RNA–Protein interactions for RNA: ENST00000497368.1

UBE3C-208, Transcript of ubiquitin protein ligase E3C, human

TSL 2

Gene UBE3C, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3C-208	ENST00000497368	C12orf76	Q8N812	135 aa	Predicted RBP	6.14	□□□□□ -1.43
UBE3C-208	ENST00000497368	C4orf32	Q8N8J7	132 aa		6.14	□□□□□ -1.43
UBE3C-208	ENST00000497368	RNF169	Q8NCN4	708 aa		6.14	□□□□□ -1.43
UBE3C-208	ENST00000497368	EPS8L3	Q8TE67	593 aa	Known RBP	6.14	□□□□□ -1.43
UBE3C-208	ENST00000497368	LRRC15	Q8TF66	581 aa		6.14	□□□□□ -1.43
UBE3C-208	ENST00000497368	PRPF31	Q8WWY3	499 aa	Known RBP	6.14	□□□□□ -1.43
UBE3C-208	ENST00000497368	IGSF21	Q96ID5	467 aa		6.14	□□□□□ -1.43
UBE3C-208	ENST00000497368	FBXL18	Q96ME1	805 aa		6.14	□□□□□ -1.43
UBE3C-208	ENST00000497368	FAM20A	Q96MK3	541 aa		6.14	□□□□□ -1.43
UBE3C-208	ENST00000497368	EIF2AK1	Q9BQI3	630 aa	Known RBP	6.14	□□□□□ -1.43
UBE3C-208	ENST00000497368	CEP41	Q9BYV8	373 aa		6.14	□□□□□ -1.43
UBE3C-208	ENST00000497368	CLEC4M	Q9H2X3	399 aa	Predicted RBP	6.14	□□□□□ -1.43
UBE3C-208	ENST00000497368	NXF3	Q9H4D5	531 aa	Known RBP	6.14	□□□□□ -1.43
UBE3C-208	ENST00000497368	TLE6	Q9H808	572 aa		6.14	□□□□□ -1.43
UBE3C-208	ENST00000497368	GPRC5C	Q9NQ84	441 aa		6.14	□□□□□ -1.43
UBE3C-208	ENST00000497368	HES2	Q9Y543	173 aa		6.14	□□□□□ -1.43
UBE3C-208	ENST00000497368	MIA3	Q5JRA6	1907 aa		6.14	□□□□□ -1.43
UBE3C-208	ENST00000497368	LOC100289279	A0A1B0GTE1	492 aa		6.13	□□□□□ -1.43
UBE3C-208	ENST00000497368	CCDC194	A0A1B0GVG4	234 aa		6.13	□□□□□ -1.43
UBE3C-208	ENST00000497368	PTGES	O14684	152 aa		6.13	□□□□□ -1.43
UBE3C-208	ENST00000497368	CPLX1	O14810	134 aa		6.13	□□□□□ -1.43
UBE3C-208	ENST00000497368	CCNT1	O60563	726 aa	Known RBP	6.13	□□□□□ -1.43
UBE3C-208	ENST00000497368	ZC3H11A	O75152	810 aa	Known RBP eCLIP	6.13	□□□□□ -1.43
UBE3C-208	ENST00000497368	DLGAP3	O95886	979 aa		6.13	□□□□□ -1.43
UBE3C-208	ENST00000497368	EOMES	O95936	686 aa		6.13	□□□□□ -1.43
UBE3C-208	ENST00000497368	P4HB	P07237	508 aa	Known RBP	6.13	□□□□□ -1.43
UBE3C-208	ENST00000497368	CTSA	P10619	480 aa		6.13	□□□□□ -1.43
UBE3C-208	ENST00000497368	ARF4	P18085	180 aa	Predicted RBP	6.13	□□□□□ -1.43
UBE3C-208	ENST00000497368	NCL	P19338	710 aa	Known RBP	6.13	□□□□□ -1.43
UBE3C-208	ENST00000497368	SP100	P23497	879 aa	Predicted RBP	6.13	□□□□□ -1.43
UBE3C-208	ENST00000497368	KRT2	P35908	639 aa		6.13	□□□□□ -1.43
UBE3C-208	ENST00000497368	TEC	P42680	631 aa		6.13	□□□□□ -1.43
UBE3C-208	ENST00000497368	PREP	P48147	710 aa		6.13	□□□□□ -1.43
UBE3C-208	ENST00000497368	PTEN	P60484	403 aa		6.13	□□□□□ -1.43
UBE3C-208	ENST00000497368	ZXDA	P98168	799 aa		6.13	□□□□□ -1.43
UBE3C-208	ENST00000497368	GUCY1B3	Q02153	619 aa		6.13	□□□□□ -1.43
UBE3C-208	ENST00000497368	PTPN21	Q16825	1174 aa		6.13	□□□□□ -1.43
UBE3C-208	ENST00000497368	NOMO2	Q5JPE7	1267 aa		6.13	□□□□□ -1.43
UBE3C-208	ENST00000497368	CDCA2	Q69YH5	1023 aa	Predicted RBP	6.13	□□□□□ -1.43
UBE3C-208	ENST00000497368	CWF19L1	Q69YN2	538 aa	Known RBP	6.13	□□□□□ -1.43
UBE3C-208	ENST00000497368	CD300LG	Q6UXG3	332 aa		6.13	□□□□□ -1.43
UBE3C-208	ENST00000497368	FAM43B	Q6ZT52	329 aa	Predicted RBP	6.13	□□□□□ -1.43
UBE3C-208	ENST00000497368	TAS1R1	Q7RTX1	841 aa		6.13	□□□□□ -1.43
UBE3C-208	ENST00000497368	COLGALT2	Q8IYK4	626 aa		6.13	□□□□□ -1.43
UBE3C-208	ENST00000497368	MRPL43	Q8N983	215 aa	Known RBP	6.13	□□□□□ -1.43
UBE3C-208	ENST00000497368	EDA	Q92838	391 aa		6.13	□□□□□ -1.43
UBE3C-208	ENST00000497368	TNPO1	Q92973	898 aa	Known RBP	6.13	□□□□□ -1.43
UBE3C-208	ENST00000497368	UTP4	Q969X6	686 aa	Known RBP	6.13	□□□□□ -1.43
UBE3C-208	ENST00000497368	FAM46A	Q96IP4	442 aa	Known RBP	6.13	□□□□□ -1.43
UBE3C-208	ENST00000497368	CPB2	Q96IY4	423 aa		6.13	□□□□□ -1.43
UBE3C-208	ENST00000497368	CDCA3	Q99618	268 aa	Predicted RBP	6.13	□□□□□ -1.43
UBE3C-208	ENST00000497368	PAAF1	Q9BRP4	392 aa		6.13	□□□□□ -1.43
UBE3C-208	ENST00000497368	HERC2P3	Q9BVR0	1158 aa		6.13	□□□□□ -1.43
UBE3C-208	ENST00000497368	PHF7	Q9BWX1	381 aa	Predicted RBP	6.13	□□□□□ -1.43
UBE3C-208	ENST00000497368	GCOM2	Q9BZD3	368 aa	Predicted RBP	6.13	□□□□□ -1.43
UBE3C-208	ENST00000497368	C22orf23	Q9BZE7	217 aa		6.13	□□□□□ -1.43
UBE3C-208	ENST00000497368	CCDC113	Q9H0I3	377 aa		6.13	□□□□□ -1.43
UBE3C-208	ENST00000497368	SLK	Q9H2G2	1235 aa	Predicted RBP	6.13	□□□□□ -1.43
UBE3C-208	ENST00000497368	SOX17	Q9H6I2	414 aa	Predicted RBP	6.13	□□□□□ -1.43
UBE3C-208	ENST00000497368	ABCB6	Q9NP58	842 aa		6.13	□□□□□ -1.43
UBE3C-208	ENST00000497368	ENTPD7	Q9NQZ7	604 aa		6.13	□□□□□ -1.43
UBE3C-208	ENST00000497368	CHST12	Q9NRB3	414 aa		6.13	□□□□□ -1.43
UBE3C-208	ENST00000497368	NRBP2	Q9NSY0	501 aa		6.13	□□□□□ -1.43
UBE3C-208	ENST00000497368	SPG21	Q9NZD8	308 aa		6.13	□□□□□ -1.43
UBE3C-208	ENST00000497368	INPP5F	Q9Y2H2	1132 aa		6.13	□□□□□ -1.43
UBE3C-208	ENST00000497368	IPP	Q9Y573	584 aa		6.13	□□□□□ -1.43
UBE3C-208	ENST00000497368	PCDHB2	Q9Y5E7	798 aa		6.13	□□□□□ -1.43
UBE3C-208	ENST00000497368	PCDHB12	Q9Y5F1	795 aa		6.13	□□□□□ -1.43
UBE3C-208	ENST00000497368	IRAK3	Q9Y616	596 aa		6.13	□□□□□ -1.43
UBE3C-208	ENST00000497368	ZNF292	O60281	2723 aa		6.13	□□□□□ -1.43
UBE3C-208	ENST00000497368	KIAA1549L	Q6ZVL6	1849 aa		6.13	□□□□□ -1.43
UBE3C-208	ENST00000497368	TMEM221	A6NGB7	291 aa		6.12	□□□□□ -1.43
UBE3C-208	ENST00000497368		M0R296	226 aa		6.12	□□□□□ -1.43
UBE3C-208	ENST00000497368	ABLIM1	O14639	778 aa		6.12	□□□□□ -1.43
UBE3C-208	ENST00000497368	CNP	P09543	421 aa	Known RBP	6.12	□□□□□ -1.43
UBE3C-208	ENST00000497368	SFPQ	P23246	707 aa	Known RBP eCLIP	6.12	□□□□□ -1.43
UBE3C-208	ENST00000497368	TMOD1	P28289	359 aa		6.12	□□□□□ -1.43
UBE3C-208	ENST00000497368	PPM1A	P35813	382 aa		6.12	□□□□□ -1.43
UBE3C-208	ENST00000497368	MLH1	P40692	756 aa		6.12	□□□□□ -1.43
UBE3C-208	ENST00000497368	TOB1	P50616	345 aa	Predicted RBP	6.12	□□□□□ -1.43
UBE3C-208	ENST00000497368	SCNN1G	P51170	649 aa		6.12	□□□□□ -1.43
UBE3C-208	ENST00000497368	CLCN4	P51793	760 aa		6.12	□□□□□ -1.43
UBE3C-208	ENST00000497368	POLG	P54098	1239 aa	Predicted RBP	6.12	□□□□□ -1.43
UBE3C-208	ENST00000497368	GRM2	Q14416	872 aa		6.12	□□□□□ -1.43
UBE3C-208	ENST00000497368	SMC1A	Q14683	1233 aa	Known RBP	6.12	□□□□□ -1.43
UBE3C-208	ENST00000497368	IL17A	Q16552	155 aa		6.12	□□□□□ -1.43
UBE3C-208	ENST00000497368	ODR4	Q5SWX8	454 aa		6.12	□□□□□ -1.43
UBE3C-208	ENST00000497368	SPOUT1	Q5T280	376 aa	Known RBP	6.12	□□□□□ -1.43
UBE3C-208	ENST00000497368	DENND4C	Q5VZ89	1909 aa		6.12	□□□□□ -1.43
UBE3C-208	ENST00000497368	EEF1DP3	Q658K8	133 aa		6.12	□□□□□ -1.43
UBE3C-208	ENST00000497368	TWF2	Q6IBS0	349 aa	Known RBP	6.12	□□□□□ -1.43
UBE3C-208	ENST00000497368	KIAA1841	Q6NSI8	718 aa		6.12	□□□□□ -1.43
UBE3C-208	ENST00000497368	CATSPER4	Q7RTX7	472 aa		6.12	□□□□□ -1.43
UBE3C-208	ENST00000497368	KCNK18	Q7Z418	384 aa		6.12	□□□□□ -1.43
UBE3C-208	ENST00000497368	BMP8A	Q7Z5Y6	402 aa		6.12	□□□□□ -1.43
UBE3C-208	ENST00000497368	SRGAP1	Q7Z6B7	1085 aa		6.12	□□□□□ -1.43
UBE3C-208	ENST00000497368	DDX53	Q86TM3	631 aa	Known RBP	6.12	□□□□□ -1.43
UBE3C-208	ENST00000497368	CCDC83	Q8IWF9	413 aa		6.12	□□□□□ -1.43
UBE3C-208	ENST00000497368	DAW1	Q8N136	415 aa		6.12	□□□□□ -1.43
UBE3C-208	ENST00000497368	VPS52	Q8N1B4	723 aa		6.12	□□□□□ -1.43

Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms