RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-219ENST00000492602 FAM83CQ9BQN1 747 aa5.97□□□□□ -1.45
SEC13-219ENST00000492602 KRT23Q9C075 422 aa5.97□□□□□ -1.45
SEC13-219ENST00000492602 SMG9Q9H0W8 520 aaKnown RBP5.97□□□□□ -1.45
SEC13-219ENST00000492602 CSRNP2Q9H175 543 aa5.97□□□□□ -1.45
SEC13-219ENST00000492602 ATXN3LQ9H3M9 355 aa5.97□□□□□ -1.45
SEC13-219ENST00000492602 IL21RQ9HBE5 538 aa5.97□□□□□ -1.45
SEC13-219ENST00000492602 TM7SF3Q9NS93 570 aa5.97□□□□□ -1.45
SEC13-219ENST00000492602 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.97□□□□□ -1.45
SEC13-219ENST00000492602 MAN2B2Q9Y2E5 1009 aa5.97□□□□□ -1.45
SEC13-219ENST00000492602 COL4A3BPQ9Y5P4 624 aa5.97□□□□□ -1.45
SEC13-219ENST00000492602 LRRK2Q5S007 2527 aa5.97□□□□□ -1.45
SEC13-219ENST00000492602 TNRC6BQ9UPQ9 1833 aaKnown RBP5.97□□□□□ -1.45
SEC13-219ENST00000492602 TTC41PQ6P2S7 1318 aa5.97□□□□□ -1.45
SEC13-219ENST00000492602 ZFHX3Q15911 3703 aa5.97□□□□□ -1.45
SEC13-219ENST00000492602 MYH9P35579 1960 aaKnown RBP5.97□□□□□ -1.45
SEC13-219ENST00000492602 BLACEA4D250 179 aa5.96□□□□□ -1.46
SEC13-219ENST00000492602 ANTXRLA6NF34 631 aa5.96□□□□□ -1.46
SEC13-219ENST00000492602 WDR64B1ANS9 1081 aa5.96□□□□□ -1.46
SEC13-219ENST00000492602 FAM86B1E9PN63 330 aa5.96□□□□□ -1.46
SEC13-219ENST00000492602 I3L4J1 428 aa5.96□□□□□ -1.46
SEC13-219ENST00000492602 FLRT2O43155 660 aa5.96□□□□□ -1.46
SEC13-219ENST00000492602 BRINP1O60477 761 aa5.96□□□□□ -1.46
SEC13-219ENST00000492602 TSPAN1O60635 241 aa5.96□□□□□ -1.46
SEC13-219ENST00000492602 B3GAT3O94766 335 aa5.96□□□□□ -1.46
SEC13-219ENST00000492602 THP07101 528 aa5.96□□□□□ -1.46
SEC13-219ENST00000492602 FAM86B2P0C5J1 330 aa5.96□□□□□ -1.46
SEC13-219ENST00000492602 HNRNPLP14866 589 aaKnown RBP eCLIP5.96□□□□□ -1.46
SEC13-219ENST00000492602 ARSAP15289 507 aa5.96□□□□□ -1.46
SEC13-219ENST00000492602 IGFBP6P24592 240 aaPredicted RBP5.96□□□□□ -1.46
SEC13-219ENST00000492602 GJA4P35212 333 aa5.96□□□□□ -1.46
SEC13-219ENST00000492602 ACTN2P35609 894 aa5.96□□□□□ -1.46
SEC13-219ENST00000492602 HNF1BP35680 557 aa5.96□□□□□ -1.46
SEC13-219ENST00000492602 UCNP55089 124 aa5.96□□□□□ -1.46
SEC13-219ENST00000492602 CLDN6P56747 220 aa5.96□□□□□ -1.46
SEC13-219ENST00000492602 RTP5Q14D33 572 aa5.96□□□□□ -1.46
SEC13-219ENST00000492602 KIAA1614Q5VZ46 1190 aa5.96□□□□□ -1.46
SEC13-219ENST00000492602 TMEM92Q6UXU6 159 aa5.96□□□□□ -1.46
SEC13-219ENST00000492602 NIPA1Q7RTP0 329 aa5.96□□□□□ -1.46
SEC13-219ENST00000492602 TRIML1Q8N9V2 468 aa5.96□□□□□ -1.46
SEC13-219ENST00000492602 USP33Q8TEY7 942 aa5.96□□□□□ -1.46
SEC13-219ENST00000492602 HMGB4Q8WW32 186 aa5.96□□□□□ -1.46
SEC13-219ENST00000492602 CCDC51Q96ER9 411 aa5.96□□□□□ -1.46
SEC13-219ENST00000492602 CEP89Q96ST8 783 aa5.96□□□□□ -1.46
SEC13-219ENST00000492602 LPIN3Q9BQK8 851 aa5.96□□□□□ -1.46
SEC13-219ENST00000492602 SPZ1Q9BXG8 430 aa5.96□□□□□ -1.46
SEC13-219ENST00000492602 LRRC3Q9BY71 257 aa5.96□□□□□ -1.46
SEC13-219ENST00000492602 ANO3Q9BYT9 981 aa5.96□□□□□ -1.46
SEC13-219ENST00000492602 ZDHHC5Q9C0B5 715 aa5.96□□□□□ -1.46
SEC13-219ENST00000492602 NRSN2Q9GZP1 204 aa5.96□□□□□ -1.46
SEC13-219ENST00000492602 GAREM1Q9H706 876 aa5.96□□□□□ -1.46
SEC13-219ENST00000492602 SENP2Q9HC62 589 aa5.96□□□□□ -1.46
SEC13-219ENST00000492602 DISC1Q9NRI5 854 aa5.96□□□□□ -1.46
SEC13-219ENST00000492602 MMP17Q9ULZ9 603 aa5.96□□□□□ -1.46
SEC13-219ENST00000492602 USP9YO00507 2555 aaPredicted RBP5.95□□□□□ -1.46
SEC13-219ENST00000492602 FLNCQ14315 2725 aa5.95□□□□□ -1.46
SEC13-219ENST00000492602 hCG_1642624A0A1W2PR95 340 aa5.95□□□□□ -1.46
SEC13-219ENST00000492602 ERICH2A1L162 156 aa5.95□□□□□ -1.46
SEC13-219ENST00000492602 TNFSF14O43557 240 aa5.95□□□□□ -1.46
SEC13-219ENST00000492602 TRAPPC3O43617 180 aa5.95□□□□□ -1.46
SEC13-219ENST00000492602 CHMP2AO43633 222 aa5.95□□□□□ -1.46
SEC13-219ENST00000492602 CILPO75339 1184 aa5.95□□□□□ -1.46
SEC13-219ENST00000492602 NPTXRO95502 500 aa5.95□□□□□ -1.46
SEC13-219ENST00000492602 FOSP01100 380 aaPredicted RBP5.95□□□□□ -1.46
SEC13-219ENST00000492602 GNSP15586 552 aa5.95□□□□□ -1.46
SEC13-219ENST00000492602 MAOBP27338 520 aa5.95□□□□□ -1.46
SEC13-219ENST00000492602 SMARCA1P28370 1054 aa5.95□□□□□ -1.46
SEC13-219ENST00000492602 AXLP30530 894 aa5.95□□□□□ -1.46
SEC13-219ENST00000492602 BRCC3P46736 316 aa5.95□□□□□ -1.46
SEC13-219ENST00000492602 CYP4A11Q02928 519 aa5.95□□□□□ -1.46
SEC13-219ENST00000492602 TARDBPQ13148 414 aaKnown RBP eCLIP5.95□□□□□ -1.46
SEC13-219ENST00000492602 NMIQ13287 307 aaPredicted RBP5.95□□□□□ -1.46
SEC13-219ENST00000492602 PTPRNQ16849 979 aa5.95□□□□□ -1.46
SEC13-219ENST00000492602 ARHGAP15Q53QZ3 475 aa5.95□□□□□ -1.46
SEC13-219ENST00000492602 XKR3Q5GH77 459 aa5.95□□□□□ -1.46
SEC13-219ENST00000492602 TPGS2Q68CL5 300 aa5.95□□□□□ -1.46
SEC13-219ENST00000492602 CC2D1AQ6P1N0 951 aaPredicted RBP5.95□□□□□ -1.46
SEC13-219ENST00000492602 SLC36A4Q6YBV0 504 aa5.95□□□□□ -1.46
SEC13-219ENST00000492602 GAREM2Q75VX8 874 aa5.95□□□□□ -1.46
SEC13-219ENST00000492602 CYB5R4Q7L1T6 521 aa5.95□□□□□ -1.46
SEC13-219ENST00000492602 CATIPQ7Z7H3 387 aa5.95□□□□□ -1.46
SEC13-219ENST00000492602 CDR2LQ86X02 465 aaPredicted RBP5.95□□□□□ -1.46
SEC13-219ENST00000492602 ERICH1Q86X53 443 aa5.95□□□□□ -1.46
SEC13-219ENST00000492602 SLC41A1Q8IVJ1 513 aa5.95□□□□□ -1.46
SEC13-219ENST00000492602 RNF149Q8NC42 400 aa5.95□□□□□ -1.46
SEC13-219ENST00000492602 ZNF248Q8NDW4 579 aa5.95□□□□□ -1.46
SEC13-219ENST00000492602 PRPF31Q8WWY3 499 aaKnown RBP5.95□□□□□ -1.46
SEC13-219ENST00000492602 TSC1Q92574 1164 aa5.95□□□□□ -1.46
SEC13-219ENST00000492602 HSPA12BQ96MM6 686 aa5.95□□□□□ -1.46
SEC13-219ENST00000492602 JPH2Q9BR39 696 aaPredicted RBP5.95□□□□□ -1.46
SEC13-219ENST00000492602 SLC4A5Q9BY07 1137 aa5.95□□□□□ -1.46
SEC13-219ENST00000492602 NIFKQ9BYG3 293 aaKnown RBP5.95□□□□□ -1.46
SEC13-219ENST00000492602 FAM124BQ9H5Z6 455 aaPredicted RBP5.95□□□□□ -1.46
SEC13-219ENST00000492602 CNNM2Q9H8M5 875 aa5.95□□□□□ -1.46
SEC13-219ENST00000492602 LRRC4CQ9HCJ2 640 aa5.95□□□□□ -1.46
SEC13-219ENST00000492602 SUSD2Q9UGT4 822 aa5.95□□□□□ -1.46
SEC13-219ENST00000492602 AFF4Q9UHB7 1163 aaKnown RBP5.95□□□□□ -1.46
SEC13-219ENST00000492602 TBX20Q9UMR3 447 aa5.95□□□□□ -1.46
SEC13-219ENST00000492602 BTBD3Q9Y2F9 522 aa5.95□□□□□ -1.46
SEC13-219ENST00000492602 HELZP42694 1942 aaKnown RBP5.94□□□□□ -1.46
SEC13-219ENST00000492602 IGLV3-22A0A075B6J6 115 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms