
PDLIM5-207ENST00000503974 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.18□□□□□ -0.78
PDLIM5-207ENST00000503974 UPF3AQ9H1J1 476 aaKnown RBP10.18□□□□□ -0.78
PDLIM5-207ENST00000503974 HMX1Q9NP08 348 aaPredicted RBP10.18□□□□□ -0.78
PDLIM5-207ENST00000503974 SAMSN1Q9NSI8 373 aaKnown RBP10.18□□□□□ -0.78
PDLIM5-207ENST00000503974 TBC1D22BQ9NU19 505 aa10.18□□□□□ -0.78
PDLIM5-207ENST00000503974 NDFIP2Q9NV92 336 aa10.18□□□□□ -0.78
PDLIM5-207ENST00000503974 INTUQ9ULD6 942 aa10.18□□□□□ -0.78
PDLIM5-207ENST00000503974 TMA7Q9Y2S6 64 aaKnown RBP10.18□□□□□ -0.78
PDLIM5-207ENST00000503974 GPC6Q9Y625 555 aaPredicted RBP10.18□□□□□ -0.78
PDLIM5-207ENST00000503974 HTTP42858 3142 aa10.17□□□□□ -0.78
PDLIM5-207ENST00000503974 TTLL13PA6NNM8 815 aa10.17□□□□□ -0.78
PDLIM5-207ENST00000503974 MAGEB3O15480 346 aa10.17□□□□□ -0.78
PDLIM5-207ENST00000503974 DUSP11O75319 330 aaKnown RBP10.17□□□□□ -0.78
PDLIM5-207ENST00000503974 FARP2O94887 1054 aaPredicted RBP10.17□□□□□ -0.78
PDLIM5-207ENST00000503974 YEATS4O95619 227 aa10.17□□□□□ -0.78
PDLIM5-207ENST00000503974 CYP1A1P04798 512 aaPredicted RBP10.17□□□□□ -0.78
PDLIM5-207ENST00000503974 OR52Z1P0C646 297 aa10.17□□□□□ -0.78
PDLIM5-207ENST00000503974 COL6A2P12110 1019 aa10.17□□□□□ -0.78
PDLIM5-207ENST00000503974 MZF1P28698 734 aaPredicted RBP10.17□□□□□ -0.78
PDLIM5-207ENST00000503974 B2MP61769 119 aa10.17□□□□□ -0.78
PDLIM5-207ENST00000503974 DR1Q01658 176 aa10.17□□□□□ -0.78
PDLIM5-207ENST00000503974 SPIRE1Q08AE8 756 aa10.17□□□□□ -0.78
PDLIM5-207ENST00000503974 PAK2Q13177 524 aa10.17□□□□□ -0.78
PDLIM5-207ENST00000503974 PTGDRQ13258 359 aa10.17□□□□□ -0.78
PDLIM5-207ENST00000503974 KARSQ15046 597 aaKnown RBP10.17□□□□□ -0.78
PDLIM5-207ENST00000503974 CALCRLQ16602 461 aa10.17□□□□□ -0.78
PDLIM5-207ENST00000503974 LY6KQ17RY6 165 aa10.17□□□□□ -0.78
PDLIM5-207ENST00000503974 CELF3Q5SZQ8 465 aaKnown RBP10.17□□□□□ -0.78
PDLIM5-207ENST00000503974 METTL21CQ5VZV1 264 aa10.17□□□□□ -0.78
PDLIM5-207ENST00000503974 ARL6IP4Q66PJ3 421 aaKnown RBP10.17□□□□□ -0.78
PDLIM5-207ENST00000503974 ZNF746Q6NUN9 644 aaPredicted RBP10.17□□□□□ -0.78
PDLIM5-207ENST00000503974 METTL7BQ6UX53 244 aa10.17□□□□□ -0.78
PDLIM5-207ENST00000503974 VPS36Q86VN1 386 aa10.17□□□□□ -0.78
PDLIM5-207ENST00000503974 TREML1Q86YW5 311 aa10.17□□□□□ -0.78
PDLIM5-207ENST00000503974 CCNJLQ8IV13 435 aa10.17□□□□□ -0.78
PDLIM5-207ENST00000503974 SLFN12Q8IYM2 578 aa10.17□□□□□ -0.78
PDLIM5-207ENST00000503974 SH2D3CQ8N5H7 860 aa10.17□□□□□ -0.78
PDLIM5-207ENST00000503974 STARD8Q92502 1023 aa10.17□□□□□ -0.78
PDLIM5-207ENST00000503974 PRCCQ92733 491 aaPredicted RBP10.17□□□□□ -0.78
PDLIM5-207ENST00000503974 CEP63Q96MT8 703 aa10.17□□□□□ -0.78
PDLIM5-207ENST00000503974 CTTNBP2NLQ9P2B4 639 aa10.17□□□□□ -0.78
PDLIM5-207ENST00000503974 VAV3Q9UKW4 847 aa10.17□□□□□ -0.78
PDLIM5-207ENST00000503974 CLIC4Q9Y696 253 aa10.17□□□□□ -0.78
PDLIM5-207ENST00000503974 USH1CQ9Y6N9 552 aa10.17□□□□□ -0.78
PDLIM5-207ENST00000503974 MATN2O00339 956 aa10.16□□□□□ -0.78
PDLIM5-207ENST00000503974 TRAPPC3O43617 180 aa10.16□□□□□ -0.78
PDLIM5-207ENST00000503974 GGPS1O95749 300 aa10.16□□□□□ -0.78
PDLIM5-207ENST00000503974 GH1P01241 217 aa10.16□□□□□ -0.78
PDLIM5-207ENST00000503974 HOXD8P13378 290 aaPredicted RBP10.16□□□□□ -0.78
PDLIM5-207ENST00000503974 PTPN2P17706 415 aa10.16□□□□□ -0.78
PDLIM5-207ENST00000503974 NR1D1P20393 614 aa10.16□□□□□ -0.78
PDLIM5-207ENST00000503974 CETN2P41208 172 aa10.16□□□□□ -0.78
PDLIM5-207ENST00000503974 POLR2FP61218 127 aaKnown RBP10.16□□□□□ -0.78
PDLIM5-207ENST00000503974 RELAQ04206 551 aa10.16□□□□□ -0.78
PDLIM5-207ENST00000503974 MTMR3Q13615 1198 aa10.16□□□□□ -0.78
PDLIM5-207ENST00000503974 SPCS2Q15005 226 aa10.16□□□□□ -0.78
PDLIM5-207ENST00000503974 SLC39A14Q15043 492 aa10.16□□□□□ -0.78
PDLIM5-207ENST00000503974 LHX8Q68G74 356 aa10.16□□□□□ -0.78
PDLIM5-207ENST00000503974 VASH1Q7L8A9 365 aaPredicted RBP10.16□□□□□ -0.78
PDLIM5-207ENST00000503974 FAM186BQ8IYM0 893 aa10.16□□□□□ -0.78
PDLIM5-207ENST00000503974 KIAA1958Q8N8K9 716 aa10.16□□□□□ -0.78
PDLIM5-207ENST00000503974 LINC00301Q8NCQ3 95 aa10.16□□□□□ -0.78
PDLIM5-207ENST00000503974 UNC93B1Q9H1C4 597 aa10.16□□□□□ -0.78
PDLIM5-207ENST00000503974 MRPL44Q9H9J2 332 aaKnown RBP10.16□□□□□ -0.78
PDLIM5-207ENST00000503974 TCF7L2Q9NQB0 619 aa10.16□□□□□ -0.78
PDLIM5-207ENST00000503974 ACAD8Q9UKU7 415 aa10.16□□□□□ -0.78
PDLIM5-207ENST00000503974 KMOO15229 486 aa10.16□□□□□ -0.78
PDLIM5-207ENST00000503974 ADAMTS4O75173 837 aa10.16□□□□□ -0.78
PDLIM5-207ENST00000503974 DDX5P17844 614 aaKnown RBP10.16□□□□□ -0.78
PDLIM5-207ENST00000503974 CST5P28325 142 aaPredicted RBP10.16□□□□□ -0.78
PDLIM5-207ENST00000503974 ETFBP38117 255 aa10.16□□□□□ -0.78
PDLIM5-207ENST00000503974 FXR2P51116 673 aaKnown RBP eCLIP10.16□□□□□ -0.78
PDLIM5-207ENST00000503974 EMP3P54852 163 aa10.16□□□□□ -0.78
PDLIM5-207ENST00000503974 GJA9P57773 515 aa10.16□□□□□ -0.78
PDLIM5-207ENST00000503974 BASP1P80723 227 aaKnown RBP10.16□□□□□ -0.78
PDLIM5-207ENST00000503974 HSPA14Q0VDF9 509 aa10.16□□□□□ -0.78
PDLIM5-207ENST00000503974 PPP2R5CQ13362 524 aa10.16□□□□□ -0.78
PDLIM5-207ENST00000503974 LAMC2Q13753 1193 aa10.16□□□□□ -0.78
PDLIM5-207ENST00000503974 MTFR1Q15390 333 aa10.16□□□□□ -0.78
PDLIM5-207ENST00000503974 C15orf59Q2T9L4 293 aaPredicted RBP10.16□□□□□ -0.78
PDLIM5-207ENST00000503974 NXNQ6DKJ4 435 aa10.16□□□□□ -0.78
PDLIM5-207ENST00000503974 DGLUCYQ7Z3D6 616 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms