RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, humanhuman

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-223ENST00000496024 STX17P56962 302 aa10.58□□□□□ -0.72
CALD1-223ENST00000496024 ROR1Q01973 937 aa10.58□□□□□ -0.72
CALD1-223ENST00000496024 SMAD4Q13485 552 aaKnown RBP10.58□□□□□ -0.72
CALD1-223ENST00000496024 TRPC3Q13507 836 aa10.58□□□□□ -0.72
CALD1-223ENST00000496024 RAB33AQ14088 237 aa10.58□□□□□ -0.72
CALD1-223ENST00000496024 MRPL58Q14197 206 aaKnown RBP10.58□□□□□ -0.72
CALD1-223ENST00000496024 MYBPC2Q14324 1141 aa10.58□□□□□ -0.72
CALD1-223ENST00000496024 EDRF1Q3B7T1 1238 aa10.58□□□□□ -0.72
CALD1-223ENST00000496024 LIN9Q5TKA1 542 aa10.58□□□□□ -0.72
CALD1-223ENST00000496024 WSCD1Q658N2 575 aa10.58□□□□□ -0.72
CALD1-223ENST00000496024 CES5AQ6NT32 575 aa10.58□□□□□ -0.72
CALD1-223ENST00000496024 LILRA6Q6PI73 481 aa10.58□□□□□ -0.72
CALD1-223ENST00000496024 METTL23Q86XA0 190 aa10.58□□□□□ -0.72
CALD1-223ENST00000496024 LRRC52Q8N7C0 313 aa10.58□□□□□ -0.72
CALD1-223ENST00000496024 CXorf38Q8TB03 319 aa10.58□□□□□ -0.72
CALD1-223ENST00000496024 GPT2Q8TD30 523 aa10.58□□□□□ -0.72
CALD1-223ENST00000496024 NELFBQ8WX92 580 aa10.58□□□□□ -0.72
CALD1-223ENST00000496024 ELMO3Q96BJ8 720 aa10.58□□□□□ -0.72
CALD1-223ENST00000496024 HPDLQ96IR7 371 aa10.58□□□□□ -0.72
CALD1-223ENST00000496024 NUP62CLQ9H1M0 184 aa10.58□□□□□ -0.72
CALD1-223ENST00000496024 S1PR5Q9H228 398 aa10.58□□□□□ -0.72
CALD1-223ENST00000496024 MMRN2Q9H8L6 949 aa10.58□□□□□ -0.72
CALD1-223ENST00000496024 SFXN1Q9H9B4 322 aa10.58□□□□□ -0.72
CALD1-223ENST00000496024 CTNND2Q9UQB3 1225 aa10.58□□□□□ -0.72
CALD1-223ENST00000496024 FAM50BQ9Y247 325 aa10.58□□□□□ -0.72
CALD1-223ENST00000496024 SNX9Q9Y5X1 595 aa10.58□□□□□ -0.72
CALD1-223ENST00000496024 C2orf16Q68DN1 1984 aa10.57□□□□□ -0.72
CALD1-223ENST00000496024 VCANP13611 3396 aa10.57□□□□□ -0.72
CALD1-223ENST00000496024 ARHGEF37A1IGU5 675 aa10.57□□□□□ -0.72
CALD1-223ENST00000496024 WDR27A2RRH5 827 aa10.57□□□□□ -0.72
CALD1-223ENST00000496024 TBC1D4O60343 1298 aa10.57□□□□□ -0.72
CALD1-223ENST00000496024 HUS1O60921 280 aa10.57□□□□□ -0.72
CALD1-223ENST00000496024 EPB41P11171 864 aaKnown RBP10.57□□□□□ -0.72
CALD1-223ENST00000496024 TYMPP19971 482 aa10.57□□□□□ -0.72
CALD1-223ENST00000496024 MYL6P60660 151 aa10.57□□□□□ -0.72
CALD1-223ENST00000496024 MYO1EQ12965 1108 aa10.57□□□□□ -0.72
CALD1-223ENST00000496024 NFIL3Q16649 462 aa10.57□□□□□ -0.72
CALD1-223ENST00000496024 PUS10Q3MIT2 529 aaKnown RBP10.57□□□□□ -0.72
CALD1-223ENST00000496024 COBLL1Q53SF7 1204 aa10.57□□□□□ -0.72
CALD1-223ENST00000496024 PPM1LQ5SGD2 360 aa10.57□□□□□ -0.72
CALD1-223ENST00000496024 TDRD10Q5VZ19 366 aaKnown RBP10.57□□□□□ -0.72
CALD1-223ENST00000496024 ELMSAN1Q6PJG2 1045 aa10.57□□□□□ -0.72
CALD1-223ENST00000496024 BORCS6Q96GS4 357 aa10.57□□□□□ -0.72
CALD1-223ENST00000496024 DHTKD1Q96HY7 919 aaPredicted RBP10.57□□□□□ -0.72
CALD1-223ENST00000496024 PGLYRP2Q96PD5 576 aa10.57□□□□□ -0.72
CALD1-223ENST00000496024 TMEM209Q96SK2 561 aa10.57□□□□□ -0.72
CALD1-223ENST00000496024 UHRF1Q96T88 793 aaPredicted RBP10.57□□□□□ -0.72
CALD1-223ENST00000496024 PIDD1Q9HB75 910 aa10.57□□□□□ -0.72
CALD1-223ENST00000496024 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.57□□□□□ -0.72
CALD1-223ENST00000496024 DPP7Q9UHL4 492 aa10.57□□□□□ -0.72
CALD1-223ENST00000496024 BDP1A6H8Y1 2624 aa10.57□□□□□ -0.72
CALD1-223ENST00000496024 TSC2P49815 1807 aa10.56□□□□□ -0.72
CALD1-223ENST00000496024 PRRG1O14668 218 aa10.56□□□□□ -0.72
CALD1-223ENST00000496024 MAPK13O15264 365 aa10.56□□□□□ -0.72
CALD1-223ENST00000496024 OAZ2O95190 189 aa10.56□□□□□ -0.72
CALD1-223ENST00000496024 C4BPAP04003 597 aaKnown RBP10.56□□□□□ -0.72
CALD1-223ENST00000496024 C8AP07357 584 aa10.56□□□□□ -0.72
CALD1-223ENST00000496024 PAX3P23760 479 aa10.56□□□□□ -0.72
CALD1-223ENST00000496024 HOXD11P31277 338 aaPredicted RBP10.56□□□□□ -0.72
CALD1-223ENST00000496024 ELF1P32519 619 aa10.56□□□□□ -0.72
CALD1-223ENST00000496024 SSTR3P32745 418 aaPredicted RBP10.56□□□□□ -0.72
CALD1-223ENST00000496024 PPP1R2P41236 205 aa10.56□□□□□ -0.72
CALD1-223ENST00000496024 GCLMP48507 274 aa10.56□□□□□ -0.72
CALD1-223ENST00000496024 FKBP3Q00688 224 aaKnown RBP10.56□□□□□ -0.72
CALD1-223ENST00000496024 LRRC63Q05C16 580 aa10.56□□□□□ -0.72
CALD1-223ENST00000496024 ITIH3Q06033 890 aa10.56□□□□□ -0.72
CALD1-223ENST00000496024 ADCY1Q08828 1119 aa10.56□□□□□ -0.72
CALD1-223ENST00000496024 CBX2Q14781 532 aaPredicted RBP10.56□□□□□ -0.72
CALD1-223ENST00000496024 SMAD2Q15796 467 aaKnown RBP10.56□□□□□ -0.72
CALD1-223ENST00000496024 ATAT1Q5SQI0 421 aa10.56□□□□□ -0.72
CALD1-223ENST00000496024 C1orf220Q5T0J3 134 aa10.56□□□□□ -0.72
CALD1-223ENST00000496024 TCERG1LQ5VWI1 586 aa10.56□□□□□ -0.72
CALD1-223ENST00000496024 SLC8B1Q6J4K2 584 aa10.56□□□□□ -0.72
CALD1-223ENST00000496024 RNF19BQ6ZMZ0 732 aa10.56□□□□□ -0.72
CALD1-223ENST00000496024 INTS8Q75QN2 995 aaKnown RBP10.56□□□□□ -0.72
CALD1-223ENST00000496024 SV2AQ7L0J3 742 aa10.56□□□□□ -0.72
CALD1-223ENST00000496024 THEM5Q8N1Q8 247 aa10.56□□□□□ -0.72
CALD1-223ENST00000496024 PDCL2Q8N4E4 241 aa10.56□□□□□ -0.72
CALD1-223ENST00000496024 SLC7A14Q8TBB6 771 aa10.56□□□□□ -0.72
CALD1-223ENST00000496024 TMC2Q8TDI7 906 aa10.56□□□□□ -0.72
CALD1-223ENST00000496024 TMEM174Q8WUU8 243 aa10.56□□□□□ -0.72
CALD1-223ENST00000496024 SMG7Q92540 1137 aaKnown RBP10.56□□□□□ -0.72
CALD1-223ENST00000496024 RPGRIP1Q96KN7 1286 aa10.56□□□□□ -0.72
CALD1-223ENST00000496024 RIPOR3Q96MK2 946 aa10.56□□□□□ -0.72
CALD1-223ENST00000496024 MMS19Q96T76 1030 aa10.56□□□□□ -0.72
CALD1-223ENST00000496024 ADAM7Q9H2U9 754 aa10.56□□□□□ -0.72
CALD1-223ENST00000496024 PLEKHA4Q9H4M7 779 aa10.56□□□□□ -0.72
CALD1-223ENST00000496024 CYP4F11Q9HBI6 524 aa10.56□□□□□ -0.72
CALD1-223ENST00000496024 NXF1Q9UBU9 619 aaKnown RBP10.56□□□□□ -0.72
CALD1-223ENST00000496024 FBXW11Q9UKB1 542 aa10.56□□□□□ -0.72
CALD1-223ENST00000496024 DSEQ9UL01 958 aa10.56□□□□□ -0.72
CALD1-223ENST00000496024 L1RE1Q9UN81 338 aa10.56□□□□□ -0.72
CALD1-223ENST00000496024 POLIQ9UNA4 740 aa10.56□□□□□ -0.72
CALD1-223ENST00000496024 OR6C75A6NL08 312 aa10.55□□□□□ -0.72
CALD1-223ENST00000496024 CCL16O15467 120 aa10.55□□□□□ -0.72
CALD1-223ENST00000496024 HCRTO43612 131 aa10.55□□□□□ -0.72
CALD1-223ENST00000496024 ZMYND10O75800 440 aa10.55□□□□□ -0.72
CALD1-223ENST00000496024 ABLIM3O94929 683 aa10.55□□□□□ -0.72
CALD1-223ENST00000496024 SEC24AO95486 1093 aa10.55□□□□□ -0.72
CALD1-223ENST00000496024 VNN1O95497 513 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms