RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 ANAPC5Q9UJX4 755 aa17.38■□□□□ 0.37
COL6A1-206ENST00000498614 DGAT1O75907 488 aa17.37■□□□□ 0.37
COL6A1-206ENST00000498614 GTF2H1P32780 548 aa17.37■□□□□ 0.37
COL6A1-206ENST00000498614 MKRN3Q13064 507 aaKnown RBP17.37■□□□□ 0.37
COL6A1-206ENST00000498614 C2CD6Q53TS8 623 aa17.37■□□□□ 0.37
COL6A1-206ENST00000498614 FAM47EQ6ZV65 393 aa17.37■□□□□ 0.37
COL6A1-206ENST00000498614 PRUNE1Q86TP1 453 aa17.37■□□□□ 0.37
COL6A1-206ENST00000498614 SCYL3Q8IZE3 742 aa17.37■□□□□ 0.37
COL6A1-206ENST00000498614 MCPH1Q8NEM0 835 aa17.37■□□□□ 0.37
COL6A1-206ENST00000498614 KCNV2Q8TDN2 545 aa17.37■□□□□ 0.37
COL6A1-206ENST00000498614 NSUN6Q8TEA1 469 aaKnown RBP17.37■□□□□ 0.37
COL6A1-206ENST00000498614 PDLIM7Q9NR12 457 aa17.37■□□□□ 0.37
COL6A1-206ENST00000498614 CYP26B1Q9NR63 512 aa17.37■□□□□ 0.37
COL6A1-206ENST00000498614 NKIRAS1Q9NYS0 192 aa17.37■□□□□ 0.37
COL6A1-206ENST00000498614 SLC9A2Q9UBY0 812 aa17.37■□□□□ 0.37
COL6A1-206ENST00000498614 LGALS13Q9UHV8 139 aa17.37■□□□□ 0.37
COL6A1-206ENST00000498614 ANAPC7Q9UJX3 599 aa17.37■□□□□ 0.37
COL6A1-206ENST00000498614 R3HDM2Q9Y2K5 976 aaKnown RBP17.37■□□□□ 0.37
COL6A1-206ENST00000498614 DOCK1Q14185 1865 aa17.37■□□□□ 0.37
COL6A1-206ENST00000498614 TCEA3O75764 348 aa17.37■□□□□ 0.37
COL6A1-206ENST00000498614 FDX1P10109 184 aa17.37■□□□□ 0.37
COL6A1-206ENST00000498614 ATF2P15336 505 aa17.37■□□□□ 0.37
COL6A1-206ENST00000498614 ATP2A2P16615 1042 aaKnown RBP17.37■□□□□ 0.37
COL6A1-206ENST00000498614 PTPRAP18433 802 aa17.37■□□□□ 0.37
COL6A1-206ENST00000498614 WNT7BP56706 349 aa17.37■□□□□ 0.37
COL6A1-206ENST00000498614 ACTR2P61160 394 aa17.37■□□□□ 0.37
COL6A1-206ENST00000498614 ATP11AP98196 1134 aa17.37■□□□□ 0.37
COL6A1-206ENST00000498614 VGLL4Q14135 290 aa17.37■□□□□ 0.37
COL6A1-206ENST00000498614 BRDTQ58F21 947 aaPredicted RBP17.37■□□□□ 0.37
COL6A1-206ENST00000498614 ANKRD20A2Q5SQ80 823 aa17.37■□□□□ 0.37
COL6A1-206ENST00000498614 TMEM63BQ5T3F8 832 aa17.37■□□□□ 0.37
COL6A1-206ENST00000498614 ANKRD20A1Q5TYW2 823 aa17.37■□□□□ 0.37
COL6A1-206ENST00000498614 ANKRD20A3Q5VUR7 823 aa17.37■□□□□ 0.37
COL6A1-206ENST00000498614 LLGL2Q6P1M3 1020 aa17.37■□□□□ 0.37
COL6A1-206ENST00000498614 ARHGEF18Q6ZSZ5 1173 aa17.37■□□□□ 0.37
COL6A1-206ENST00000498614 ZNF280CQ8ND82 737 aa17.37■□□□□ 0.37
COL6A1-206ENST00000498614 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.37■□□□□ 0.37
COL6A1-206ENST00000498614 CLMNQ96JQ2 1002 aa17.37■□□□□ 0.37
COL6A1-206ENST00000498614 ETNK1Q9HBU6 452 aa17.37■□□□□ 0.37
COL6A1-206ENST00000498614 C1orf112Q9NSG2 853 aa17.37■□□□□ 0.37
COL6A1-206ENST00000498614 ZNF214Q9UL59 606 aaPredicted RBP17.37■□□□□ 0.37
COL6A1-206ENST00000498614 WDR90Q96KV7 1748 aa17.36■□□□□ 0.37
COL6A1-206ENST00000498614 RLFQ13129 1914 aa17.36■□□□□ 0.37
COL6A1-206ENST00000498614 UNC5CO95185 931 aa17.36■□□□□ 0.37
COL6A1-206ENST00000498614 GARTP22102 1010 aa17.36■□□□□ 0.37
COL6A1-206ENST00000498614 MAPK4P31152 587 aa17.36■□□□□ 0.37
COL6A1-206ENST00000498614 ADCY8P40145 1251 aa17.36■□□□□ 0.37
COL6A1-206ENST00000498614 TMEM132BQ14DG7 1078 aa17.36■□□□□ 0.37
COL6A1-206ENST00000498614 CPA5Q8WXQ8 436 aa17.36■□□□□ 0.37
COL6A1-206ENST00000498614 SPDL1Q96EA4 605 aa17.36■□□□□ 0.37
COL6A1-206ENST00000498614 PICK1Q9NRD5 415 aa17.36■□□□□ 0.37
COL6A1-206ENST00000498614 PHIPQ8WWQ0 1821 aa17.36■□□□□ 0.37
COL6A1-206ENST00000498614 MAFGO15525 162 aa17.36■□□□□ 0.37
COL6A1-206ENST00000498614 LIG4P49917 911 aa17.36■□□□□ 0.37
COL6A1-206ENST00000498614 GCNT1Q02742 428 aa17.36■□□□□ 0.37
COL6A1-206ENST00000498614 SPOPLQ6IQ16 392 aa17.36■□□□□ 0.37
COL6A1-206ENST00000498614 C9orf72Q96LT7 481 aa17.36■□□□□ 0.37
COL6A1-206ENST00000498614 PITPNM3Q9BZ71 974 aa17.36■□□□□ 0.37
COL6A1-206ENST00000498614 DCLK3Q9C098 648 aa17.36■□□□□ 0.37
COL6A1-206ENST00000498614 MYLK2Q9H1R3 596 aa17.36■□□□□ 0.37
COL6A1-206ENST00000498614 ARHGAP28Q9P2N2 729 aa17.36■□□□□ 0.37
COL6A1-206ENST00000498614 DKC1O60832 514 aaKnown RBP eCLIP17.35■□□□□ 0.37
COL6A1-206ENST00000498614 TNNI1P19237 187 aa17.35■□□□□ 0.37
COL6A1-206ENST00000498614 DSG3P32926 999 aa17.35■□□□□ 0.37
COL6A1-206ENST00000498614 SKIV2L2P42285 1042 aaKnown RBP17.35■□□□□ 0.37
COL6A1-206ENST00000498614 ACOT2P49753 483 aa17.35■□□□□ 0.37
COL6A1-206ENST00000498614 CCNHP51946 323 aaPredicted RBP17.35■□□□□ 0.37
COL6A1-206ENST00000498614 WDR4P57081 412 aaKnown RBP17.35■□□□□ 0.37
COL6A1-206ENST00000498614 STRN3Q13033 797 aa17.35■□□□□ 0.37
COL6A1-206ENST00000498614 ABHD15Q6UXT9 468 aa17.35■□□□□ 0.37
COL6A1-206ENST00000498614 TMEM143Q96AN5 459 aa17.35■□□□□ 0.37
COL6A1-206ENST00000498614 FAM118BQ9BPY3 351 aa17.35■□□□□ 0.37
COL6A1-206ENST00000498614 PAIP2Q9BPZ3 127 aaKnown RBP17.35■□□□□ 0.37
COL6A1-206ENST00000498614 TRAIPQ9BWF2 469 aa17.35■□□□□ 0.37
COL6A1-206ENST00000498614 CYP39A1Q9NYL5 469 aa17.35■□□□□ 0.37
COL6A1-206ENST00000498614 NKX1-2Q9UD57 310 aaPredicted RBP17.35■□□□□ 0.37
COL6A1-206ENST00000498614 SMNDC1O75940 238 aaKnown RBP eCLIP17.35■□□□□ 0.37
COL6A1-206ENST00000498614 UNGP13051 313 aaPredicted RBP17.35■□□□□ 0.37
COL6A1-206ENST00000498614 NLRP11P59045 1033 aaKnown RBP17.35■□□□□ 0.37
COL6A1-206ENST00000498614 CCDC15Q0P6D6 951 aa17.35■□□□□ 0.37
COL6A1-206ENST00000498614 ACVR2BQ13705 512 aa17.35■□□□□ 0.37
COL6A1-206ENST00000498614 SYDE1Q6ZW31 735 aaPredicted RBP17.35■□□□□ 0.37
COL6A1-206ENST00000498614 FNBP1Q96RU3 617 aa17.35■□□□□ 0.37
COL6A1-206ENST00000498614 PLVAPQ9BX97 442 aa17.35■□□□□ 0.37
COL6A1-206ENST00000498614 AS3MTQ9HBK9 375 aa17.35■□□□□ 0.37
COL6A1-206ENST00000498614 MROH7Q68CQ1 1323 aa17.34■□□□□ 0.37
COL6A1-206ENST00000498614 CDH16O75309 829 aa17.34■□□□□ 0.37
COL6A1-206ENST00000498614 GAS8O95995 478 aa17.34■□□□□ 0.37
COL6A1-206ENST00000498614 RRM1P23921 792 aa17.34■□□□□ 0.37
COL6A1-206ENST00000498614 SSTR3P32745 418 aaPredicted RBP17.34■□□□□ 0.37
COL6A1-206ENST00000498614 DAB2IPQ5VWQ8 1189 aa17.34■□□□□ 0.37
COL6A1-206ENST00000498614 NAIF1Q69YI7 327 aaPredicted RBP17.34■□□□□ 0.37
COL6A1-206ENST00000498614 C15orf39Q6ZRI6 1047 aa17.34■□□□□ 0.37
COL6A1-206ENST00000498614 MCOLN2Q8IZK6 566 aa17.34■□□□□ 0.37
COL6A1-206ENST00000498614 FBF1Q8TES7 1133 aa17.34■□□□□ 0.37
COL6A1-206ENST00000498614 HEMGNQ9BXL5 484 aa17.34■□□□□ 0.37
COL6A1-206ENST00000498614 ELP3Q9H9T3 547 aa17.34■□□□□ 0.37
COL6A1-206ENST00000498614 MYH9P35579 1960 aaKnown RBP17.34■□□□□ 0.37
COL6A1-206ENST00000498614 PTPRJQ12913 1337 aa17.34■□□□□ 0.37
COL6A1-206ENST00000498614 MYPNQ86TC9 1320 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms