RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 SOAT2O75908 522 aa16.01■□□□□ 0.15
TRAF4-212ENST00000498540 KCNA4P22459 653 aa16.01■□□□□ 0.15
TRAF4-212ENST00000498540 CDC25AP30304 524 aa16.01■□□□□ 0.15
TRAF4-212ENST00000498540 LRPAP1P30533 357 aa16.01■□□□□ 0.15
TRAF4-212ENST00000498540 CNR2P34972 360 aa16.01■□□□□ 0.15
TRAF4-212ENST00000498540 TRAPPC10P48553 1259 aa16.01■□□□□ 0.15
TRAF4-212ENST00000498540 AARSP49588 968 aaKnown RBP eCLIP16.01■□□□□ 0.15
TRAF4-212ENST00000498540 EPHB3P54753 998 aa16.01■□□□□ 0.15
TRAF4-212ENST00000498540 RAD51AP2Q09MP3 1159 aa16.01■□□□□ 0.15
TRAF4-212ENST00000498540 STRN3Q13033 797 aa16.01■□□□□ 0.15
TRAF4-212ENST00000498540 PLD1Q13393 1074 aa16.01■□□□□ 0.15
TRAF4-212ENST00000498540 PON2Q15165 354 aa16.01■□□□□ 0.15
TRAF4-212ENST00000498540 DGKKQ5KSL6 1271 aa16.01■□□□□ 0.15
TRAF4-212ENST00000498540 C1orf228Q6PIY5 440 aa16.01■□□□□ 0.15
TRAF4-212ENST00000498540 GAREM2Q75VX8 874 aa16.01■□□□□ 0.15
TRAF4-212ENST00000498540 CCDC83Q8IWF9 413 aa16.01■□□□□ 0.15
TRAF4-212ENST00000498540 TMEM161BQ8NDZ6 487 aa16.01■□□□□ 0.15
TRAF4-212ENST00000498540 FBXO18Q8NFZ0 1043 aa16.01■□□□□ 0.15
TRAF4-212ENST00000498540 C17orf75Q9HAS0 396 aa16.01■□□□□ 0.15
TRAF4-212ENST00000498540 SLC27A5Q9Y2P5 690 aa16.01■□□□□ 0.15
TRAF4-212ENST00000498540 TTC26A0AVF1 554 aa16■□□□□ 0.15
TRAF4-212ENST00000498540 MTMR11A4FU01 709 aa16■□□□□ 0.15
TRAF4-212ENST00000498540 PRAMEF12O95522 483 aa16■□□□□ 0.15
TRAF4-212ENST00000498540 MAPTP10636 758 aaKnown RBP16■□□□□ 0.15
TRAF4-212ENST00000498540 TOB1P50616 345 aaPredicted RBP16■□□□□ 0.15
TRAF4-212ENST00000498540 GUCY2FP51841 1108 aa16■□□□□ 0.15
TRAF4-212ENST00000498540 MCL1Q07820 350 aa16■□□□□ 0.15
TRAF4-212ENST00000498540 GPR17Q13304 367 aa16■□□□□ 0.15
TRAF4-212ENST00000498540 GNL2Q13823 731 aaKnown RBP16■□□□□ 0.15
TRAF4-212ENST00000498540 CCINQ13939 588 aa16■□□□□ 0.15
TRAF4-212ENST00000498540 IL17AQ16552 155 aa16■□□□□ 0.15
TRAF4-212ENST00000498540 CENPPQ6IPU0 288 aa16■□□□□ 0.15
TRAF4-212ENST00000498540 CEP68Q76N32 757 aa16■□□□□ 0.15
TRAF4-212ENST00000498540 RALGPS2Q86X27 583 aaPredicted RBP16■□□□□ 0.15
TRAF4-212ENST00000498540 ATAD1Q8NBU5 361 aa16■□□□□ 0.15
TRAF4-212ENST00000498540 KIF12Q96FN5 646 aa16■□□□□ 0.15
TRAF4-212ENST00000498540 TMEM209Q96SK2 561 aa16■□□□□ 0.15
TRAF4-212ENST00000498540 NTPCRQ9BSD7 190 aaKnown RBP16■□□□□ 0.15
TRAF4-212ENST00000498540 MMTAG2Q9BU76 263 aaKnown RBP16■□□□□ 0.15
TRAF4-212ENST00000498540 NOL7Q9UMY1 257 aaKnown RBP16■□□□□ 0.15
TRAF4-212ENST00000498540 PCDHB6Q9Y5E3 794 aa16■□□□□ 0.15
TRAF4-212ENST00000498540 STK24Q9Y6E0 443 aa16■□□□□ 0.15
TRAF4-212ENST00000498540 SPAG17Q6Q759 2223 aa16■□□□□ 0.15
TRAF4-212ENST00000498540 CNOT1A5YKK6 2376 aaKnown RBP16■□□□□ 0.15
TRAF4-212ENST00000498540 SDK1Q7Z5N4 2213 aa15.99■□□□□ 0.15
TRAF4-212ENST00000498540 EML5Q05BV3 1969 aa15.99■□□□□ 0.15
TRAF4-212ENST00000498540 OR6C75A6NL08 312 aa15.99■□□□□ 0.15
TRAF4-212ENST00000498540 PPEF2O14830 753 aa15.99■□□□□ 0.15
TRAF4-212ENST00000498540 CLDN3O15551 220 aa15.99■□□□□ 0.15
TRAF4-212ENST00000498540 GUCY2CP25092 1073 aa15.99■□□□□ 0.15
TRAF4-212ENST00000498540 TNFSF9P41273 254 aa15.99■□□□□ 0.15
TRAF4-212ENST00000498540 ALDH1A3P47895 512 aa15.99■□□□□ 0.15
TRAF4-212ENST00000498540 TNK2Q07912 1038 aa15.99■□□□□ 0.15
TRAF4-212ENST00000498540 ZBTB6Q15916 424 aa15.99■□□□□ 0.15
TRAF4-212ENST00000498540 ARHGAP29Q52LW3 1261 aa15.99■□□□□ 0.15
TRAF4-212ENST00000498540 GPR158Q5T848 1215 aa15.99■□□□□ 0.15
TRAF4-212ENST00000498540 KRT79Q5XKE5 535 aa15.99■□□□□ 0.15
TRAF4-212ENST00000498540 DNAJB7Q7Z6W7 309 aaPredicted RBP15.99■□□□□ 0.15
TRAF4-212ENST00000498540 USP37Q86T82 979 aa15.99■□□□□ 0.15
TRAF4-212ENST00000498540 WDR5BQ86VZ2 330 aa15.99■□□□□ 0.15
TRAF4-212ENST00000498540 FAM200AQ8TCP9 573 aa15.99■□□□□ 0.15
TRAF4-212ENST00000498540 SPIRE2Q8WWL2 714 aa15.99■□□□□ 0.15
TRAF4-212ENST00000498540 PSMG2Q969U7 264 aa15.99■□□□□ 0.15
TRAF4-212ENST00000498540 OXCT2Q9BYC2 517 aaPredicted RBP15.99■□□□□ 0.15
TRAF4-212ENST00000498540 RAB34Q9BZG1 259 aa15.99■□□□□ 0.15
TRAF4-212ENST00000498540 ATXN3LQ9H3M9 355 aa15.99■□□□□ 0.15
TRAF4-212ENST00000498540 PLEKHA5Q9HAU0 1116 aa15.99■□□□□ 0.15
TRAF4-212ENST00000498540 CFAP47Q6ZTR5 3102 aa15.99■□□□□ 0.15
TRAF4-212ENST00000498540 DPYSL4O14531 572 aa15.98■□□□□ 0.15
TRAF4-212ENST00000498540 CLTAP09496 248 aa15.98■□□□□ 0.15
TRAF4-212ENST00000498540 PLS3P13797 630 aa15.98■□□□□ 0.15
TRAF4-212ENST00000498540 GABRR2P28476 465 aa15.98■□□□□ 0.15
TRAF4-212ENST00000498540 HOXA6P31267 233 aa15.98■□□□□ 0.15
TRAF4-212ENST00000498540 MATR3P43243 847 aaKnown RBP eCLIP15.98■□□□□ 0.15
TRAF4-212ENST00000498540 CDR1P51861 262 aa15.98■□□□□ 0.15
TRAF4-212ENST00000498540 SF3A2Q15428 464 aaKnown RBP15.98■□□□□ 0.15
TRAF4-212ENST00000498540 CCDC6Q16204 474 aa15.98■□□□□ 0.15
TRAF4-212ENST00000498540 OVOS1Q6IE37 1185 aa15.98■□□□□ 0.15
TRAF4-212ENST00000498540 PKN3Q6P5Z2 889 aa15.98■□□□□ 0.15
TRAF4-212ENST00000498540 ZPBP2Q6X784 338 aa15.98■□□□□ 0.15
TRAF4-212ENST00000498540 DSTYKQ6XUX3 929 aa15.98■□□□□ 0.15
TRAF4-212ENST00000498540 CHAMP1Q96JM3 812 aa15.98■□□□□ 0.15
TRAF4-212ENST00000498540 TIPINQ9BVW5 301 aa15.98■□□□□ 0.15
TRAF4-212ENST00000498540 RXFP3Q9NSD7 469 aa15.98■□□□□ 0.15
TRAF4-212ENST00000498540 UBQLN1Q9UMX0 589 aaKnown RBP15.98■□□□□ 0.15
TRAF4-212ENST00000498540 LACTBL1A8MY62 500 aa15.97■□□□□ 0.15
TRAF4-212ENST00000498540 AXIN1O15169 862 aa15.97■□□□□ 0.15
TRAF4-212ENST00000498540 EXTL3O43909 919 aa15.97■□□□□ 0.15
TRAF4-212ENST00000498540 TYMPP19971 482 aa15.97■□□□□ 0.15
TRAF4-212ENST00000498540 CYP3A5P20815 502 aa15.97■□□□□ 0.15
TRAF4-212ENST00000498540 PXNP49023 591 aaPredicted RBP15.97■□□□□ 0.15
TRAF4-212ENST00000498540 CYP4F8P98187 520 aa15.97■□□□□ 0.15
TRAF4-212ENST00000498540 CACNB1Q02641 598 aaPredicted RBP15.97■□□□□ 0.15
TRAF4-212ENST00000498540 PPP2R3AQ06190 1150 aa15.97■□□□□ 0.15
TRAF4-212ENST00000498540 MYBPC2Q14324 1141 aa15.97■□□□□ 0.15
TRAF4-212ENST00000498540 ZRSR1Q15695 479 aaKnown RBP15.97■□□□□ 0.15
TRAF4-212ENST00000498540 AASDHQ4L235 1098 aaPredicted RBP15.97■□□□□ 0.15
TRAF4-212ENST00000498540 HAUS6Q7Z4H7 955 aa15.97■□□□□ 0.15
TRAF4-212ENST00000498540 OR10T2Q8NGX3 314 aa15.97■□□□□ 0.15
TRAF4-212ENST00000498540 BPIFB1Q8TDL5 484 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms