RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 GGA3Q9NZ52 723 aa10.46□□□□□ -0.74
CLIP1-204ENST00000501271 ASAP2O43150 1006 aa10.45□□□□□ -0.74
CLIP1-204ENST00000501271 ATP2C2O75185 946 aa10.45□□□□□ -0.74
CLIP1-204ENST00000501271 ASS1P00966 412 aaKnown RBP10.45□□□□□ -0.74
CLIP1-204ENST00000501271 CETPP11597 493 aa10.45□□□□□ -0.74
CLIP1-204ENST00000501271 KRT10P13645 584 aa10.45□□□□□ -0.74
CLIP1-204ENST00000501271 KLRC2P26717 231 aa10.45□□□□□ -0.74
CLIP1-204ENST00000501271 BAG6P46379 1132 aa10.45□□□□□ -0.74
CLIP1-204ENST00000501271 CAV1Q03135 178 aa10.45□□□□□ -0.74
CLIP1-204ENST00000501271 IZUMO3Q5VZ72 239 aa10.45□□□□□ -0.74
CLIP1-204ENST00000501271 ZNF365Q70YC5 407 aa10.45□□□□□ -0.74
CLIP1-204ENST00000501271 PIGWQ7Z7B1 504 aa10.45□□□□□ -0.74
CLIP1-204ENST00000501271 SUGP1Q8IWZ8 645 aaKnown RBP10.45□□□□□ -0.74
CLIP1-204ENST00000501271 GLIS1Q8NBF1 620 aa10.45□□□□□ -0.74
CLIP1-204ENST00000501271 CHST13Q8NET6 341 aa10.45□□□□□ -0.74
CLIP1-204ENST00000501271 MGARPQ8TDB4 240 aa10.45□□□□□ -0.74
CLIP1-204ENST00000501271 HOMER3Q9NSC5 361 aa10.45□□□□□ -0.74
CLIP1-204ENST00000501271 PARVAQ9NVD7 372 aa10.45□□□□□ -0.74
CLIP1-204ENST00000501271 OTOFQ9HC10 1997 aa10.45□□□□□ -0.74
CLIP1-204ENST00000501271 TCRBV5S1A1TA0A578 114 aa10.45□□□□□ -0.74
CLIP1-204ENST00000501271 TMEM120BA0PK00 339 aa10.45□□□□□ -0.74
CLIP1-204ENST00000501271 MSCO60682 206 aa10.45□□□□□ -0.74
CLIP1-204ENST00000501271 VIMP08670 466 aaKnown RBP10.45□□□□□ -0.74
CLIP1-204ENST00000501271 BRD2P25440 801 aaKnown RBP10.45□□□□□ -0.74
CLIP1-204ENST00000501271 SCTRP47872 440 aa10.45□□□□□ -0.74
CLIP1-204ENST00000501271 MYL6P60660 151 aa10.45□□□□□ -0.74
CLIP1-204ENST00000501271 OGDHQ02218 1023 aa10.45□□□□□ -0.74
CLIP1-204ENST00000501271 NFX1Q12986 1120 aaKnown RBP10.45□□□□□ -0.74
CLIP1-204ENST00000501271 ZNF394Q53GI3 561 aa10.45□□□□□ -0.74
CLIP1-204ENST00000501271 LACTB2Q53H82 288 aaPredicted RBP10.45□□□□□ -0.74
CLIP1-204ENST00000501271 NOL9Q5SY16 702 aaKnown RBP10.45□□□□□ -0.74
CLIP1-204ENST00000501271 ICE2Q659A1 982 aa10.45□□□□□ -0.74
CLIP1-204ENST00000501271 KAZNQ674X7 775 aa10.45□□□□□ -0.74
CLIP1-204ENST00000501271 CYP4X1Q8N118 509 aa10.45□□□□□ -0.74
CLIP1-204ENST00000501271 CCDC89Q8N998 374 aa10.45□□□□□ -0.74
CLIP1-204ENST00000501271 PRPF31Q8WWY3 499 aaKnown RBP10.45□□□□□ -0.74
CLIP1-204ENST00000501271 SLITRK1Q96PX8 696 aa10.45□□□□□ -0.74
CLIP1-204ENST00000501271 IMPG2Q9BZV3 1241 aa10.45□□□□□ -0.74
CLIP1-204ENST00000501271 BTBD7Q9P203 1132 aa10.45□□□□□ -0.74
CLIP1-204ENST00000501271 IP6K2Q9UHH9 426 aa10.45□□□□□ -0.74
CLIP1-204ENST00000501271 SOWAHBA6NEL2 793 aa10.44□□□□□ -0.74
CLIP1-204ENST00000501271 TMEM191CA6NGB0 347 aa10.44□□□□□ -0.74
CLIP1-204ENST00000501271 MAFO75444 373 aaPredicted RBP10.44□□□□□ -0.74
CLIP1-204ENST00000501271 RASSF9O75901 435 aa10.44□□□□□ -0.74
CLIP1-204ENST00000501271 TMEM191BP0C7N4 346 aa10.44□□□□□ -0.74
CLIP1-204ENST00000501271 TCF7P36402 384 aaPredicted RBP10.44□□□□□ -0.74
CLIP1-204ENST00000501271 STAT5BP51692 787 aa10.44□□□□□ -0.74
CLIP1-204ENST00000501271 P3H1Q32P28 736 aa10.44□□□□□ -0.74
CLIP1-204ENST00000501271 TXNRD3NBQ6F5E7 133 aa10.44□□□□□ -0.74
CLIP1-204ENST00000501271 MFSD7Q6UXD7 560 aa10.44□□□□□ -0.74
CLIP1-204ENST00000501271 ZPBP2Q6X784 338 aa10.44□□□□□ -0.74
CLIP1-204ENST00000501271 WDR49Q8IV35 697 aa10.44□□□□□ -0.74
CLIP1-204ENST00000501271 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.44□□□□□ -0.74
CLIP1-204ENST00000501271 C9orf72Q96LT7 481 aa10.44□□□□□ -0.74
CLIP1-204ENST00000501271 MCEEQ96PE7 176 aa10.44□□□□□ -0.74
CLIP1-204ENST00000501271 ELAC2Q9BQ52 826 aaKnown RBP10.44□□□□□ -0.74
CLIP1-204ENST00000501271 FHDC1Q9C0D6 1143 aaPredicted RBP10.44□□□□□ -0.74
CLIP1-204ENST00000501271 MAF1Q9H063 256 aa10.44□□□□□ -0.74
CLIP1-204ENST00000501271 SLC40A1Q9NP59 571 aa10.44□□□□□ -0.74
CLIP1-204ENST00000501271 MLXIPLQ9NP71 852 aa10.44□□□□□ -0.74
CLIP1-204ENST00000501271 DNPEPQ9ULA0 475 aa10.44□□□□□ -0.74
CLIP1-204ENST00000501271 MCM3APO60318 1980 aa10.44□□□□□ -0.74
CLIP1-204ENST00000501271 F8VP50 259 aa10.44□□□□□ -0.74
CLIP1-204ENST00000501271 LIASO43766 372 aa10.44□□□□□ -0.74
CLIP1-204ENST00000501271 KRT1P04264 644 aa10.44□□□□□ -0.74
CLIP1-204ENST00000501271 ATF7P17544 494 aaPredicted RBP10.44□□□□□ -0.74
CLIP1-204ENST00000501271 EDNRBP24530 442 aa10.44□□□□□ -0.74
CLIP1-204ENST00000501271 MPP2Q14168 576 aa10.44□□□□□ -0.74
CLIP1-204ENST00000501271 SH3D19Q5HYK7 790 aa10.44□□□□□ -0.74
CLIP1-204ENST00000501271 HIBCHQ6NVY1 386 aaPredicted RBP10.44□□□□□ -0.74
CLIP1-204ENST00000501271 LBX2Q6XYB7 198 aa10.44□□□□□ -0.74
CLIP1-204ENST00000501271 EEPD1Q7L9B9 569 aa10.44□□□□□ -0.74
CLIP1-204ENST00000501271 GSTA5Q7RTV2 222 aa10.44□□□□□ -0.74
CLIP1-204ENST00000501271 ACSF2Q96CM8 615 aaPredicted RBP10.44□□□□□ -0.74
CLIP1-204ENST00000501271 FAM212AQ96EL1 285 aa10.44□□□□□ -0.74
CLIP1-204ENST00000501271 KDM4CQ9H3R0 1056 aa10.44□□□□□ -0.74
CLIP1-204ENST00000501271 CISHQ9NSE2 258 aa10.44□□□□□ -0.74
CLIP1-204ENST00000501271 NRBP2Q9NSY0 501 aa10.44□□□□□ -0.74
CLIP1-204ENST00000501271 IVNS1ABPQ9Y6Y0 642 aa10.44□□□□□ -0.74
CLIP1-204ENST00000501271 LTBP3Q9NS15 1303 aa10.43□□□□□ -0.74
CLIP1-204ENST00000501271 CCT8L1PA6NM43 557 aa10.43□□□□□ -0.74
CLIP1-204ENST00000501271 ABLIM1O14639 778 aa10.43□□□□□ -0.74
CLIP1-204ENST00000501271 TOM1L1O75674 476 aa10.43□□□□□ -0.74
CLIP1-204ENST00000501271 TCEA3O75764 348 aa10.43□□□□□ -0.74
CLIP1-204ENST00000501271 GH1P01241 217 aa10.43□□□□□ -0.74
CLIP1-204ENST00000501271 ZSCAN5DPP0CG00 497 aa10.43□□□□□ -0.74
CLIP1-204ENST00000501271 MARK3P27448 753 aa10.43□□□□□ -0.74
CLIP1-204ENST00000501271 ITIH4Q14624 930 aa10.43□□□□□ -0.74
CLIP1-204ENST00000501271 LY6KQ17RY6 165 aa10.43□□□□□ -0.74
CLIP1-204ENST00000501271 ZFYVE27Q5T4F4 411 aa10.43□□□□□ -0.74
CLIP1-204ENST00000501271 PPP1R2P3Q6NXS1 205 aa10.43□□□□□ -0.74
CLIP1-204ENST00000501271 DLK2Q6UY11 383 aa10.43□□□□□ -0.74
CLIP1-204ENST00000501271 SCARA5Q6ZMJ2 495 aa10.43□□□□□ -0.74
CLIP1-204ENST00000501271 TRIM50Q86XT4 487 aa10.43□□□□□ -0.74
CLIP1-204ENST00000501271 ANKS4BQ8N8V4 417 aa10.43□□□□□ -0.74
CLIP1-204ENST00000501271 ANKRD42Q8N9B4 389 aa10.43□□□□□ -0.74
CLIP1-204ENST00000501271 TFAP2BQ92481 460 aa10.43□□□□□ -0.74
CLIP1-204ENST00000501271 P3H4Q92791 437 aa10.43□□□□□ -0.74
CLIP1-204ENST00000501271 ACO2Q99798 780 aaKnown RBP10.43□□□□□ -0.74
CLIP1-204ENST00000501271 TCHPQ9BT92 498 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms