RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 BTBD18B2RXH4 712 aa9.97□□□□□ -0.81
CCDC171-209ENST00000498725 DCLK1O15075 740 aa9.97□□□□□ -0.81
CCDC171-209ENST00000498725 REC8O95072 547 aa9.97□□□□□ -0.81
CCDC171-209ENST00000498725 VNN2O95498 520 aa9.97□□□□□ -0.81
CCDC171-209ENST00000498725 GABRR2P28476 465 aa9.97□□□□□ -0.81
CCDC171-209ENST00000498725 RAP1GAPP47736 663 aa9.97□□□□□ -0.81
CCDC171-209ENST00000498725 ALDH1A3P47895 512 aa9.97□□□□□ -0.81
CCDC171-209ENST00000498725 EFNA5P52803 228 aa9.97□□□□□ -0.81
CCDC171-209ENST00000498725 EPHB3P54753 998 aa9.97□□□□□ -0.81
CCDC171-209ENST00000498725 EPHA5P54756 1037 aa9.97□□□□□ -0.81
CCDC171-209ENST00000498725 CYP4F8P98187 520 aa9.97□□□□□ -0.81
CCDC171-209ENST00000498725 CREB5Q02930 508 aa9.97□□□□□ -0.81
CCDC171-209ENST00000498725 ZNF252P-AS1Q0IIN9 211 aa9.97□□□□□ -0.81
CCDC171-209ENST00000498725 FCHO2Q0JRZ9 810 aa9.97□□□□□ -0.81
CCDC171-209ENST00000498725 CCINQ13939 588 aa9.97□□□□□ -0.81
CCDC171-209ENST00000498725 ARHGAP29Q52LW3 1261 aa9.97□□□□□ -0.81
CCDC171-209ENST00000498725 TMC8Q8IU68 726 aa9.97□□□□□ -0.81
CCDC171-209ENST00000498725 TTC9BQ8N6N2 239 aa9.97□□□□□ -0.81
CCDC171-209ENST00000498725 LEMD2Q8NC56 503 aa9.97□□□□□ -0.81
CCDC171-209ENST00000498725 TTC16Q8NEE8 873 aa9.97□□□□□ -0.81
CCDC171-209ENST00000498725 APPL2Q8NEU8 664 aa9.97□□□□□ -0.81
CCDC171-209ENST00000498725 TNFRSF25Q93038 417 aa9.97□□□□□ -0.81
CCDC171-209ENST00000498725 MSANTD3Q96H12 275 aa9.97□□□□□ -0.81
CCDC171-209ENST00000498725 ZBTB45Q96K62 511 aaPredicted RBP9.97□□□□□ -0.81
CCDC171-209ENST00000498725 ACAP3Q96P50 834 aa9.97□□□□□ -0.81
CCDC171-209ENST00000498725 MTMR9Q96QG7 549 aa9.97□□□□□ -0.81
CCDC171-209ENST00000498725 HHIPQ96QV1 700 aa9.97□□□□□ -0.81
CCDC171-209ENST00000498725 ACO2Q99798 780 aaKnown RBP9.97□□□□□ -0.81
CCDC171-209ENST00000498725 TARS2Q9BW92 718 aaKnown RBP9.97□□□□□ -0.81
CCDC171-209ENST00000498725 DNAJC25Q9H1X3 360 aa9.97□□□□□ -0.81
CCDC171-209ENST00000498725 TUBGCP4Q9UGJ1 667 aa9.97□□□□□ -0.81
CCDC171-209ENST00000498725 TNFSF13BQ9Y275 285 aa9.97□□□□□ -0.81
CCDC171-209ENST00000498725 STK36Q9NRP7 1315 aa9.97□□□□□ -0.81
CCDC171-209ENST00000498725 OBSL1O75147 1896 aa9.97□□□□□ -0.81
CCDC171-209ENST00000498725 TSC2P49815 1807 aa9.96□□□□□ -0.81
CCDC171-209ENST00000498725 CTDNEP1O95476 244 aa9.96□□□□□ -0.82
CCDC171-209ENST00000498725 PRAMEF12O95522 483 aa9.96□□□□□ -0.82
CCDC171-209ENST00000498725 U2AF2P26368 475 aaKnown RBP eCLIP9.96□□□□□ -0.82
CCDC171-209ENST00000498725 MLLT6P55198 1093 aaPredicted RBP9.96□□□□□ -0.82
CCDC171-209ENST00000498725 PEX3P56589 373 aa9.96□□□□□ -0.82
CCDC171-209ENST00000498725 YWHAHQ04917 246 aaPredicted RBP9.96□□□□□ -0.82
CCDC171-209ENST00000498725 ITPRIPL2Q3MIP1 535 aa9.96□□□□□ -0.82
CCDC171-209ENST00000498725 ARHGAP15Q53QZ3 475 aa9.96□□□□□ -0.82
CCDC171-209ENST00000498725 PLA2G2CQ5R387 149 aa9.96□□□□□ -0.82
CCDC171-209ENST00000498725 KIAA1211LQ6NV74 962 aa9.96□□□□□ -0.82
CCDC171-209ENST00000498725 C1orf228Q6PIY5 440 aa9.96□□□□□ -0.82
CCDC171-209ENST00000498725 ALKAL1Q6UXT8 129 aa9.96□□□□□ -0.82
CCDC171-209ENST00000498725 GAREM2Q75VX8 874 aa9.96□□□□□ -0.82
CCDC171-209ENST00000498725 NECAB1Q8N987 351 aa9.96□□□□□ -0.82
CCDC171-209ENST00000498725 LOXL4Q96JB6 756 aa9.96□□□□□ -0.82
CCDC171-209ENST00000498725 TMEM209Q96SK2 561 aa9.96□□□□□ -0.82
CCDC171-209ENST00000498725 LRRC3Q9BY71 257 aa9.96□□□□□ -0.82
CCDC171-209ENST00000498725 BHMT2Q9H2M3 363 aa9.96□□□□□ -0.82
CCDC171-209ENST00000498725 VPS45Q9NRW7 570 aa9.96□□□□□ -0.82
CCDC171-209ENST00000498725 GKN1Q9NS71 199 aa9.96□□□□□ -0.82
CCDC171-209ENST00000498725 TPCN1Q9ULQ1 816 aa9.96□□□□□ -0.82
CCDC171-209ENST00000498725 PCDHB8Q9UN66 801 aa9.96□□□□□ -0.82
CCDC171-209ENST00000498725 LAMA1P25391 3075 aa9.96□□□□□ -0.82
CCDC171-209ENST00000498725 ADAMTS9Q9P2N4 1935 aa9.95□□□□□ -0.82
CCDC171-209ENST00000498725 MEFVO15553 781 aaPredicted RBP9.95□□□□□ -0.82
CCDC171-209ENST00000498725 PFKFB2O60825 505 aa9.95□□□□□ -0.82
CCDC171-209ENST00000498725 RNF40O75150 1001 aa9.95□□□□□ -0.82
CCDC171-209ENST00000498725 EGFP01133 1207 aa9.95□□□□□ -0.82
CCDC171-209ENST00000498725 KCNE1P15382 129 aa9.95□□□□□ -0.82
CCDC171-209ENST00000498725 GBP1P32455 592 aa9.95□□□□□ -0.82
CCDC171-209ENST00000498725 RPL9P32969 192 aaKnown RBP9.95□□□□□ -0.82
CCDC171-209ENST00000498725 CCT6AP40227 531 aaKnown RBP9.95□□□□□ -0.82
CCDC171-209ENST00000498725 MATR3P43243 847 aaKnown RBP eCLIP9.95□□□□□ -0.82
CCDC171-209ENST00000498725 GUCY2FP51841 1108 aa9.95□□□□□ -0.82
CCDC171-209ENST00000498725 GUCY1B3Q02153 619 aa9.95□□□□□ -0.82
CCDC171-209ENST00000498725 PLD1Q13393 1074 aa9.95□□□□□ -0.82
CCDC171-209ENST00000498725 ACAP1Q15027 740 aa9.95□□□□□ -0.82
CCDC171-209ENST00000498725 ELF2Q15723 593 aa9.95□□□□□ -0.82
CCDC171-209ENST00000498725 ECM1Q16610 540 aa9.95□□□□□ -0.82
CCDC171-209ENST00000498725 UAP1L1Q3KQV9 507 aa9.95□□□□□ -0.82
CCDC171-209ENST00000498725 PLK5Q496M5 336 aa9.95□□□□□ -0.82
CCDC171-209ENST00000498725 XKR4Q5GH76 650 aa9.95□□□□□ -0.82
CCDC171-209ENST00000498725 SH3PXD2AQ5TCZ1 1133 aa9.95□□□□□ -0.82
CCDC171-209ENST00000498725 TRIM68Q6AZZ1 485 aa9.95□□□□□ -0.82
CCDC171-209ENST00000498725 FSTL4Q6MZW2 842 aa9.95□□□□□ -0.82
CCDC171-209ENST00000498725 DSTYKQ6XUX3 929 aa9.95□□□□□ -0.82
CCDC171-209ENST00000498725 CENPQQ7L2Z9 268 aaPredicted RBP9.95□□□□□ -0.82
CCDC171-209ENST00000498725 DNAJB7Q7Z6W7 309 aaPredicted RBP9.95□□□□□ -0.82
CCDC171-209ENST00000498725 USP37Q86T82 979 aa9.95□□□□□ -0.82
CCDC171-209ENST00000498725 DIS3L2Q8IYB7 885 aaKnown RBP9.95□□□□□ -0.82
CCDC171-209ENST00000498725 ATAD1Q8NBU5 361 aa9.95□□□□□ -0.82
CCDC171-209ENST00000498725 ERMNQ8TAM6 284 aa9.95□□□□□ -0.82
CCDC171-209ENST00000498725 BPIFB1Q8TDL5 484 aa9.95□□□□□ -0.82
CCDC171-209ENST00000498725 WASF1Q92558 559 aa9.95□□□□□ -0.82
CCDC171-209ENST00000498725 KIFAP3Q92845 792 aa9.95□□□□□ -0.82
CCDC171-209ENST00000498725 LPIN3Q9BQK8 851 aa9.95□□□□□ -0.82
CCDC171-209ENST00000498725 MKNK1Q9BUB5 465 aa9.95□□□□□ -0.82
CCDC171-209ENST00000498725 POLR3CQ9BUI4 534 aaPredicted RBP9.95□□□□□ -0.82
CCDC171-209ENST00000498725 MRPL4Q9BYD3 311 aaKnown RBP9.95□□□□□ -0.82
CCDC171-209ENST00000498725 ADAM33Q9BZ11 813 aa9.95□□□□□ -0.82
CCDC171-209ENST00000498725 DUSP15Q9H1R2 295 aaPredicted RBP9.95□□□□□ -0.82
CCDC171-209ENST00000498725 THG1LQ9NWX6 298 aaKnown RBP9.95□□□□□ -0.82
CCDC171-209ENST00000498725 CNTN3Q9P232 1028 aa9.95□□□□□ -0.82
CCDC171-209ENST00000498725 ANKFY1Q9P2R3 1169 aa9.95□□□□□ -0.82
CCDC171-209ENST00000498725 PHLPP2Q6ZVD8 1323 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms