RNA–Protein interactions for RNA: ENST00000494945.1

PKP4-215, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-215ENST00000494945 SMYD3Q9H7B4 428 aa11.79□□□□□ -0.52
PKP4-215ENST00000494945 RNF19AQ9NV58 838 aa11.79□□□□□ -0.52
PKP4-215ENST00000494945 TRMT1Q9NXH9 659 aaKnown RBP11.79□□□□□ -0.52
PKP4-215ENST00000494945 KANSL3Q9P2N6 904 aa11.79□□□□□ -0.52
PKP4-215ENST00000494945 ADAMTS1Q9UHI8 967 aa11.79□□□□□ -0.52
PKP4-215ENST00000494945 NAGPAQ9UK23 515 aa11.79□□□□□ -0.52
PKP4-215ENST00000494945 NENFQ9UMX5 172 aa11.79□□□□□ -0.52
PKP4-215ENST00000494945 PCDHA13Q9Y5I0 950 aa11.79□□□□□ -0.52
PKP4-215ENST00000494945 KPNA7A9QM74 516 aa11.78□□□□□ -0.52
PKP4-215ENST00000494945 KIF2AO00139 706 aaPredicted RBP11.78□□□□□ -0.52
PKP4-215ENST00000494945 DDX3XO00571 662 aaKnown RBP eCLIP11.78□□□□□ -0.52
PKP4-215ENST00000494945 PPEF2O14830 753 aa11.78□□□□□ -0.52
PKP4-215ENST00000494945 TUBB4AP04350 444 aa11.78□□□□□ -0.52
PKP4-215ENST00000494945 PAEPP09466 180 aa11.78□□□□□ -0.52
PKP4-215ENST00000494945 FAM163BP0C2L3 166 aa11.78□□□□□ -0.52
PKP4-215ENST00000494945 CHRNB2P17787 502 aa11.78□□□□□ -0.52
PKP4-215ENST00000494945 CD58P19256 250 aa11.78□□□□□ -0.52
PKP4-215ENST00000494945 GNA15P30679 374 aa11.78□□□□□ -0.52
PKP4-215ENST00000494945 AFF1P51825 1210 aaKnown RBP11.78□□□□□ -0.52
PKP4-215ENST00000494945 LILRA4P59901 499 aa11.78□□□□□ -0.52
PKP4-215ENST00000494945 CYP27A1Q02318 531 aa11.78□□□□□ -0.52
PKP4-215ENST00000494945 NOMO2Q5JPE7 1267 aa11.78□□□□□ -0.52
PKP4-215ENST00000494945 CLLU1OSQ5K130 101 aa11.78□□□□□ -0.52
PKP4-215ENST00000494945 DPH6Q7L8W6 267 aa11.78□□□□□ -0.52
PKP4-215ENST00000494945 DEFB128Q7Z7B8 93 aa11.78□□□□□ -0.52
PKP4-215ENST00000494945 GLYCTKQ8IVS8 523 aa11.78□□□□□ -0.52
PKP4-215ENST00000494945 RPUSD2Q8IZ73 545 aaKnown RBP11.78□□□□□ -0.52
PKP4-215ENST00000494945 OLIG1Q8TAK6 271 aa11.78□□□□□ -0.52
PKP4-215ENST00000494945 LNX1Q8TBB1 728 aaPredicted RBP11.78□□□□□ -0.52
PKP4-215ENST00000494945 SLC20A1Q8WUM9 679 aa11.78□□□□□ -0.52
PKP4-215ENST00000494945 DDX1Q92499 740 aaKnown RBP11.78□□□□□ -0.52
PKP4-215ENST00000494945 TSGA10Q9BZW7 698 aa11.78□□□□□ -0.52
PKP4-215ENST00000494945 DNAI2Q9GZS0 605 aa11.78□□□□□ -0.52
PKP4-215ENST00000494945 SDCBP2Q9H190 292 aa11.78□□□□□ -0.52
PKP4-215ENST00000494945 GOLGA2P5Q9HBQ8 144 aa11.78□□□□□ -0.52
PKP4-215ENST00000494945 INTUQ9ULD6 942 aa11.78□□□□□ -0.52
PKP4-215ENST00000494945 LRFN2Q9ULH4 789 aa11.78□□□□□ -0.52
PKP4-215ENST00000494945 INPP5FQ9Y2H2 1132 aa11.78□□□□□ -0.52
PKP4-215ENST00000494945 PCDHB7Q9Y5E2 793 aa11.78□□□□□ -0.52
PKP4-215ENST00000494945 SNX9Q9Y5X1 595 aa11.78□□□□□ -0.52
PKP4-215ENST00000494945 COL4A6Q14031 1691 aa11.78□□□□□ -0.52
PKP4-215ENST00000494945 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.77□□□□□ -0.53
PKP4-215ENST00000494945 PODXLO00592 558 aa11.77□□□□□ -0.53
PKP4-215ENST00000494945 PJA2O43164 708 aa11.77□□□□□ -0.53
PKP4-215ENST00000494945 KRT86O43790 486 aa11.77□□□□□ -0.53
PKP4-215ENST00000494945 CILPO75339 1184 aa11.77□□□□□ -0.53
PKP4-215ENST00000494945 TACC1O75410 805 aa11.77□□□□□ -0.53
PKP4-215ENST00000494945 POMCP01189 267 aa11.77□□□□□ -0.53
PKP4-215ENST00000494945 PFKMP08237 780 aa11.77□□□□□ -0.53
PKP4-215ENST00000494945 GZMAP12544 262 aa11.77□□□□□ -0.53
PKP4-215ENST00000494945 RAG1P15918 1043 aa11.77□□□□□ -0.53
PKP4-215ENST00000494945 EN2P19622 333 aaPredicted RBP11.77□□□□□ -0.53
PKP4-215ENST00000494945 IBSPP21815 317 aaPredicted RBP11.77□□□□□ -0.53
PKP4-215ENST00000494945 RAP1GAPP47736 663 aa11.77□□□□□ -0.53
PKP4-215ENST00000494945 CDH8P55286 799 aa11.77□□□□□ -0.53
PKP4-215ENST00000494945 FMO1Q01740 532 aa11.77□□□□□ -0.53
PKP4-215ENST00000494945 KIF5AQ12840 1032 aa11.77□□□□□ -0.53
PKP4-215ENST00000494945 IKBKEQ14164 716 aa11.77□□□□□ -0.53
PKP4-215ENST00000494945 PTPN14Q15678 1187 aa11.77□□□□□ -0.53
PKP4-215ENST00000494945 UPP1Q16831 310 aa11.77□□□□□ -0.53
PKP4-215ENST00000494945 TCTN1Q2MV58 587 aa11.77□□□□□ -0.53
PKP4-215ENST00000494945 ARHGAP29Q52LW3 1261 aa11.77□□□□□ -0.53
PKP4-215ENST00000494945 CCDC122Q5T0U0 273 aa11.77□□□□□ -0.53
PKP4-215ENST00000494945 PPP1R2P3Q6NXS1 205 aa11.77□□□□□ -0.53
PKP4-215ENST00000494945 ALKBH5Q6P6C2 394 aaKnown RBP11.77□□□□□ -0.53
PKP4-215ENST00000494945 TRIM72Q6ZMU5 477 aa11.77□□□□□ -0.53
PKP4-215ENST00000494945 NYAP1Q6ZVC0 841 aa11.77□□□□□ -0.53
PKP4-215ENST00000494945 LIMS2Q7Z4I7 341 aa11.77□□□□□ -0.53
PKP4-215ENST00000494945 NPAS4Q8IUM7 802 aa11.77□□□□□ -0.53
PKP4-215ENST00000494945 CRIPAKQ8N1N5 446 aa11.77□□□□□ -0.53
PKP4-215ENST00000494945 TMEM199Q8N511 208 aa11.77□□□□□ -0.53
PKP4-215ENST00000494945 TOP6BLQ8N6T0 577 aa11.77□□□□□ -0.53
PKP4-215ENST00000494945 MMS19Q96T76 1030 aa11.77□□□□□ -0.53
PKP4-215ENST00000494945 PRDM5Q9NQX1 630 aaPredicted RBP11.77□□□□□ -0.53
PKP4-215ENST00000494945 KIAA1257Q9ULG3 409 aa11.77□□□□□ -0.53
PKP4-215ENST00000494945 BARX2Q9UMQ3 279 aaPredicted RBP11.77□□□□□ -0.53
PKP4-215ENST00000494945 ZNF638Q14966 1978 aaKnown RBP11.77□□□□□ -0.53
PKP4-215ENST00000494945 MYO16Q9Y6X6 1858 aa11.76□□□□□ -0.53
PKP4-215ENST00000494945 ABHD14A-ACY1A0A1B0GW23 586 aa11.76□□□□□ -0.53
PKP4-215ENST00000494945 TRIM43BA6NCK2 446 aa11.76□□□□□ -0.53
PKP4-215ENST00000494945 MED7O43513 233 aa11.76□□□□□ -0.53
PKP4-215ENST00000494945 HUS1O60921 280 aa11.76□□□□□ -0.53
PKP4-215ENST00000494945 EFCAB14O75071 495 aa11.76□□□□□ -0.53
PKP4-215ENST00000494945 H2AFZP0C0S5 128 aa11.76□□□□□ -0.53
PKP4-215ENST00000494945 ARHGAP25P42331 645 aa11.76□□□□□ -0.53
PKP4-215ENST00000494945 CLCNKBP51801 687 aa11.76□□□□□ -0.53
PKP4-215ENST00000494945 RAD23BP54727 409 aa11.76□□□□□ -0.53
PKP4-215ENST00000494945 DSC1Q08554 894 aa11.76□□□□□ -0.53
PKP4-215ENST00000494945 SOWAHAQ2M3V2 549 aa11.76□□□□□ -0.53
PKP4-215ENST00000494945 TAF3Q5VWG9 929 aa11.76□□□□□ -0.53
PKP4-215ENST00000494945 MFSD5Q6N075 450 aa11.76□□□□□ -0.53
PKP4-215ENST00000494945 H2AFVQ71UI9 128 aa11.76□□□□□ -0.53
PKP4-215ENST00000494945 UNC93AQ86WB7 457 aa11.76□□□□□ -0.53
PKP4-215ENST00000494945 ABI1Q8IZP0 508 aa11.76□□□□□ -0.53
PKP4-215ENST00000494945 APPL2Q8NEU8 664 aa11.76□□□□□ -0.53
PKP4-215ENST00000494945 ZNF606Q8WXB4 792 aa11.76□□□□□ -0.53
PKP4-215ENST00000494945 TRIM43Q96BQ3 446 aaPredicted RBP11.76□□□□□ -0.53
PKP4-215ENST00000494945 TMEM176AQ96HP8 235 aa11.76□□□□□ -0.53
PKP4-215ENST00000494945 MRPL9Q9BYD2 267 aaKnown RBP11.76□□□□□ -0.53
PKP4-215ENST00000494945 ACP6Q9NPH0 428 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms