RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 CASP8AP2Q9UKL3 1982 aa12.72□□□□□ -0.37
NUP54-202ENST00000502850 ASB14A6NK59 587 aa12.72□□□□□ -0.37
NUP54-202ENST00000502850 ACKR2O00590 384 aa12.72□□□□□ -0.37
NUP54-202ENST00000502850 TLR3O15455 904 aaKnown RBP12.72□□□□□ -0.37
NUP54-202ENST00000502850 MED7O43513 233 aa12.72□□□□□ -0.37
NUP54-202ENST00000502850 FAM189A1O60320 539 aa12.72□□□□□ -0.37
NUP54-202ENST00000502850 KIAA0754O94854 1291 aa12.72□□□□□ -0.37
NUP54-202ENST00000502850 FAM107AO95990 144 aa12.72□□□□□ -0.37
NUP54-202ENST00000502850 ATF2P15336 505 aa12.72□□□□□ -0.37
NUP54-202ENST00000502850 MMP8P22894 467 aa12.72□□□□□ -0.37
NUP54-202ENST00000502850 POLR2BP30876 1174 aaKnown RBP12.72□□□□□ -0.37
NUP54-202ENST00000502850 WNT7BP56706 349 aa12.72□□□□□ -0.37
NUP54-202ENST00000502850 COPS2P61201 443 aa12.72□□□□□ -0.37
NUP54-202ENST00000502850 FKBP1BP68106 108 aa12.72□□□□□ -0.37
NUP54-202ENST00000502850 GUCY1A3Q02108 690 aa12.72□□□□□ -0.37
NUP54-202ENST00000502850 MAMLD1Q13495 774 aa12.72□□□□□ -0.37
NUP54-202ENST00000502850 TTLL4Q14679 1199 aa12.72□□□□□ -0.37
NUP54-202ENST00000502850 CCNG2Q16589 344 aa12.72□□□□□ -0.37
NUP54-202ENST00000502850 FOXR1Q6PIV2 292 aa12.72□□□□□ -0.37
NUP54-202ENST00000502850 TAOK1Q7L7X3 1001 aa12.72□□□□□ -0.37
NUP54-202ENST00000502850 NLRP14Q86W24 1093 aa12.72□□□□□ -0.37
NUP54-202ENST00000502850 DHX37Q8IY37 1157 aaKnown RBP12.72□□□□□ -0.37
NUP54-202ENST00000502850 CCDC89Q8N998 374 aa12.72□□□□□ -0.37
NUP54-202ENST00000502850 RNF149Q8NC42 400 aa12.72□□□□□ -0.37
NUP54-202ENST00000502850 OR5B17Q8NGF7 314 aa12.72□□□□□ -0.37
NUP54-202ENST00000502850 DCLK3Q9C098 648 aa12.72□□□□□ -0.37
NUP54-202ENST00000502850 RASSF4Q9H2L5 321 aa12.72□□□□□ -0.37
NUP54-202ENST00000502850 ELP3Q9H9T3 547 aa12.72□□□□□ -0.37
NUP54-202ENST00000502850 PNMA3Q9UL41 463 aa12.72□□□□□ -0.37
NUP54-202ENST00000502850 PCDHGC3Q9UN70 934 aa12.72□□□□□ -0.37
NUP54-202ENST00000502850 NOVA2Q9UNW9 492 aaKnown RBP12.72□□□□□ -0.37
NUP54-202ENST00000502850 DNAJC25-GNG10A0A024R161 153 aa12.71□□□□□ -0.37
NUP54-202ENST00000502850 FAM170AA1A519 330 aa12.71□□□□□ -0.37
NUP54-202ENST00000502850 RGS16O15492 202 aaPredicted RBP12.71□□□□□ -0.37
NUP54-202ENST00000502850 B4GALT4O60513 344 aa12.71□□□□□ -0.37
NUP54-202ENST00000502850 CNMDO75829 334 aa12.71□□□□□ -0.37
NUP54-202ENST00000502850 PROZP22891 400 aa12.71□□□□□ -0.37
NUP54-202ENST00000502850 EIF4BP23588 611 aaKnown RBP12.71□□□□□ -0.37
NUP54-202ENST00000502850 CDH5P33151 784 aaPredicted RBP12.71□□□□□ -0.37
NUP54-202ENST00000502850 MAGOHP61326 146 aaKnown RBP12.71□□□□□ -0.37
NUP54-202ENST00000502850 TNFAIP2Q03169 654 aa12.71□□□□□ -0.37
NUP54-202ENST00000502850 POU5F1BQ06416 359 aa12.71□□□□□ -0.37
NUP54-202ENST00000502850 PLCB4Q15147 1175 aa12.71□□□□□ -0.37
NUP54-202ENST00000502850 LY6KQ17RY6 165 aa12.71□□□□□ -0.37
NUP54-202ENST00000502850 ZNF699Q32M78 642 aa12.71□□□□□ -0.37
NUP54-202ENST00000502850 ZNF568Q3ZCX4 644 aa12.71□□□□□ -0.37
NUP54-202ENST00000502850 ZBTB41Q5SVQ8 909 aa12.71□□□□□ -0.37
NUP54-202ENST00000502850 ATF7IP2Q5U623 682 aa12.71□□□□□ -0.37
NUP54-202ENST00000502850 DNAJC24Q6P3W2 148 aa12.71□□□□□ -0.37
NUP54-202ENST00000502850 MMS22LQ6ZRQ5 1243 aa12.71□□□□□ -0.37
NUP54-202ENST00000502850 RCOR2Q8IZ40 523 aa12.71□□□□□ -0.37
NUP54-202ENST00000502850 ZDHHC14Q8IZN3 488 aa12.71□□□□□ -0.37
NUP54-202ENST00000502850 ZNF606Q8WXB4 792 aa12.71□□□□□ -0.37
NUP54-202ENST00000502850 PPM1EQ8WY54 764 aa12.71□□□□□ -0.37
NUP54-202ENST00000502850 SPATA33Q96N06 139 aa12.71□□□□□ -0.37
NUP54-202ENST00000502850 TRAIPQ9BWF2 469 aa12.71□□□□□ -0.37
NUP54-202ENST00000502850 FAM124BQ9H5Z6 455 aaPredicted RBP12.71□□□□□ -0.37
NUP54-202ENST00000502850 PRMT7Q9NVM4 692 aaPredicted RBP12.71□□□□□ -0.37
NUP54-202ENST00000502850 DDX56Q9NY93 547 aaKnown RBP12.71□□□□□ -0.37
NUP54-202ENST00000502850 PTPN22Q9Y2R2 807 aa12.71□□□□□ -0.37
NUP54-202ENST00000502850 ANK1P16157 1881 aa12.71□□□□□ -0.37
NUP54-202ENST00000502850 TCRBV7S2A1N4TA0A589 114 aa12.7□□□□□ -0.38
NUP54-202ENST00000502850 RIPK2O43353 540 aa12.7□□□□□ -0.38
NUP54-202ENST00000502850 EDN1P05305 212 aa12.7□□□□□ -0.38
NUP54-202ENST00000502850 SRGAP2CP0DJJ0 459 aa12.7□□□□□ -0.38
NUP54-202ENST00000502850 PTPN7P35236 360 aa12.7□□□□□ -0.38
NUP54-202ENST00000502850 MAGEA9P43362 315 aa12.7□□□□□ -0.38
NUP54-202ENST00000502850 PHKA2P46019 1235 aa12.7□□□□□ -0.38
NUP54-202ENST00000502850 KLF1Q13351 362 aaPredicted RBP12.7□□□□□ -0.38
NUP54-202ENST00000502850 PIGHQ14442 188 aaPredicted RBP12.7□□□□□ -0.38
NUP54-202ENST00000502850 TMEM132AQ24JP5 1023 aa12.7□□□□□ -0.38
NUP54-202ENST00000502850 ZNF484Q5JVG2 852 aa12.7□□□□□ -0.38
NUP54-202ENST00000502850 MFSD5Q6N075 450 aa12.7□□□□□ -0.38
NUP54-202ENST00000502850 ZNF365Q70YC5 407 aa12.7□□□□□ -0.38
NUP54-202ENST00000502850 ZBTB33Q86T24 672 aa12.7□□□□□ -0.38
NUP54-202ENST00000502850 PASD1Q8IV76 773 aa12.7□□□□□ -0.38
NUP54-202ENST00000502850 MYCBPAPQ8TBZ2 947 aa12.7□□□□□ -0.38
NUP54-202ENST00000502850 ZNF473Q8WTR7 871 aaKnown RBP12.7□□□□□ -0.38
NUP54-202ENST00000502850 CCDC114Q96M63 670 aa12.7□□□□□ -0.38
NUP54-202ENST00000502850 SCLT1Q96NL6 688 aa12.7□□□□□ -0.38
NUP54-202ENST00000502850 OSBPL8Q9BZF1 889 aa12.7□□□□□ -0.38
NUP54-202ENST00000502850 MTMR12Q9C0I1 747 aa12.7□□□□□ -0.38
NUP54-202ENST00000502850 EPB41L4BQ9H329 900 aa12.7□□□□□ -0.38
NUP54-202ENST00000502850 FZD8Q9H461 694 aa12.7□□□□□ -0.38
NUP54-202ENST00000502850 ERAP1Q9NZ08 941 aa12.7□□□□□ -0.38
NUP54-202ENST00000502850 TNFSF13BQ9Y275 285 aa12.7□□□□□ -0.38
NUP54-202ENST00000502850 COL1A2P08123 1366 aa12.7□□□□□ -0.38
NUP54-202ENST00000502850 A0A087WUV0 522 aaPredicted RBP12.7□□□□□ -0.38
NUP54-202ENST00000502850 GMNCA6NCL1 334 aa12.7□□□□□ -0.38
NUP54-202ENST00000502850 E7EVH7 732 aa12.7□□□□□ -0.38
NUP54-202ENST00000502850 MAGEB2O15479 319 aa12.7□□□□□ -0.38
NUP54-202ENST00000502850 TJP3O95049 919 aa12.7□□□□□ -0.38
NUP54-202ENST00000502850 SLC10A3P09131 477 aa12.7□□□□□ -0.38
NUP54-202ENST00000502850 SLC29A2Q14542 456 aa12.7□□□□□ -0.38
NUP54-202ENST00000502850 TTC19Q6DKK2 380 aaPredicted RBP12.7□□□□□ -0.38
NUP54-202ENST00000502850 DRICH1Q6PGQ1 229 aaPredicted RBP12.7□□□□□ -0.38
NUP54-202ENST00000502850 YTHDF3Q7Z739 585 aaKnown RBP12.7□□□□□ -0.38
NUP54-202ENST00000502850 RHPN2Q8IUC4 686 aa12.7□□□□□ -0.38
NUP54-202ENST00000502850 TTC39CQ8N584 583 aa12.7□□□□□ -0.38
NUP54-202ENST00000502850 NIPA2Q8N8Q9 360 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms