RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 HMBSP08397 361 aa17.07■□□□□ 0.32
BRAT1-206ENST00000493232 EFL1Q7Z2Z2 1120 aaKnown RBP17.07■□□□□ 0.32
BRAT1-206ENST00000493232 NUDT12Q9BQG2 462 aa17.07■□□□□ 0.32
BRAT1-206ENST00000493232 TRIM51Q9BSJ1 452 aa17.07■□□□□ 0.32
BRAT1-206ENST00000493232 FAM129AQ9BZQ8 928 aa17.07■□□□□ 0.32
BRAT1-206ENST00000493232 KCNH7Q9NS40 1196 aa17.07■□□□□ 0.32
BRAT1-206ENST00000493232 ZBTB12Q9Y330 459 aaPredicted RBP17.07■□□□□ 0.32
BRAT1-206ENST00000493232 MDH1P40925 334 aaKnown RBP17.06■□□□□ 0.32
BRAT1-206ENST00000493232 ANTXR2P58335 489 aa17.06■□□□□ 0.32
BRAT1-206ENST00000493232 PKN3Q6P5Z2 889 aa17.06■□□□□ 0.32
BRAT1-206ENST00000493232 SLC7A14Q8TBB6 771 aa17.06■□□□□ 0.32
BRAT1-206ENST00000493232 MYL2P10916 166 aa17.06■□□□□ 0.32
BRAT1-206ENST00000493232 TAF6P49848 677 aa17.06■□□□□ 0.32
BRAT1-206ENST00000493232 GOLGA7BQ2TAP0 167 aa17.06■□□□□ 0.32
BRAT1-206ENST00000493232 AGBL2Q5U5Z8 902 aa17.06■□□□□ 0.32
BRAT1-206ENST00000493232 GPAT2Q6NUI2 795 aa17.06■□□□□ 0.32
BRAT1-206ENST00000493232 RIBC1Q8N443 379 aaPredicted RBP17.06■□□□□ 0.32
BRAT1-206ENST00000493232 ROPN1BQ9BZX4 212 aaPredicted RBP17.06■□□□□ 0.32
BRAT1-206ENST00000493232 ROPN1Q9HAT0 212 aaPredicted RBP17.06■□□□□ 0.32
BRAT1-206ENST00000493232 ZNF263O14978 683 aa17.06■□□□□ 0.32
BRAT1-206ENST00000493232 PTK6Q13882 451 aa17.06■□□□□ 0.32
BRAT1-206ENST00000493232 ZC2HC1CQ53FD0 456 aaPredicted RBP17.06■□□□□ 0.32
BRAT1-206ENST00000493232 PARP9Q8IXQ6 854 aa17.06■□□□□ 0.32
BRAT1-206ENST00000493232 SLITRK1Q96PX8 696 aa17.06■□□□□ 0.32
BRAT1-206ENST00000493232 AGPAT5Q9NUQ2 364 aa17.06■□□□□ 0.32
BRAT1-206ENST00000493232 RAD23BP54727 409 aa17.06■□□□□ 0.32
BRAT1-206ENST00000493232 ALDH18A1P54886 795 aaKnown RBP17.06■□□□□ 0.32
BRAT1-206ENST00000493232 MGAT5BQ3V5L5 792 aa17.06■□□□□ 0.32
BRAT1-206ENST00000493232 PPP4R4Q6NUP7 873 aa17.06■□□□□ 0.32
BRAT1-206ENST00000493232 MRPL1Q9BYD6 325 aaKnown RBP17.06■□□□□ 0.32
BRAT1-206ENST00000493232 FAM49BQ9NUQ9 324 aa17.06■□□□□ 0.32
BRAT1-206ENST00000493232 PSD3Q9NYI0 1048 aa17.06■□□□□ 0.32
BRAT1-206ENST00000493232 GNL1P36915 607 aaPredicted RBP17.06■□□□□ 0.32
BRAT1-206ENST00000493232 HARS2P49590 506 aaKnown RBP17.06■□□□□ 0.32
BRAT1-206ENST00000493232 CCDC15Q0P6D6 951 aa17.06■□□□□ 0.32
BRAT1-206ENST00000493232 SREBF2Q12772 1141 aa17.06■□□□□ 0.32
BRAT1-206ENST00000493232 NAPEPLDQ6IQ20 393 aa17.06■□□□□ 0.32
BRAT1-206ENST00000493232 TASP1Q9H6P5 420 aa17.06■□□□□ 0.32
BRAT1-206ENST00000493232 UBQLN1Q9UMX0 589 aaKnown RBP17.06■□□□□ 0.32
BRAT1-206ENST00000493232 PKP3Q9Y446 797 aa17.06■□□□□ 0.32
BRAT1-206ENST00000493232 FAM47DPA6NHR8 397 aa17.05■□□□□ 0.32
BRAT1-206ENST00000493232 MEFVO15553 781 aaPredicted RBP17.05■□□□□ 0.32
BRAT1-206ENST00000493232 SPDYAQ5MJ70 313 aa17.05■□□□□ 0.32
BRAT1-206ENST00000493232 RABGAP1LQ5R372 815 aa17.05■□□□□ 0.32
BRAT1-206ENST00000493232 SPATA18Q8TC71 538 aa17.05■□□□□ 0.32
BRAT1-206ENST00000493232 PRMT1Q99873 361 aaKnown RBP17.05■□□□□ 0.32
BRAT1-206ENST00000493232 CLCA2Q9UQC9 943 aa17.05■□□□□ 0.32
BRAT1-206ENST00000493232 GOLGA8RI6L899 631 aa17.05■□□□□ 0.32
BRAT1-206ENST00000493232 KDM1AO60341 852 aa17.05■□□□□ 0.32
BRAT1-206ENST00000493232 SNRPAP09012 282 aaKnown RBP17.05■□□□□ 0.32
BRAT1-206ENST00000493232 PPP4CP60510 307 aa17.05■□□□□ 0.32
BRAT1-206ENST00000493232 COBLL1Q53SF7 1204 aa17.05■□□□□ 0.32
BRAT1-206ENST00000493232 JAMLQ86YT9 394 aa17.05■□□□□ 0.32
BRAT1-206ENST00000493232 PCYOX1LQ8NBM8 494 aa17.05■□□□□ 0.32
BRAT1-206ENST00000493232 SHCBP1Q8NEM2 672 aa17.05■□□□□ 0.32
BRAT1-206ENST00000493232 FEZF2Q8TBJ5 459 aa17.05■□□□□ 0.32
BRAT1-206ENST00000493232 HPDLQ96IR7 371 aa17.05■□□□□ 0.32
BRAT1-206ENST00000493232 FAM200BP0CF97 657 aa17.05■□□□□ 0.32
BRAT1-206ENST00000493232 CYP11B2P19099 503 aa17.05■□□□□ 0.32
BRAT1-206ENST00000493232 SLC9A1P19634 815 aa17.05■□□□□ 0.32
BRAT1-206ENST00000493232 HLA-DPA1P20036 260 aa17.05■□□□□ 0.32
BRAT1-206ENST00000493232 COMTP21964 271 aa17.05■□□□□ 0.32
BRAT1-206ENST00000493232 KLHDC7AQ5VTJ3 777 aa17.05■□□□□ 0.32
BRAT1-206ENST00000493232 MS4A14Q96JA4 679 aa17.05■□□□□ 0.32
BRAT1-206ENST00000493232 KCNK16Q96T55 309 aa17.05■□□□□ 0.32
BRAT1-206ENST00000493232 ALG13Q9NP73 1137 aaKnown RBP17.05■□□□□ 0.32
BRAT1-206ENST00000493232 C20orf96Q9NUD7 363 aaPredicted RBP17.05■□□□□ 0.32
BRAT1-206ENST00000493232 FAM32AQ9Y421 112 aaKnown RBP17.05■□□□□ 0.32
BRAT1-206ENST00000493232 SLC2A3P11169 496 aa17.05■□□□□ 0.32
BRAT1-206ENST00000493232 FXR1P51114 621 aaKnown RBP eCLIP17.05■□□□□ 0.32
BRAT1-206ENST00000493232 PTK7Q13308 1070 aa17.05■□□□□ 0.32
BRAT1-206ENST00000493232 DEFB129Q9H1M3 183 aa17.05■□□□□ 0.32
BRAT1-206ENST00000493232 VPS33BQ9H267 617 aa17.05■□□□□ 0.32
BRAT1-206ENST00000493232 AURKCQ9UQB9 309 aa17.05■□□□□ 0.32
BRAT1-206ENST00000493232 VPS9D1Q9Y2B5 631 aa17.05■□□□□ 0.32
BRAT1-206ENST00000493232 ZNF185O15231 689 aa17.04■□□□□ 0.32
BRAT1-206ENST00000493232 PTRHD1Q6GMV3 140 aaKnown RBP17.04■□□□□ 0.32
BRAT1-206ENST00000493232 C16orf89Q6UX73 402 aa17.04■□□□□ 0.32
BRAT1-206ENST00000493232 CD302Q8IX05 232 aa17.04■□□□□ 0.32
BRAT1-206ENST00000493232 SAMD3Q8N6K7 520 aa17.04■□□□□ 0.32
BRAT1-206ENST00000493232 KCNV2Q8TDN2 545 aa17.04■□□□□ 0.32
BRAT1-206ENST00000493232 CMTM5Q96DZ9 223 aa17.04■□□□□ 0.32
BRAT1-206ENST00000493232 SLC4A7Q9Y6M7 1214 aa17.04■□□□□ 0.32
BRAT1-206ENST00000493232 ABCA9Q8IUA7 1624 aa17.04■□□□□ 0.32
BRAT1-206ENST00000493232 KLHL2O95198 593 aa17.04■□□□□ 0.32
BRAT1-206ENST00000493232 GTF2H1P32780 548 aa17.04■□□□□ 0.32
BRAT1-206ENST00000493232 CCZ1BP86790 482 aa17.04■□□□□ 0.32
BRAT1-206ENST00000493232 CCZ1P86791 482 aaPredicted RBP17.04■□□□□ 0.32
BRAT1-206ENST00000493232 GUCY1A3Q02108 690 aa17.04■□□□□ 0.32
BRAT1-206ENST00000493232 C6orf10Q5SRN2 563 aa17.04■□□□□ 0.32
BRAT1-206ENST00000493232 ZNF467Q7Z7K2 595 aaPredicted RBP17.04■□□□□ 0.32
BRAT1-206ENST00000493232 ATG4CQ96DT6 458 aa17.04■□□□□ 0.32
BRAT1-206ENST00000493232 EPN3Q9H201 632 aa17.04■□□□□ 0.32
BRAT1-206ENST00000493232 HNRNPRO43390 633 aaKnown RBP17.04■□□□□ 0.32
BRAT1-206ENST00000493232 OR1G1P47890 313 aa17.04■□□□□ 0.32
BRAT1-206ENST00000493232 ALDH1A3P47895 512 aa17.04■□□□□ 0.32
BRAT1-206ENST00000493232 KIZQ2M2Z5 673 aa17.04■□□□□ 0.32
BRAT1-206ENST00000493232 BOLA3Q53S33 107 aa17.04■□□□□ 0.32
BRAT1-206ENST00000493232 DCAF6Q58WW2 860 aa17.04■□□□□ 0.32
BRAT1-206ENST00000493232 ADCK2Q7Z695 626 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms