RNA–Protein interactions for RNA: ENST00000495693.1

EPHA4-213, Transcript of EPH receptor A4, humanhuman

TSL 3

Gene EPHA4, Length 588 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-213ENST00000495693 CBX1P83916 185 aa9.23□□□□□ -0.93
EPHA4-213ENST00000495693 PPP3CAQ08209 521 aa9.23□□□□□ -0.93
EPHA4-213ENST00000495693 SMC1AQ14683 1233 aaKnown RBP9.23□□□□□ -0.93
EPHA4-213ENST00000495693 TARBP2Q15633 366 aaKnown RBP9.23□□□□□ -0.93
EPHA4-213ENST00000495693 ARHGAP44Q17R89 818 aa9.23□□□□□ -0.93
EPHA4-213ENST00000495693 TUBB8Q3ZCM7 444 aa9.23□□□□□ -0.93
EPHA4-213ENST00000495693 CELF3Q5SZQ8 465 aaKnown RBP9.23□□□□□ -0.93
EPHA4-213ENST00000495693 NFRKBQ6P4R8 1299 aa9.23□□□□□ -0.93
EPHA4-213ENST00000495693 LINC00114Q6XXX2 140 aa9.23□□□□□ -0.93
EPHA4-213ENST00000495693 RAB44Q7Z6P3 723 aaPredicted RBP9.23□□□□□ -0.93
EPHA4-213ENST00000495693 LRRC57Q8N9N7 239 aa9.23□□□□□ -0.93
EPHA4-213ENST00000495693 NOA1Q8NC60 698 aaKnown RBP9.23□□□□□ -0.93
EPHA4-213ENST00000495693 FAM71BQ8TC56 605 aa9.23□□□□□ -0.93
EPHA4-213ENST00000495693 MAIP1Q8WWC4 291 aa9.23□□□□□ -0.93
EPHA4-213ENST00000495693 GLG1Q92896 1179 aa9.23□□□□□ -0.93
EPHA4-213ENST00000495693 BHMTQ93088 406 aa9.23□□□□□ -0.93
EPHA4-213ENST00000495693 OPTNQ96CV9 577 aa9.23□□□□□ -0.93
EPHA4-213ENST00000495693 RPS6KC1Q96S38 1066 aa9.23□□□□□ -0.93
EPHA4-213ENST00000495693 RUFY1Q96T51 708 aa9.23□□□□□ -0.93
EPHA4-213ENST00000495693 CGRRF1Q99675 332 aa9.23□□□□□ -0.93
EPHA4-213ENST00000495693 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.23□□□□□ -0.93
EPHA4-213ENST00000495693 SYT11Q9BT88 431 aa9.23□□□□□ -0.93
EPHA4-213ENST00000495693 PAGR1Q9BTK6 254 aa9.23□□□□□ -0.93
EPHA4-213ENST00000495693 MSTO1Q9BUK6 570 aa9.23□□□□□ -0.93
EPHA4-213ENST00000495693 FUT8Q9BYC5 575 aa9.23□□□□□ -0.93
EPHA4-213ENST00000495693 NFKBIZQ9BYH8 718 aa9.23□□□□□ -0.93
EPHA4-213ENST00000495693 ISCUQ9H1K1 167 aa9.23□□□□□ -0.93
EPHA4-213ENST00000495693 SLITRK6Q9H5Y7 841 aa9.23□□□□□ -0.93
EPHA4-213ENST00000495693 VTA1Q9NP79 307 aa9.23□□□□□ -0.93
EPHA4-213ENST00000495693 XPNPEP1Q9NQW7 623 aa9.23□□□□□ -0.93
EPHA4-213ENST00000495693 ZNF446Q9NWS9 450 aa9.23□□□□□ -0.93
EPHA4-213ENST00000495693 MKL2Q9ULH7 1088 aa9.23□□□□□ -0.93
EPHA4-213ENST00000495693 IVNS1ABPQ9Y6Y0 642 aa9.23□□□□□ -0.93
EPHA4-213ENST00000495693 COL1A2P08123 1366 aa9.23□□□□□ -0.93
EPHA4-213ENST00000495693 KIAA1217Q5T5P2 1943 aa9.23□□□□□ -0.93
EPHA4-213ENST00000495693 SIP14410 1827 aa9.22□□□□□ -0.93
EPHA4-213ENST00000495693 DNAJC25-GNG10A0A024R161 153 aa9.22□□□□□ -0.93
EPHA4-213ENST00000495693 CCDC66A2RUB6 948 aa9.22□□□□□ -0.93
EPHA4-213ENST00000495693 LRRIQ3A6PVS8 624 aaPredicted RBP9.22□□□□□ -0.93
EPHA4-213ENST00000495693 PIK3R2O00459 728 aa9.22□□□□□ -0.93
EPHA4-213ENST00000495693 KCNK3O14649 394 aa9.22□□□□□ -0.93
EPHA4-213ENST00000495693 CLDN3O15551 220 aa9.22□□□□□ -0.93
EPHA4-213ENST00000495693 TOM1L1O75674 476 aa9.22□□□□□ -0.93
EPHA4-213ENST00000495693 ERLIN2O94905 339 aa9.22□□□□□ -0.93
EPHA4-213ENST00000495693 TNNI1P19237 187 aa9.22□□□□□ -0.93
EPHA4-213ENST00000495693 AMPD1P23109 780 aa9.22□□□□□ -0.93
EPHA4-213ENST00000495693 TMOD1P28289 359 aa9.22□□□□□ -0.93
EPHA4-213ENST00000495693 ADSSP30520 456 aa9.22□□□□□ -0.93
EPHA4-213ENST00000495693 USP8P40818 1118 aa9.22□□□□□ -0.93
EPHA4-213ENST00000495693 MATR3P43243 847 aaKnown RBP eCLIP9.22□□□□□ -0.93
EPHA4-213ENST00000495693 VSNL1P62760 191 aa9.22□□□□□ -0.93
EPHA4-213ENST00000495693 SNRPNP63162 240 aaKnown RBP9.22□□□□□ -0.93
EPHA4-213ENST00000495693 CDC42EP1Q00587 391 aa9.22□□□□□ -0.93
EPHA4-213ENST00000495693 CDR2Q01850 454 aa9.22□□□□□ -0.93
EPHA4-213ENST00000495693 CNTN2Q02246 1040 aa9.22□□□□□ -0.93
EPHA4-213ENST00000495693 SP4Q02446 784 aa9.22□□□□□ -0.93
EPHA4-213ENST00000495693 MAP2K1Q02750 393 aaPredicted RBP9.22□□□□□ -0.93
EPHA4-213ENST00000495693 TNFAIP2Q03169 654 aa9.22□□□□□ -0.93
EPHA4-213ENST00000495693 CUL1Q13616 776 aa9.22□□□□□ -0.93
EPHA4-213ENST00000495693 CASP8Q14790 479 aa9.22□□□□□ -0.93
EPHA4-213ENST00000495693 MAPK6Q16659 721 aa9.22□□□□□ -0.93
EPHA4-213ENST00000495693 ZACNQ401N2 412 aa9.22□□□□□ -0.93
EPHA4-213ENST00000495693 ZNF484Q5JVG2 852 aa9.22□□□□□ -0.93
EPHA4-213ENST00000495693 FAM26DQ5JW98 314 aa9.22□□□□□ -0.93
EPHA4-213ENST00000495693 CDCA2Q69YH5 1023 aaPredicted RBP9.22□□□□□ -0.93
EPHA4-213ENST00000495693 CCNI2Q6ZMN8 369 aaPredicted RBP9.22□□□□□ -0.93
EPHA4-213ENST00000495693 CBWD2Q8IUF1 395 aa9.22□□□□□ -0.93
EPHA4-213ENST00000495693 WDR49Q8IV35 697 aa9.22□□□□□ -0.93
EPHA4-213ENST00000495693 GLYCTKQ8IVS8 523 aa9.22□□□□□ -0.93
EPHA4-213ENST00000495693 RASGEF1CQ8N431 466 aa9.22□□□□□ -0.93
EPHA4-213ENST00000495693 ANKRD13CQ8N6S4 541 aa9.22□□□□□ -0.93
EPHA4-213ENST00000495693 USP38Q8NB14 1042 aa9.22□□□□□ -0.93
EPHA4-213ENST00000495693 GPRC5AQ8NFJ5 357 aa9.22□□□□□ -0.93
EPHA4-213ENST00000495693 LNX1Q8TBB1 728 aaPredicted RBP9.22□□□□□ -0.93
EPHA4-213ENST00000495693 CCDC127Q96BQ5 260 aa9.22□□□□□ -0.93
EPHA4-213ENST00000495693 HES6Q96HZ4 224 aa9.22□□□□□ -0.93
EPHA4-213ENST00000495693 CEP89Q96ST8 783 aa9.22□□□□□ -0.93
EPHA4-213ENST00000495693 PNKPQ96T60 521 aa9.22□□□□□ -0.93
EPHA4-213ENST00000495693 FAM213AQ9BRX8 229 aa9.22□□□□□ -0.93
EPHA4-213ENST00000495693 SYT17Q9BSW7 474 aa9.22□□□□□ -0.93
EPHA4-213ENST00000495693 FAM129AQ9BZQ8 928 aa9.22□□□□□ -0.93
EPHA4-213ENST00000495693 GPR88Q9GZN0 384 aa9.22□□□□□ -0.93
EPHA4-213ENST00000495693 RAB17Q9H0T7 212 aa9.22□□□□□ -0.93
EPHA4-213ENST00000495693 WNT8AQ9H1J5 351 aa9.22□□□□□ -0.93
EPHA4-213ENST00000495693 POLD4Q9HCU8 107 aa9.22□□□□□ -0.93
EPHA4-213ENST00000495693 ABCB6Q9NP58 842 aa9.22□□□□□ -0.93
EPHA4-213ENST00000495693 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.22□□□□□ -0.93
EPHA4-213ENST00000495693 RBAKQ9NYW8 714 aaPredicted RBP9.22□□□□□ -0.93
EPHA4-213ENST00000495693 ERAP1Q9NZ08 941 aa9.22□□□□□ -0.93
EPHA4-213ENST00000495693 RASAL2Q9UJF2 1139 aa9.22□□□□□ -0.93
EPHA4-213ENST00000495693 GTF3C4Q9UKN8 822 aa9.22□□□□□ -0.93
EPHA4-213ENST00000495693 TFR2Q9UP52 801 aa9.22□□□□□ -0.93
EPHA4-213ENST00000495693 PCDHB2Q9Y5E7 798 aa9.22□□□□□ -0.93
EPHA4-213ENST00000495693 LRRC37A2A6NM11 1700 aa9.22□□□□□ -0.93
EPHA4-213ENST00000495693 MYH9P35579 1960 aaKnown RBP9.21□□□□□ -0.93
EPHA4-213ENST00000495693 A0A0B4J269 797 aa9.21□□□□□ -0.94
EPHA4-213ENST00000495693 GSTTP1A0A1W2PQM5 241 aa9.21□□□□□ -0.94
EPHA4-213ENST00000495693 ANKRD63C9JTQ0 380 aa9.21□□□□□ -0.94
EPHA4-213ENST00000495693 FOXN3O00409 490 aaPredicted RBP9.21□□□□□ -0.94
EPHA4-213ENST00000495693 OPA1O60313 960 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms