RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 PIK3R5Q8WYR1 880 aa11.96□□□□□ -0.49
APTX-230ENST00000494649 SYAP1Q96A49 352 aaPredicted RBP11.96□□□□□ -0.49
APTX-230ENST00000494649 MKNK1Q9BUB5 465 aa11.96□□□□□ -0.49
APTX-230ENST00000494649 PCDHB8Q9UN66 801 aa11.96□□□□□ -0.49
APTX-230ENST00000494649 L1RE1Q9UN81 338 aa11.96□□□□□ -0.49
APTX-230ENST00000494649 IRAK3Q9Y616 596 aa11.96□□□□□ -0.49
APTX-230ENST00000494649 SYN3O14994 580 aa11.96□□□□□ -0.5
APTX-230ENST00000494649 SLC16A3O15427 465 aaKnown RBP11.96□□□□□ -0.5
APTX-230ENST00000494649 TGM5O43548 720 aa11.96□□□□□ -0.5
APTX-230ENST00000494649 ADH1AP07327 375 aa11.96□□□□□ -0.5
APTX-230ENST00000494649 LTBRP36941 435 aa11.96□□□□□ -0.5
APTX-230ENST00000494649 CLCN4P51793 760 aa11.96□□□□□ -0.5
APTX-230ENST00000494649 CLDN10P78369 228 aa11.96□□□□□ -0.5
APTX-230ENST00000494649 STX1AQ16623 288 aa11.96□□□□□ -0.5
APTX-230ENST00000494649 ZNF699Q32M78 642 aa11.96□□□□□ -0.5
APTX-230ENST00000494649 ZACNQ401N2 412 aa11.96□□□□□ -0.5
APTX-230ENST00000494649 ANKS3Q6ZW76 656 aa11.96□□□□□ -0.5
APTX-230ENST00000494649 FILIP1Q7Z7B0 1213 aa11.96□□□□□ -0.5
APTX-230ENST00000494649 PDCL2Q8N4E4 241 aa11.96□□□□□ -0.5
APTX-230ENST00000494649 HLA-CQ95604 372 aa11.96□□□□□ -0.5
APTX-230ENST00000494649 CNOT6LQ96LI5 555 aaKnown RBP11.96□□□□□ -0.5
APTX-230ENST00000494649 UBE2ZQ9H832 354 aaPredicted RBP11.96□□□□□ -0.5
APTX-230ENST00000494649 SAMSN1Q9NSI8 373 aaKnown RBP11.96□□□□□ -0.5
APTX-230ENST00000494649 DACH1Q9UI36 760 aa11.96□□□□□ -0.5
APTX-230ENST00000494649 FBXL5Q9UKA1 691 aa11.96□□□□□ -0.5
APTX-230ENST00000494649 MAPK13O15264 365 aa11.95□□□□□ -0.5
APTX-230ENST00000494649 HLA-DRAP01903 254 aa11.95□□□□□ -0.5
APTX-230ENST00000494649 CPB1P15086 417 aa11.95□□□□□ -0.5
APTX-230ENST00000494649 PNPLA4P41247 253 aa11.95□□□□□ -0.5
APTX-230ENST00000494649 MXI1P50539 228 aa11.95□□□□□ -0.5
APTX-230ENST00000494649 KCNQ1P51787 676 aa11.95□□□□□ -0.5
APTX-230ENST00000494649 CDH8P55286 799 aa11.95□□□□□ -0.5
APTX-230ENST00000494649 SOWAHAQ2M3V2 549 aa11.95□□□□□ -0.5
APTX-230ENST00000494649 ANO6Q4KMQ2 910 aa11.95□□□□□ -0.5
APTX-230ENST00000494649 LRRC52Q8N7C0 313 aa11.95□□□□□ -0.5
APTX-230ENST00000494649 EFHBQ8N7U6 833 aa11.95□□□□□ -0.5
APTX-230ENST00000494649 APPL2Q8NEU8 664 aa11.95□□□□□ -0.5
APTX-230ENST00000494649 OR10T2Q8NGX3 314 aa11.95□□□□□ -0.5
APTX-230ENST00000494649 SEMA4DQ92854 862 aa11.95□□□□□ -0.5
APTX-230ENST00000494649 SLC35C1Q96A29 364 aa11.95□□□□□ -0.5
APTX-230ENST00000494649 CEP63Q96MT8 703 aa11.95□□□□□ -0.5
APTX-230ENST00000494649 XYLT2Q9H1B5 865 aa11.95□□□□□ -0.5
APTX-230ENST00000494649 MAN1C1Q9NR34 630 aa11.95□□□□□ -0.5
APTX-230ENST00000494649 CLEC1BQ9P126 229 aa11.95□□□□□ -0.5
APTX-230ENST00000494649 MTRRQ9UBK8 725 aa11.95□□□□□ -0.5
APTX-230ENST00000494649 MUC3AQ02505 3323 aa11.95□□□□□ -0.5
APTX-230ENST00000494649 WDR27A2RRH5 827 aa11.95□□□□□ -0.5
APTX-230ENST00000494649 DLL1O00548 723 aa11.95□□□□□ -0.5
APTX-230ENST00000494649 IKBKBO14920 756 aa11.95□□□□□ -0.5
APTX-230ENST00000494649 HUS1O60921 280 aa11.95□□□□□ -0.5
APTX-230ENST00000494649 RFPL2O75678 378 aa11.95□□□□□ -0.5
APTX-230ENST00000494649 GLUD1P00367 558 aa11.95□□□□□ -0.5
APTX-230ENST00000494649 ROR1Q01973 937 aa11.95□□□□□ -0.5
APTX-230ENST00000494649 LRMPQ12912 555 aa11.95□□□□□ -0.5
APTX-230ENST00000494649 ORC1Q13415 861 aa11.95□□□□□ -0.5
APTX-230ENST00000494649 ADAM15Q13444 863 aa11.95□□□□□ -0.5
APTX-230ENST00000494649 ZNF280DQ6N043 979 aa11.95□□□□□ -0.5
APTX-230ENST00000494649 TMC5Q6UXY8 1006 aa11.95□□□□□ -0.5
APTX-230ENST00000494649 PABPC5Q96DU9 382 aaKnown RBP11.95□□□□□ -0.5
APTX-230ENST00000494649 MRPL45Q9BRJ2 306 aaKnown RBP11.95□□□□□ -0.5
APTX-230ENST00000494649 SMYD3Q9H7B4 428 aa11.95□□□□□ -0.5
APTX-230ENST00000494649 RXFP1Q9HBX9 757 aa11.95□□□□□ -0.5
APTX-230ENST00000494649 ANO10Q9NW15 660 aa11.95□□□□□ -0.5
APTX-230ENST00000494649 STK39Q9UEW8 545 aa11.95□□□□□ -0.5
APTX-230ENST00000494649 SSX2IPQ9Y2D8 614 aa11.95□□□□□ -0.5
APTX-230ENST00000494649 NFE2L3Q9Y4A8 694 aa11.95□□□□□ -0.5
APTX-230ENST00000494649 PLXNA3P51805 1871 aa11.94□□□□□ -0.5
APTX-230ENST00000494649 PDGFRBP09619 1106 aa11.94□□□□□ -0.5
APTX-230ENST00000494649 SP100P23497 879 aaPredicted RBP11.94□□□□□ -0.5
APTX-230ENST00000494649 LMO2P25791 158 aa11.94□□□□□ -0.5
APTX-230ENST00000494649 PSMC1P62191 440 aaKnown RBP11.94□□□□□ -0.5
APTX-230ENST00000494649 TNNC1P63316 161 aa11.94□□□□□ -0.5
APTX-230ENST00000494649 CTC1Q2NKJ3 1217 aa11.94□□□□□ -0.5
APTX-230ENST00000494649 KRT39Q6A163 491 aa11.94□□□□□ -0.5
APTX-230ENST00000494649 C15orf39Q6ZRI6 1047 aa11.94□□□□□ -0.5
APTX-230ENST00000494649 FRMD5Q7Z6J6 570 aa11.94□□□□□ -0.5
APTX-230ENST00000494649 OSTM1Q86WC4 334 aa11.94□□□□□ -0.5
APTX-230ENST00000494649 IRF2BP1Q8IU81 584 aa11.94□□□□□ -0.5
APTX-230ENST00000494649 ADGRF2Q8IZF7 708 aa11.94□□□□□ -0.5
APTX-230ENST00000494649 LPIN3Q9BQK8 851 aa11.94□□□□□ -0.5
APTX-230ENST00000494649 RTP3Q9BQQ7 232 aa11.94□□□□□ -0.5
APTX-230ENST00000494649 TMEM8AQ9HCN3 771 aa11.94□□□□□ -0.5
APTX-230ENST00000494649 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.94□□□□□ -0.5
APTX-230ENST00000494649 DDX43Q9NXZ2 648 aaKnown RBP11.94□□□□□ -0.5
APTX-230ENST00000494649 ERCC5P28715 1186 aaPredicted RBP11.93□□□□□ -0.5
APTX-230ENST00000494649 KCNC3Q14003 757 aa11.93□□□□□ -0.5
APTX-230ENST00000494649 MRPL58Q14197 206 aaKnown RBP11.93□□□□□ -0.5
APTX-230ENST00000494649 ZSCAN23Q3MJ62 389 aa11.93□□□□□ -0.5
APTX-230ENST00000494649 RARS2Q5T160 578 aaKnown RBP11.93□□□□□ -0.5
APTX-230ENST00000494649 RNF19BQ6ZMZ0 732 aa11.93□□□□□ -0.5
APTX-230ENST00000494649 METTL23Q86XA0 190 aa11.93□□□□□ -0.5
APTX-230ENST00000494649 SLC22A17Q8WUG5 538 aa11.93□□□□□ -0.5
APTX-230ENST00000494649 APOBEC3GQ9HC16 384 aaKnown RBP11.93□□□□□ -0.5
APTX-230ENST00000494649 METTL14Q9HCE5 456 aaKnown RBP11.93□□□□□ -0.5
APTX-230ENST00000494649 FNIP2Q9P278 1114 aa11.93□□□□□ -0.5
APTX-230ENST00000494649 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.93□□□□□ -0.5
APTX-230ENST00000494649 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.93□□□□□ -0.5
APTX-230ENST00000494649 TSC2P49815 1807 aa11.93□□□□□ -0.5
APTX-230ENST00000494649 H7C4K7 107 aa11.93□□□□□ -0.5
APTX-230ENST00000494649 PES1O00541 588 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms