RNA–Protein interactions for RNA: ENST00000494674.1

PRPF4B-209, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-209ENST00000494674 PCDHGC3Q9UN70 934 aa11.32□□□□□ -0.6
PRPF4B-209ENST00000494674 CCDC66A2RUB6 948 aa11.31□□□□□ -0.6
PRPF4B-209ENST00000494674 MYADML2A6NDP7 307 aa11.31□□□□□ -0.6
PRPF4B-209ENST00000494674 TREHO43280 583 aa11.31□□□□□ -0.6
PRPF4B-209ENST00000494674 CLSTN1O94985 981 aa11.31□□□□□ -0.6
PRPF4B-209ENST00000494674 NPTXRO95502 500 aa11.31□□□□□ -0.6
PRPF4B-209ENST00000494674 STAU1O95793 577 aaKnown RBP11.31□□□□□ -0.6
PRPF4B-209ENST00000494674 KRT19P08727 400 aa11.31□□□□□ -0.6
PRPF4B-209ENST00000494674 PYGMP11217 842 aa11.31□□□□□ -0.6
PRPF4B-209ENST00000494674 ECHS1P30084 290 aa11.31□□□□□ -0.6
PRPF4B-209ENST00000494674 RAD23BP54727 409 aa11.31□□□□□ -0.6
PRPF4B-209ENST00000494674 ZNF200P98182 395 aaPredicted RBP11.31□□□□□ -0.6
PRPF4B-209ENST00000494674 GUCY2DQ02846 1103 aa11.31□□□□□ -0.6
PRPF4B-209ENST00000494674 SREBF2Q12772 1141 aa11.31□□□□□ -0.6
PRPF4B-209ENST00000494674 ZNF394Q53GI3 561 aa11.31□□□□□ -0.6
PRPF4B-209ENST00000494674 ZNF667Q5HYK9 610 aa11.31□□□□□ -0.6
PRPF4B-209ENST00000494674 IFT20Q8IY31 132 aa11.31□□□□□ -0.6
PRPF4B-209ENST00000494674 TMEM40Q8WWA1 233 aa11.31□□□□□ -0.6
PRPF4B-209ENST00000494674 CAVIN3Q969G5 261 aa11.31□□□□□ -0.6
PRPF4B-209ENST00000494674 GDAP1L1Q96MZ0 367 aa11.31□□□□□ -0.6
PRPF4B-209ENST00000494674 ACAP3Q96P50 834 aa11.31□□□□□ -0.6
PRPF4B-209ENST00000494674 TWNKQ96RR1 684 aa11.31□□□□□ -0.6
PRPF4B-209ENST00000494674 EIF2AQ9BY44 585 aaKnown RBP11.31□□□□□ -0.6
PRPF4B-209ENST00000494674 GCOM2Q9BZD3 368 aaPredicted RBP11.31□□□□□ -0.6
PRPF4B-209ENST00000494674 EPB41L5Q9HCM4 733 aa11.31□□□□□ -0.6
PRPF4B-209ENST00000494674 PCDH10Q9P2E7 1040 aa11.31□□□□□ -0.6
PRPF4B-209ENST00000494674 NXF1Q9UBU9 619 aaKnown RBP11.31□□□□□ -0.6
PRPF4B-209ENST00000494674 HMGXB4Q9UGU5 601 aa11.31□□□□□ -0.6
PRPF4B-209ENST00000494674 CA12O43570 354 aa11.3□□□□□ -0.6
PRPF4B-209ENST00000494674 SPOPO43791 374 aa11.3□□□□□ -0.6
PRPF4B-209ENST00000494674 PROSCO94903 275 aa11.3□□□□□ -0.6
PRPF4B-209ENST00000494674 MYL3P08590 195 aa11.3□□□□□ -0.6
PRPF4B-209ENST00000494674 CYBAP13498 195 aa11.3□□□□□ -0.6
PRPF4B-209ENST00000494674 POLR2BP30876 1174 aaKnown RBP11.3□□□□□ -0.6
PRPF4B-209ENST00000494674 ATICP31939 592 aa11.3□□□□□ -0.6
PRPF4B-209ENST00000494674 AARSP49588 968 aaKnown RBP eCLIP11.3□□□□□ -0.6
PRPF4B-209ENST00000494674 EPHB4P54760 987 aa11.3□□□□□ -0.6
PRPF4B-209ENST00000494674 CDH8P55286 799 aa11.3□□□□□ -0.6
PRPF4B-209ENST00000494674 PURAQ00577 322 aaKnown RBP11.3□□□□□ -0.6
PRPF4B-209ENST00000494674 CDC42EP1Q00587 391 aa11.3□□□□□ -0.6
PRPF4B-209ENST00000494674 SIX1Q15475 284 aaPredicted RBP11.3□□□□□ -0.6
PRPF4B-209ENST00000494674 FSCN1Q16658 493 aaKnown RBP11.3□□□□□ -0.6
PRPF4B-209ENST00000494674 WDR72Q3MJ13 1102 aa11.3□□□□□ -0.6
PRPF4B-209ENST00000494674 PPP1R2P3Q6NXS1 205 aa11.3□□□□□ -0.6
PRPF4B-209ENST00000494674 SLC27A1Q6PCB7 646 aa11.3□□□□□ -0.6
PRPF4B-209ENST00000494674 EMBQ6PCB8 327 aa11.3□□□□□ -0.6
PRPF4B-209ENST00000494674 NT5DC4Q86YG4 428 aa11.3□□□□□ -0.6
PRPF4B-209ENST00000494674 C1orf131Q8NDD1 294 aaKnown RBP11.3□□□□□ -0.6
PRPF4B-209ENST00000494674 DNAJB3Q8WWF6 145 aa11.3□□□□□ -0.6
PRPF4B-209ENST00000494674 SEC14L1Q92503 715 aa11.3□□□□□ -0.6
PRPF4B-209ENST00000494674 CCDC102AQ96A19 550 aa11.3□□□□□ -0.6
PRPF4B-209ENST00000494674 SNX27Q96L92 541 aa11.3□□□□□ -0.6
PRPF4B-209ENST00000494674 ZMAT2Q96NC0 199 aaKnown RBP11.3□□□□□ -0.6
PRPF4B-209ENST00000494674 ADPGKQ9BRR6 497 aa11.3□□□□□ -0.6
PRPF4B-209ENST00000494674 ARHGAP39Q9C0H5 1083 aa11.3□□□□□ -0.6
PRPF4B-209ENST00000494674 ELOVL4Q9GZR5 314 aa11.3□□□□□ -0.6
PRPF4B-209ENST00000494674 AP5M1Q9H0R1 490 aa11.3□□□□□ -0.6
PRPF4B-209ENST00000494674 AMACRQ9UHK6 382 aa11.3□□□□□ -0.6
PRPF4B-209ENST00000494674 ITGA11Q9UKX5 1188 aa11.3□□□□□ -0.6
PRPF4B-209ENST00000494674 TCRBV7S2A1N4TA0A589 114 aa11.29□□□□□ -0.6
PRPF4B-209ENST00000494674 CILPO75339 1184 aa11.29□□□□□ -0.6
PRPF4B-209ENST00000494674 GJB6O95452 261 aa11.29□□□□□ -0.6
PRPF4B-209ENST00000494674 PAEPP09466 180 aa11.29□□□□□ -0.6
PRPF4B-209ENST00000494674 FAM153BP0C7A2 387 aa11.29□□□□□ -0.6
PRPF4B-209ENST00000494674 EIF4BP23588 611 aaKnown RBP11.29□□□□□ -0.6
PRPF4B-209ENST00000494674 OAS2P29728 719 aaKnown RBP11.29□□□□□ -0.6
PRPF4B-209ENST00000494674 TNNT3P45378 269 aaPredicted RBP11.29□□□□□ -0.6
PRPF4B-209ENST00000494674 YWHAEP62258 255 aaKnown RBP11.29□□□□□ -0.6
PRPF4B-209ENST00000494674 CAP1Q01518 475 aa11.29□□□□□ -0.6
PRPF4B-209ENST00000494674 ZNF252P-AS1Q0IIN9 211 aa11.29□□□□□ -0.6
PRPF4B-209ENST00000494674 SNX17Q15036 470 aa11.29□□□□□ -0.6
PRPF4B-209ENST00000494674 PCBP1Q15365 356 aaKnown RBP eCLIP11.29□□□□□ -0.6
PRPF4B-209ENST00000494674 ZBTB6Q15916 424 aa11.29□□□□□ -0.6
PRPF4B-209ENST00000494674 KCTD19Q17RG1 926 aaPredicted RBP11.29□□□□□ -0.6
PRPF4B-209ENST00000494674 FAM153CQ494X1 144 aa11.29□□□□□ -0.6
PRPF4B-209ENST00000494674 PPP1R15BQ5SWA1 713 aa11.29□□□□□ -0.6
PRPF4B-209ENST00000494674 LIN9Q5TKA1 542 aa11.29□□□□□ -0.6
PRPF4B-209ENST00000494674 DENND1BQ6P3S1 775 aa11.29□□□□□ -0.6
PRPF4B-209ENST00000494674 ALKAL1Q6UXT8 129 aa11.29□□□□□ -0.6
PRPF4B-209ENST00000494674 SND1Q7KZF4 910 aaKnown RBP eCLIP11.29□□□□□ -0.6
PRPF4B-209ENST00000494674 CATSPER4Q7RTX7 472 aa11.29□□□□□ -0.6
PRPF4B-209ENST00000494674 PRELID2Q8N945 189 aa11.29□□□□□ -0.6
PRPF4B-209ENST00000494674 SLC4A11Q8NBS3 891 aa11.29□□□□□ -0.6
PRPF4B-209ENST00000494674 TRIB2Q92519 343 aa11.29□□□□□ -0.6
PRPF4B-209ENST00000494674 DDX27Q96GQ7 796 aaKnown RBP11.29□□□□□ -0.6
PRPF4B-209ENST00000494674 HPDLQ96IR7 371 aa11.29□□□□□ -0.6
PRPF4B-209ENST00000494674 NAP1L3Q99457 506 aaPredicted RBP11.29□□□□□ -0.6
PRPF4B-209ENST00000494674 CYP3A43Q9HB55 503 aa11.29□□□□□ -0.6
PRPF4B-209ENST00000494674 DPP3Q9NY33 737 aa11.29□□□□□ -0.6
PRPF4B-209ENST00000494674 FAM153AQ9UHL3 310 aa11.29□□□□□ -0.6
PRPF4B-209ENST00000494674 CYTH4Q9UIA0 394 aa11.29□□□□□ -0.6
PRPF4B-209ENST00000494674 NFU1Q9UMS0 254 aa11.29□□□□□ -0.6
PRPF4B-209ENST00000494674 GINS2Q9Y248 185 aa11.29□□□□□ -0.6
PRPF4B-209ENST00000494674 O00370 1275 aa11.29□□□□□ -0.6
PRPF4B-209ENST00000494674 TTI1O43156 1089 aa11.29□□□□□ -0.6
PRPF4B-209ENST00000494674 DUSP11O75319 330 aaKnown RBP11.29□□□□□ -0.6
PRPF4B-209ENST00000494674 AKR1A1P14550 325 aa11.29□□□□□ -0.6
PRPF4B-209ENST00000494674 HSPA6P17066 643 aa11.29□□□□□ -0.6
PRPF4B-209ENST00000494674 SLC1A1P43005 524 aa11.29□□□□□ -0.6
PRPF4B-209ENST00000494674 RWDD2BP57060 319 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms