RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 SOD2P04179 222 aa12.38□□□□□ -0.43
LSM2-214ENST00000493387 ITGB1P05556 798 aa12.38□□□□□ -0.43
LSM2-214ENST00000493387 TRIM21P19474 475 aaKnown RBP12.38□□□□□ -0.43
LSM2-214ENST00000493387 SLC9A1P19634 815 aa12.38□□□□□ -0.43
LSM2-214ENST00000493387 FGFR3P22607 806 aa12.38□□□□□ -0.43
LSM2-214ENST00000493387 BRCC3P46736 316 aa12.38□□□□□ -0.43
LSM2-214ENST00000493387 LHX1P48742 406 aa12.38□□□□□ -0.43
LSM2-214ENST00000493387 MFAP3P55082 362 aa12.38□□□□□ -0.43
LSM2-214ENST00000493387 GCNT1Q02742 428 aa12.38□□□□□ -0.43
LSM2-214ENST00000493387 KCNMA1Q12791 1236 aa12.38□□□□□ -0.43
LSM2-214ENST00000493387 KIAA1841Q6NSI8 718 aa12.38□□□□□ -0.43
LSM2-214ENST00000493387 ANKS3Q6ZW76 656 aa12.38□□□□□ -0.43
LSM2-214ENST00000493387 LIMS2Q7Z4I7 341 aa12.38□□□□□ -0.43
LSM2-214ENST00000493387 RNF168Q8IYW5 571 aaPredicted RBP12.38□□□□□ -0.43
LSM2-214ENST00000493387 TMEM130Q8N3G9 435 aa12.38□□□□□ -0.43
LSM2-214ENST00000493387 NEK11Q8NG66 645 aa12.38□□□□□ -0.43
LSM2-214ENST00000493387 HASPINQ8TF76 798 aa12.38□□□□□ -0.43
LSM2-214ENST00000493387 TTPALQ9BTX7 342 aa12.38□□□□□ -0.43
LSM2-214ENST00000493387 BCO2Q9BYV7 579 aa12.38□□□□□ -0.43
LSM2-214ENST00000493387 GPR62Q9BZJ7 368 aa12.38□□□□□ -0.43
LSM2-214ENST00000493387 LMAN2LQ9H0V9 348 aa12.38□□□□□ -0.43
LSM2-214ENST00000493387 APOBEC3GQ9HC16 384 aaKnown RBP12.38□□□□□ -0.43
LSM2-214ENST00000493387 FBXL5Q9UKA1 691 aa12.38□□□□□ -0.43
LSM2-214ENST00000493387 SCN1AP35498 2009 aa12.37□□□□□ -0.43
LSM2-214ENST00000493387 F8W810 466 aa12.37□□□□□ -0.43
LSM2-214ENST00000493387 ARHGEF15O94989 841 aa12.37□□□□□ -0.43
LSM2-214ENST00000493387 URODP06132 367 aa12.37□□□□□ -0.43
LSM2-214ENST00000493387 WARSP23381 471 aaKnown RBP12.37□□□□□ -0.43
LSM2-214ENST00000493387 CREMQ03060 361 aa12.37□□□□□ -0.43
LSM2-214ENST00000493387 LRMPQ12912 555 aa12.37□□□□□ -0.43
LSM2-214ENST00000493387 GPM6BQ13491 265 aa12.37□□□□□ -0.43
LSM2-214ENST00000493387 CUL2Q13617 745 aa12.37□□□□□ -0.43
LSM2-214ENST00000493387 SOWAHAQ2M3V2 549 aa12.37□□□□□ -0.43
LSM2-214ENST00000493387 KLHDC7AQ5VTJ3 777 aa12.37□□□□□ -0.43
LSM2-214ENST00000493387 SCARA3Q6AZY7 606 aa12.37□□□□□ -0.43
LSM2-214ENST00000493387 SPOPLQ6IQ16 392 aa12.37□□□□□ -0.43
LSM2-214ENST00000493387 TMEM173Q86WV6 379 aaPredicted RBP12.37□□□□□ -0.43
LSM2-214ENST00000493387 FMNL3Q8IVF7 1028 aa12.37□□□□□ -0.43
LSM2-214ENST00000493387 ADGRF2Q8IZF7 708 aa12.37□□□□□ -0.43
LSM2-214ENST00000493387 VPS52Q8N1B4 723 aa12.37□□□□□ -0.43
LSM2-214ENST00000493387 THEM5Q8N1Q8 247 aa12.37□□□□□ -0.43
LSM2-214ENST00000493387 PPM1KQ8N3J5 372 aa12.37□□□□□ -0.43
LSM2-214ENST00000493387 PDCL2Q8N4E4 241 aa12.37□□□□□ -0.43
LSM2-214ENST00000493387 SPPL3Q8TCT6 385 aa12.37□□□□□ -0.43
LSM2-214ENST00000493387 BCL7CQ8WUZ0 217 aaPredicted RBP12.37□□□□□ -0.43
LSM2-214ENST00000493387 TATDN2Q93075 761 aa12.37□□□□□ -0.43
LSM2-214ENST00000493387 MRFAP1L1Q96HT8 127 aa12.37□□□□□ -0.43
LSM2-214ENST00000493387 EDEM3Q9BZQ6 932 aa12.37□□□□□ -0.43
LSM2-214ENST00000493387 SNX25Q9H3E2 840 aa12.37□□□□□ -0.43
LSM2-214ENST00000493387 GRPEL1Q9HAV7 217 aa12.37□□□□□ -0.43
LSM2-214ENST00000493387 UBE2TQ9NPD8 197 aaPredicted RBP12.37□□□□□ -0.43
LSM2-214ENST00000493387 NGRNQ9NPE2 291 aaKnown RBP12.37□□□□□ -0.43
LSM2-214ENST00000493387 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.37□□□□□ -0.43
LSM2-214ENST00000493387 CHST7Q9NS84 486 aa12.37□□□□□ -0.43
LSM2-214ENST00000493387 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.37□□□□□ -0.43
LSM2-214ENST00000493387 ITIH6Q6UXX5 1313 aa12.37□□□□□ -0.43
LSM2-214ENST00000493387 I3L4J1 428 aa12.36□□□□□ -0.43
LSM2-214ENST00000493387 LPXNO60711 386 aa12.36□□□□□ -0.43
LSM2-214ENST00000493387 OAZ2O95190 189 aa12.36□□□□□ -0.43
LSM2-214ENST00000493387 CTSAP10619 480 aa12.36□□□□□ -0.43
LSM2-214ENST00000493387 UCHL3P15374 230 aa12.36□□□□□ -0.43
LSM2-214ENST00000493387 PCSK1P29120 753 aa12.36□□□□□ -0.43
LSM2-214ENST00000493387 GNL1P36915 607 aaPredicted RBP12.36□□□□□ -0.43
LSM2-214ENST00000493387 PBX1P40424 430 aa12.36□□□□□ -0.43
LSM2-214ENST00000493387 ASPAP45381 313 aa12.36□□□□□ -0.43
LSM2-214ENST00000493387 GLUD2P49448 558 aa12.36□□□□□ -0.43
LSM2-214ENST00000493387 MRE11P49959 708 aa12.36□□□□□ -0.43
LSM2-214ENST00000493387 ZNF75DP51815 510 aa12.36□□□□□ -0.43
LSM2-214ENST00000493387 DSG1Q02413 1049 aa12.36□□□□□ -0.43
LSM2-214ENST00000493387 YWHAHQ04917 246 aaPredicted RBP12.36□□□□□ -0.43
LSM2-214ENST00000493387 TRIM14Q14142 442 aa12.36□□□□□ -0.43
LSM2-214ENST00000493387 GSE1Q14687 1217 aa12.36□□□□□ -0.43
LSM2-214ENST00000493387 PTPROQ16827 1216 aa12.36□□□□□ -0.43
LSM2-214ENST00000493387 FIGNQ5HY92 759 aa12.36□□□□□ -0.43
LSM2-214ENST00000493387 WSCD1Q658N2 575 aa12.36□□□□□ -0.43
LSM2-214ENST00000493387 OVOS1Q6IE37 1185 aa12.36□□□□□ -0.43
LSM2-214ENST00000493387 ZNF280DQ6N043 979 aa12.36□□□□□ -0.43
LSM2-214ENST00000493387 PHLDB3Q6NSJ2 640 aa12.36□□□□□ -0.43
LSM2-214ENST00000493387 UNC93AQ86WB7 457 aa12.36□□□□□ -0.43
LSM2-214ENST00000493387 CEP57Q86XR8 500 aa12.36□□□□□ -0.43
LSM2-214ENST00000493387 ARNTL2Q8WYA1 636 aa12.36□□□□□ -0.43
LSM2-214ENST00000493387 PIK3R5Q8WYR1 880 aa12.36□□□□□ -0.43
LSM2-214ENST00000493387 ZNF576Q9H609 170 aa12.36□□□□□ -0.43
LSM2-214ENST00000493387 SIX2Q9NPC8 291 aa12.36□□□□□ -0.43
LSM2-214ENST00000493387 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.36□□□□□ -0.43
LSM2-214ENST00000493387 MRPL17Q9NRX2 175 aaKnown RBP12.36□□□□□ -0.43
LSM2-214ENST00000493387 FAM207AQ9NSI2 230 aaPredicted RBP12.36□□□□□ -0.43
LSM2-214ENST00000493387 DNAJC12Q9UKB3 198 aa12.36□□□□□ -0.43
LSM2-214ENST00000493387 MTUS1Q9ULD2 1270 aa12.36□□□□□ -0.43
LSM2-214ENST00000493387 L1RE1Q9UN81 338 aa12.36□□□□□ -0.43
LSM2-214ENST00000493387 POLIQ9UNA4 740 aa12.36□□□□□ -0.43
LSM2-214ENST00000493387 BACE2Q9Y5Z0 518 aa12.36□□□□□ -0.43
LSM2-214ENST00000493387 OR6C75A6NL08 312 aa12.35□□□□□ -0.43
LSM2-214ENST00000493387 GABRDO14764 452 aa12.35□□□□□ -0.43
LSM2-214ENST00000493387 ABCB7O75027 752 aa12.35□□□□□ -0.43
LSM2-214ENST00000493387 LRRN2O75325 713 aa12.35□□□□□ -0.43
LSM2-214ENST00000493387 TPM1P09493 284 aa12.35□□□□□ -0.43
LSM2-214ENST00000493387 WEE2P0C1S8 567 aa12.35□□□□□ -0.43
LSM2-214ENST00000493387 IGFBP6P24592 240 aaPredicted RBP12.35□□□□□ -0.43
LSM2-214ENST00000493387 TKTP29401 623 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms