RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 A0A1W2PRU2 124 aa18.88■□□□□ 0.61
COL9A1-210ENST00000493682 OGTO15294 1046 aa18.88■□□□□ 0.61
COL9A1-210ENST00000493682 XPOTO43592 962 aaKnown RBP18.88■□□□□ 0.61
COL9A1-210ENST00000493682 CCNE1P24864 410 aa18.88■□□□□ 0.61
COL9A1-210ENST00000493682 OVOS1Q6IE37 1185 aa18.88■□□□□ 0.61
COL9A1-210ENST00000493682 CENPPQ6IPU0 288 aa18.88■□□□□ 0.61
COL9A1-210ENST00000493682 E2F7Q96AV8 911 aa18.88■□□□□ 0.61
COL9A1-210ENST00000493682 REEP2Q9BRK0 252 aa18.88■□□□□ 0.61
COL9A1-210ENST00000493682 RPF1Q9H9Y2 349 aaKnown RBP18.88■□□□□ 0.61
COL9A1-210ENST00000493682 ODF2LQ9ULJ1 636 aa18.88■□□□□ 0.61
COL9A1-210ENST00000493682 SLC27A5Q9Y2P5 690 aa18.88■□□□□ 0.61
COL9A1-210ENST00000493682 CEP250Q9BV73 2442 aa18.88■□□□□ 0.61
COL9A1-210ENST00000493682 A0A0B4J269 797 aa18.87■□□□□ 0.61
COL9A1-210ENST00000493682 PPEF2O14830 753 aa18.87■□□□□ 0.61
COL9A1-210ENST00000493682 HNRNPDLO14979 420 aaKnown RBP18.87■□□□□ 0.61
COL9A1-210ENST00000493682 PIGRP01833 764 aa18.87■□□□□ 0.61
COL9A1-210ENST00000493682 ADRB2P07550 413 aa18.87■□□□□ 0.61
COL9A1-210ENST00000493682 CHRNB1P11230 501 aa18.87■□□□□ 0.61
COL9A1-210ENST00000493682 TYMPP19971 482 aa18.87■□□□□ 0.61
COL9A1-210ENST00000493682 ALDH1A3P47895 512 aa18.87■□□□□ 0.61
COL9A1-210ENST00000493682 NRLP54845 237 aa18.87■□□□□ 0.61
COL9A1-210ENST00000493682 MLLT6P55198 1093 aaPredicted RBP18.87■□□□□ 0.61
COL9A1-210ENST00000493682 LILRA4P59901 499 aa18.87■□□□□ 0.61
COL9A1-210ENST00000493682 MYBPC2Q14324 1141 aa18.87■□□□□ 0.61
COL9A1-210ENST00000493682 SPATA1Q5VX52 437 aa18.87■□□□□ 0.61
COL9A1-210ENST00000493682 ATAD1Q8NBU5 361 aa18.87■□□□□ 0.61
COL9A1-210ENST00000493682 LRRC15Q8TF66 581 aa18.87■□□□□ 0.61
COL9A1-210ENST00000493682 TSPAN18Q96SJ8 248 aa18.87■□□□□ 0.61
COL9A1-210ENST00000493682 F5P12259 2224 aa18.86■□□□□ 0.61
COL9A1-210ENST00000493682 MTMR11A4FU01 709 aa18.86■□□□□ 0.61
COL9A1-210ENST00000493682 SCP2P22307 547 aa18.86■□□□□ 0.61
COL9A1-210ENST00000493682 TGM1P22735 817 aa18.86■□□□□ 0.61
COL9A1-210ENST00000493682 CCR3P51677 355 aa18.86■□□□□ 0.61
COL9A1-210ENST00000493682 GAS6Q14393 721 aa18.86■□□□□ 0.61
COL9A1-210ENST00000493682 PPP2R5DQ14738 602 aa18.86■□□□□ 0.61
COL9A1-210ENST00000493682 STXBP5Q5T5C0 1151 aa18.86■□□□□ 0.61
COL9A1-210ENST00000493682 JADE1Q6IE81 842 aa18.86■□□□□ 0.61
COL9A1-210ENST00000493682 DNAJB7Q7Z6W7 309 aaPredicted RBP18.86■□□□□ 0.61
COL9A1-210ENST00000493682 GPBP1Q86WP2 473 aa18.86■□□□□ 0.61
COL9A1-210ENST00000493682 GPIHBP1Q8IV16 184 aa18.86■□□□□ 0.61
COL9A1-210ENST00000493682 YAF2Q8IY57 180 aa18.86■□□□□ 0.61
COL9A1-210ENST00000493682 MYCT1Q8N699 235 aa18.86■□□□□ 0.61
COL9A1-210ENST00000493682 TTC9BQ8N6N2 239 aa18.86■□□□□ 0.61
COL9A1-210ENST00000493682 CSGALNACT1Q8TDX6 532 aa18.86■□□□□ 0.61
COL9A1-210ENST00000493682 FAM212AQ96EL1 285 aa18.86■□□□□ 0.61
COL9A1-210ENST00000493682 AK8Q96MA6 479 aa18.86■□□□□ 0.61
COL9A1-210ENST00000493682 TMEM209Q96SK2 561 aa18.86■□□□□ 0.61
COL9A1-210ENST00000493682 H3BQV1 296 aa18.85■□□□□ 0.61
COL9A1-210ENST00000493682 K7ENM7 598 aa18.85■□□□□ 0.61
COL9A1-210ENST00000493682 CHADO15335 359 aa18.85■□□□□ 0.61
COL9A1-210ENST00000493682 SLC26A4O43511 780 aa18.85■□□□□ 0.61
COL9A1-210ENST00000493682 SOAT2O75908 522 aa18.85■□□□□ 0.61
COL9A1-210ENST00000493682 FAM13AO94988 1023 aa18.85■□□□□ 0.61
COL9A1-210ENST00000493682 ODC1P11926 461 aa18.85■□□□□ 0.61
COL9A1-210ENST00000493682 SDHBP21912 280 aa18.85■□□□□ 0.61
COL9A1-210ENST00000493682 ZNF131P52739 623 aa18.85■□□□□ 0.61
COL9A1-210ENST00000493682 FCHO2Q0JRZ9 810 aa18.85■□□□□ 0.61
COL9A1-210ENST00000493682 DHX8Q14562 1220 aaKnown RBP18.85■□□□□ 0.61
COL9A1-210ENST00000493682 RABEP1Q15276 862 aa18.85■□□□□ 0.61
COL9A1-210ENST00000493682 C8orf34Q49A92 452 aa18.85■□□□□ 0.61
COL9A1-210ENST00000493682 ARMCX5Q6P1M9 558 aa18.85■□□□□ 0.61
COL9A1-210ENST00000493682 SLC39A4Q6P5W5 647 aa18.85■□□□□ 0.61
COL9A1-210ENST00000493682 GAREM2Q75VX8 874 aa18.85■□□□□ 0.61
COL9A1-210ENST00000493682 ARID3BQ8IVW6 561 aaPredicted RBP18.85■□□□□ 0.61
COL9A1-210ENST00000493682 PSMG2Q969U7 264 aa18.85■□□□□ 0.61
COL9A1-210ENST00000493682 SENP8Q96LD8 212 aa18.85■□□□□ 0.61
COL9A1-210ENST00000493682 MKNK1Q9BUB5 465 aa18.85■□□□□ 0.61
COL9A1-210ENST00000493682 MSTO1Q9BUK6 570 aa18.85■□□□□ 0.61
COL9A1-210ENST00000493682 PARVGQ9HBI0 331 aa18.85■□□□□ 0.61
COL9A1-210ENST00000493682 BLOC1S4Q9NUP1 217 aa18.85■□□□□ 0.61
COL9A1-210ENST00000493682 CPSF3Q9UKF6 684 aaKnown RBP18.85■□□□□ 0.61
COL9A1-210ENST00000493682 ASB3Q9Y575 518 aa18.85■□□□□ 0.61
COL9A1-210ENST00000493682 SLC38A8A6NNN8 435 aa18.84■□□□□ 0.61
COL9A1-210ENST00000493682 NFICP08651 508 aa18.84■□□□□ 0.61
COL9A1-210ENST00000493682 GJB2P29033 226 aa18.84■□□□□ 0.61
COL9A1-210ENST00000493682 UBA7P41226 1012 aa18.84■□□□□ 0.61
COL9A1-210ENST00000493682 CXCL12P48061 93 aa18.84■□□□□ 0.61
COL9A1-210ENST00000493682 SOX9P48436 509 aa18.84■□□□□ 0.61
COL9A1-210ENST00000493682 KPNA1P52294 538 aaPredicted RBP18.84■□□□□ 0.61
COL9A1-210ENST00000493682 SATB1Q01826 763 aa18.84■□□□□ 0.61
COL9A1-210ENST00000493682 LMNB2Q03252 620 aa18.84■□□□□ 0.61
COL9A1-210ENST00000493682 C9orf57Q5W0N0 161 aa18.84■□□□□ 0.61
COL9A1-210ENST00000493682 C1orf228Q6PIY5 440 aa18.84■□□□□ 0.61
COL9A1-210ENST00000493682 CD302Q8IX05 232 aa18.84■□□□□ 0.61
COL9A1-210ENST00000493682 CELF5Q8N6W0 485 aaKnown RBP18.84■□□□□ 0.61
COL9A1-210ENST00000493682 OR10T2Q8NGX3 314 aa18.84■□□□□ 0.61
COL9A1-210ENST00000493682 CALML4Q96GE6 196 aa18.84■□□□□ 0.61
COL9A1-210ENST00000493682 MSANTD3Q96H12 275 aa18.84■□□□□ 0.61
COL9A1-210ENST00000493682 TMX3Q96JJ7 454 aa18.84■□□□□ 0.61
COL9A1-210ENST00000493682 LRRC3BQ96PB8 259 aa18.84■□□□□ 0.61
COL9A1-210ENST00000493682 PARD6AQ9NPB6 346 aa18.84■□□□□ 0.61
COL9A1-210ENST00000493682 GMEB2Q9UKD1 530 aa18.84■□□□□ 0.61
COL9A1-210ENST00000493682 USP18Q9UMW8 372 aa18.84■□□□□ 0.61
COL9A1-210ENST00000493682 PRR5-ARHGAP8B1AHC4 643 aa18.83■□□□□ 0.6
COL9A1-210ENST00000493682 PIRO00625 290 aa18.83■□□□□ 0.6
COL9A1-210ENST00000493682 TRAK2O60296 914 aa18.83■□□□□ 0.6
COL9A1-210ENST00000493682 FGF19O95750 216 aa18.83■□□□□ 0.6
COL9A1-210ENST00000493682 PAX3P23760 479 aa18.83■□□□□ 0.6
COL9A1-210ENST00000493682 ATXN1P54253 815 aaKnown RBP18.83■□□□□ 0.6
COL9A1-210ENST00000493682 ARHGAP8P85298 464 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms