RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 TBX20Q9UMR3 447 aa9.92□□□□□ -0.82
HDAC3-212ENST00000492407 SPTBN4Q9H254 2564 aa9.92□□□□□ -0.82
HDAC3-212ENST00000492407 WDR87Q6ZQQ6 2873 aa9.92□□□□□ -0.82
HDAC3-212ENST00000492407 VWA8A3KMH1 1905 aa9.92□□□□□ -0.82
HDAC3-212ENST00000492407 LACTBL1A8MY62 500 aa9.91□□□□□ -0.82
HDAC3-212ENST00000492407 H3BQV1 296 aa9.91□□□□□ -0.82
HDAC3-212ENST00000492407 ZNF263O14978 683 aa9.91□□□□□ -0.82
HDAC3-212ENST00000492407 HNRNPDLO14979 420 aaKnown RBP9.91□□□□□ -0.82
HDAC3-212ENST00000492407 CHADO15335 359 aa9.91□□□□□ -0.82
HDAC3-212ENST00000492407 TRAK2O60296 914 aa9.91□□□□□ -0.82
HDAC3-212ENST00000492407 PAPSS2O95340 614 aaPredicted RBP9.91□□□□□ -0.82
HDAC3-212ENST00000492407 CYP11A1P05108 521 aa9.91□□□□□ -0.82
HDAC3-212ENST00000492407 ODC1P11926 461 aa9.91□□□□□ -0.82
HDAC3-212ENST00000492407 CD72P21854 359 aa9.91□□□□□ -0.82
HDAC3-212ENST00000492407 TUFMP49411 452 aaKnown RBP9.91□□□□□ -0.82
HDAC3-212ENST00000492407 CCR3P51677 355 aa9.91□□□□□ -0.82
HDAC3-212ENST00000492407 LILRA4P59901 499 aa9.91□□□□□ -0.82
HDAC3-212ENST00000492407 GTF2BQ00403 316 aa9.91□□□□□ -0.82
HDAC3-212ENST00000492407 FCHO2Q0JRZ9 810 aa9.91□□□□□ -0.82
HDAC3-212ENST00000492407 ZRSR1Q15695 479 aaKnown RBP9.91□□□□□ -0.82
HDAC3-212ENST00000492407 C8orf34Q49A92 452 aa9.91□□□□□ -0.82
HDAC3-212ENST00000492407 OVOS1Q6IE37 1185 aa9.91□□□□□ -0.82
HDAC3-212ENST00000492407 ARMCX5Q6P1M9 558 aa9.91□□□□□ -0.82
HDAC3-212ENST00000492407 VITQ6UXI7 678 aa9.91□□□□□ -0.82
HDAC3-212ENST00000492407 DSTYKQ6XUX3 929 aa9.91□□□□□ -0.82
HDAC3-212ENST00000492407 DGLUCYQ7Z3D6 616 aa9.91□□□□□ -0.82
HDAC3-212ENST00000492407 BRAPQ7Z569 592 aa9.91□□□□□ -0.82
HDAC3-212ENST00000492407 ITIH5Q86UX2 942 aa9.91□□□□□ -0.82
HDAC3-212ENST00000492407 NT5DC4Q86YG4 428 aa9.91□□□□□ -0.82
HDAC3-212ENST00000492407 SYNPOQ8N3V7 929 aa9.91□□□□□ -0.82
HDAC3-212ENST00000492407 MYCT1Q8N699 235 aa9.91□□□□□ -0.82
HDAC3-212ENST00000492407 ZSCAN18Q8TBC5 510 aaPredicted RBP9.91□□□□□ -0.82
HDAC3-212ENST00000492407 RMDN1Q96DB5 314 aa9.91□□□□□ -0.82
HDAC3-212ENST00000492407 TRIM44Q96DX7 344 aaPredicted RBP9.91□□□□□ -0.82
HDAC3-212ENST00000492407 HINFPQ9BQA5 517 aa9.91□□□□□ -0.82
HDAC3-212ENST00000492407 HAPLN2Q9GZV7 340 aa9.91□□□□□ -0.82
HDAC3-212ENST00000492407 TUBGCP4Q9UGJ1 667 aa9.91□□□□□ -0.82
HDAC3-212ENST00000492407 CPSF3Q9UKF6 684 aaKnown RBP9.91□□□□□ -0.82
HDAC3-212ENST00000492407 PRDM4Q9UKN5 801 aa9.91□□□□□ -0.82
HDAC3-212ENST00000492407 C2CD2Q9Y426 696 aa9.91□□□□□ -0.82
HDAC3-212ENST00000492407 YIPF1Q9Y548 306 aa9.91□□□□□ -0.82
HDAC3-212ENST00000492407 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.91□□□□□ -0.82
HDAC3-212ENST00000492407 STYXL1Q9Y6J8 313 aa9.91□□□□□ -0.82
HDAC3-212ENST00000492407 CACNA1AO00555 2505 aa9.91□□□□□ -0.82
HDAC3-212ENST00000492407 ARNTLO00327 626 aa9.9□□□□□ -0.82
HDAC3-212ENST00000492407 PIRO00625 290 aa9.9□□□□□ -0.82
HDAC3-212ENST00000492407 FOXD2O60548 495 aaPredicted RBP9.9□□□□□ -0.82
HDAC3-212ENST00000492407 LRP3O75074 770 aa9.9□□□□□ -0.82
HDAC3-212ENST00000492407 MYL4P12829 197 aa9.9□□□□□ -0.82
HDAC3-212ENST00000492407 TDGF1P13385 188 aa9.9□□□□□ -0.82
HDAC3-212ENST00000492407 GJB2P29033 226 aa9.9□□□□□ -0.82
HDAC3-212ENST00000492407 GDI1P31150 447 aa9.9□□□□□ -0.82
HDAC3-212ENST00000492407 HOXA6P31267 233 aa9.9□□□□□ -0.82
HDAC3-212ENST00000492407 CNR2P34972 360 aa9.9□□□□□ -0.82
HDAC3-212ENST00000492407 DDIT3P35638 169 aa9.9□□□□□ -0.82
HDAC3-212ENST00000492407 LMNB2Q03252 620 aa9.9□□□□□ -0.82
HDAC3-212ENST00000492407 RAD51AP2Q09MP3 1159 aa9.9□□□□□ -0.82
HDAC3-212ENST00000492407 MTAPQ13126 283 aa9.9□□□□□ -0.82
HDAC3-212ENST00000492407 LRRC32Q14392 662 aa9.9□□□□□ -0.82
HDAC3-212ENST00000492407 ENOX2Q16206 610 aaKnown RBP9.9□□□□□ -0.82
HDAC3-212ENST00000492407 SEZ6Q53EL9 994 aa9.9□□□□□ -0.82
HDAC3-212ENST00000492407 ARHGAP15Q53QZ3 475 aa9.9□□□□□ -0.82
HDAC3-212ENST00000492407 DGKKQ5KSL6 1271 aa9.9□□□□□ -0.82
HDAC3-212ENST00000492407 TMC8Q8IU68 726 aa9.9□□□□□ -0.82
HDAC3-212ENST00000492407 YAF2Q8IY57 180 aa9.9□□□□□ -0.82
HDAC3-212ENST00000492407 HS6ST3Q8IZP7 471 aa9.9□□□□□ -0.82
HDAC3-212ENST00000492407 SPEM1Q8N4L4 309 aa9.9□□□□□ -0.82
HDAC3-212ENST00000492407 SHKBP1Q8TBC3 707 aa9.9□□□□□ -0.82
HDAC3-212ENST00000492407 CSGALNACT1Q8TDX6 532 aa9.9□□□□□ -0.82
HDAC3-212ENST00000492407 PSMG2Q969U7 264 aa9.9□□□□□ -0.82
HDAC3-212ENST00000492407 HVCN1Q96D96 273 aa9.9□□□□□ -0.82
HDAC3-212ENST00000492407 TMX3Q96JJ7 454 aa9.9□□□□□ -0.82
HDAC3-212ENST00000492407 ZSWIM3Q96MP5 696 aa9.9□□□□□ -0.82
HDAC3-212ENST00000492407 REEP2Q9BRK0 252 aa9.9□□□□□ -0.82
HDAC3-212ENST00000492407 MSTO1Q9BUK6 570 aa9.9□□□□□ -0.82
HDAC3-212ENST00000492407 CCSER1Q9C0I3 900 aa9.9□□□□□ -0.82
HDAC3-212ENST00000492407 LMAN1LQ9HAT1 526 aa9.9□□□□□ -0.82
HDAC3-212ENST00000492407 NCDNQ9UBB6 729 aa9.9□□□□□ -0.82
HDAC3-212ENST00000492407 PIAS3Q9Y6X2 628 aa9.9□□□□□ -0.82
HDAC3-212ENST00000492407 NOTCH4Q99466 2003 aa9.9□□□□□ -0.82
HDAC3-212ENST00000492407 ANO9A1A5B4 782 aa9.89□□□□□ -0.83
HDAC3-212ENST00000492407 MTMR11A4FU01 709 aa9.89□□□□□ -0.83
HDAC3-212ENST00000492407 HEPACAM2A8MVW5 462 aa9.89□□□□□ -0.83
HDAC3-212ENST00000492407 TBCAO75347 108 aaKnown RBP9.89□□□□□ -0.83
HDAC3-212ENST00000492407 FAM13AO94988 1023 aa9.89□□□□□ -0.83
HDAC3-212ENST00000492407 VNN2O95498 520 aa9.89□□□□□ -0.83
HDAC3-212ENST00000492407 CHRNB1P11230 501 aa9.89□□□□□ -0.83
HDAC3-212ENST00000492407 TNFSF9P41273 254 aa9.89□□□□□ -0.83
HDAC3-212ENST00000492407 VIPR2P41587 438 aa9.89□□□□□ -0.83
HDAC3-212ENST00000492407 CXCL12P48061 93 aa9.89□□□□□ -0.83
HDAC3-212ENST00000492407 DUSP4Q13115 394 aa9.89□□□□□ -0.83
HDAC3-212ENST00000492407 GRM2Q14416 872 aa9.89□□□□□ -0.83
HDAC3-212ENST00000492407 POSTNQ15063 836 aa9.89□□□□□ -0.83
HDAC3-212ENST00000492407 PTPAQ15257 358 aa9.89□□□□□ -0.83
HDAC3-212ENST00000492407 TEAD2Q15562 447 aa9.89□□□□□ -0.83
HDAC3-212ENST00000492407 ARHGAP29Q52LW3 1261 aa9.89□□□□□ -0.83
HDAC3-212ENST00000492407 C9orf57Q5W0N0 161 aa9.89□□□□□ -0.83
HDAC3-212ENST00000492407 LARP1BQ659C4 914 aaKnown RBP9.89□□□□□ -0.83
HDAC3-212ENST00000492407 DNAJB7Q7Z6W7 309 aaPredicted RBP9.89□□□□□ -0.83
HDAC3-212ENST00000492407 GPBP1Q86WP2 473 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms