RNA–Protein interactions for RNA: ENST00000492361.1

TNFRSF1B-203, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best)

Gene TNFRSF1B, Length 3,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-203ENST00000492361 CNKSR2Q8WXI2 1034 aa16.07■□□□□ 0.16
TNFRSF1B-203ENST00000492361 TLCD1Q96CP7 247 aa16.07■□□□□ 0.16
TNFRSF1B-203ENST00000492361 RMDN2Q96LZ7 410 aa16.07■□□□□ 0.16
TNFRSF1B-203ENST00000492361 APOBEC3GQ9HC16 384 aaKnown RBP16.07■□□□□ 0.16
TNFRSF1B-203ENST00000492361 SLC24A3Q9HC58 644 aa16.07■□□□□ 0.16
TNFRSF1B-203ENST00000492361 MARCOQ9UEW3 520 aaPredicted RBP16.07■□□□□ 0.16
TNFRSF1B-203ENST00000492361 A0A1W2PPM1 405 aa16.06■□□□□ 0.16
TNFRSF1B-203ENST00000492361 SFNP31947 248 aa16.06■□□□□ 0.16
TNFRSF1B-203ENST00000492361 CPA2P48052 419 aa16.06■□□□□ 0.16
TNFRSF1B-203ENST00000492361 GMPSP49915 693 aaPredicted RBP16.06■□□□□ 0.16
TNFRSF1B-203ENST00000492361 PSMC1P62191 440 aaKnown RBP16.06■□□□□ 0.16
TNFRSF1B-203ENST00000492361 FAM71DQ8N9W8 422 aa16.06■□□□□ 0.16
TNFRSF1B-203ENST00000492361 FBF1Q8TES7 1133 aa16.06■□□□□ 0.16
TNFRSF1B-203ENST00000492361 ART4Q93070 314 aa16.06■□□□□ 0.16
TNFRSF1B-203ENST00000492361 XPNPEP1Q9NQW7 623 aa16.06■□□□□ 0.16
TNFRSF1B-203ENST00000492361 GPATCH2LQ9NWQ4 482 aa16.06■□□□□ 0.16
TNFRSF1B-203ENST00000492361 POLIQ9UNA4 740 aa16.06■□□□□ 0.16
TNFRSF1B-203ENST00000492361 PTGER2P43116 358 aa16.06■□□□□ 0.16
TNFRSF1B-203ENST00000492361 CLUL1Q15846 466 aa16.06■□□□□ 0.16
TNFRSF1B-203ENST00000492361 ANKS1BQ7Z6G8 1248 aa16.06■□□□□ 0.16
TNFRSF1B-203ENST00000492361 RTKN2Q8IZC4 609 aa16.06■□□□□ 0.16
TNFRSF1B-203ENST00000492361 CCT6BQ92526 530 aa16.06■□□□□ 0.16
TNFRSF1B-203ENST00000492361 PGM2Q96G03 612 aa16.06■□□□□ 0.16
TNFRSF1B-203ENST00000492361 SLC13A1Q9BZW2 595 aa16.06■□□□□ 0.16
TNFRSF1B-203ENST00000492361 MYCNP04198 464 aaPredicted RBP16.06■□□□□ 0.16
TNFRSF1B-203ENST00000492361 CYP1A2P05177 515 aa16.06■□□□□ 0.16
TNFRSF1B-203ENST00000492361 KRT4P19013 534 aa16.06■□□□□ 0.16
TNFRSF1B-203ENST00000492361 ALDH5A1P51649 535 aaPredicted RBP16.06■□□□□ 0.16
TNFRSF1B-203ENST00000492361 ELF3P78545 371 aaPredicted RBP16.06■□□□□ 0.16
TNFRSF1B-203ENST00000492361 TNFAIP1Q13829 316 aa16.06■□□□□ 0.16
TNFRSF1B-203ENST00000492361 LY6KQ17RY6 165 aa16.06■□□□□ 0.16
TNFRSF1B-203ENST00000492361 ZNF699Q32M78 642 aa16.06■□□□□ 0.16
TNFRSF1B-203ENST00000492361 SESTD1Q86VW0 696 aa16.06■□□□□ 0.16
TNFRSF1B-203ENST00000492361 ATXN2LQ8WWM7 1075 aaKnown RBP16.06■□□□□ 0.16
TNFRSF1B-203ENST00000492361 PRPF31Q8WWY3 499 aaKnown RBP16.06■□□□□ 0.16
TNFRSF1B-203ENST00000492361 A1CFQ9NQ94 594 aaKnown RBP16.06■□□□□ 0.16
TNFRSF1B-203ENST00000492361 MRPL42Q9Y6G3 142 aaKnown RBP16.06■□□□□ 0.16
TNFRSF1B-203ENST00000492361 ADAMTSL1Q8N6G6 1762 aa16.05■□□□□ 0.16
TNFRSF1B-203ENST00000492361 UBE4BO95155 1302 aa16.05■□□□□ 0.16
TNFRSF1B-203ENST00000492361 PROSCO94903 275 aa16.05■□□□□ 0.16
TNFRSF1B-203ENST00000492361 CBX6O95503 412 aa16.05■□□□□ 0.16
TNFRSF1B-203ENST00000492361 MAMLD1Q13495 774 aa16.05■□□□□ 0.16
TNFRSF1B-203ENST00000492361 RCN2Q14257 317 aa16.05■□□□□ 0.16
TNFRSF1B-203ENST00000492361 TRMT10CQ7L0Y3 403 aaKnown RBP16.05■□□□□ 0.16
TNFRSF1B-203ENST00000492361 FEZF2Q8TBJ5 459 aa16.05■□□□□ 0.16
TNFRSF1B-203ENST00000492361 LAMB2P55268 1798 aa16.05■□□□□ 0.16
TNFRSF1B-203ENST00000492361 SNX3O60493 162 aa16.05■□□□□ 0.16
TNFRSF1B-203ENST00000492361 MAPTP10636 758 aaKnown RBP16.05■□□□□ 0.16
TNFRSF1B-203ENST00000492361 HSD17B4P51659 736 aa16.05■□□□□ 0.16
TNFRSF1B-203ENST00000492361 MXRA7P84157 204 aa16.05■□□□□ 0.16
TNFRSF1B-203ENST00000492361 NEDD9Q14511 834 aa16.05■□□□□ 0.16
TNFRSF1B-203ENST00000492361 C3orf62Q6ZUJ4 267 aa16.05■□□□□ 0.16
TNFRSF1B-203ENST00000492361 NSMCE1Q8WV22 266 aa16.05■□□□□ 0.16
TNFRSF1B-203ENST00000492361 HEXIM2Q96MH2 286 aaKnown RBP16.05■□□□□ 0.16
TNFRSF1B-203ENST00000492361 ADAM7Q9H2U9 754 aa16.05■□□□□ 0.16
TNFRSF1B-203ENST00000492361 CXorf56Q9H5V9 222 aa16.05■□□□□ 0.16
TNFRSF1B-203ENST00000492361 UBN1Q9NPG3 1134 aa16.05■□□□□ 0.16
TNFRSF1B-203ENST00000492361 CFAP69A5D8W1 941 aa16.05■□□□□ 0.16
TNFRSF1B-203ENST00000492361 C2orf71A6NGG8 1288 aa16.05■□□□□ 0.16
TNFRSF1B-203ENST00000492361 CDH16O75309 829 aa16.05■□□□□ 0.16
TNFRSF1B-203ENST00000492361 GGPS1O95749 300 aa16.05■□□□□ 0.16
TNFRSF1B-203ENST00000492361 NUDT17P0C025 328 aa16.05■□□□□ 0.16
TNFRSF1B-203ENST00000492361 GJC2Q5T442 439 aaPredicted RBP16.05■□□□□ 0.16
TNFRSF1B-203ENST00000492361 DARS2Q6PI48 645 aaKnown RBP16.05■□□□□ 0.16
TNFRSF1B-203ENST00000492361 MAIP1Q8WWC4 291 aa16.05■□□□□ 0.16
TNFRSF1B-203ENST00000492361 PPP1R12CQ9BZL4 782 aa16.05■□□□□ 0.16
TNFRSF1B-203ENST00000492361 CENPFP49454 3210 aa16.04■□□□□ 0.16
TNFRSF1B-203ENST00000492361 SLC26A4O43511 780 aa16.04■□□□□ 0.16
TNFRSF1B-203ENST00000492361 EXTL3O43909 919 aa16.04■□□□□ 0.16
TNFRSF1B-203ENST00000492361 TJP3O95049 919 aa16.04■□□□□ 0.16
TNFRSF1B-203ENST00000492361 PDHA1P08559 390 aa16.04■□□□□ 0.16
TNFRSF1B-203ENST00000492361 TMEM62Q0P6H9 643 aa16.04■□□□□ 0.16
TNFRSF1B-203ENST00000492361 TFDP1Q14186 410 aa16.04■□□□□ 0.16
TNFRSF1B-203ENST00000492361 ZNF568Q3ZCX4 644 aa16.04■□□□□ 0.16
TNFRSF1B-203ENST00000492361 OR6B2Q6IFH4 312 aa16.04■□□□□ 0.16
TNFRSF1B-203ENST00000492361 ARMC9Q7Z3E5 817 aa16.04■□□□□ 0.16
TNFRSF1B-203ENST00000492361 PPP1R14CQ8TAE6 165 aa16.04■□□□□ 0.16
TNFRSF1B-203ENST00000492361 SYT11Q9BT88 431 aa16.04■□□□□ 0.16
TNFRSF1B-203ENST00000492361 MIS12Q9H081 205 aa16.04■□□□□ 0.16
TNFRSF1B-203ENST00000492361 AAASQ9NRG9 546 aa16.04■□□□□ 0.16
TNFRSF1B-203ENST00000492361 ZNF541Q9H0D2 1346 aa16.04■□□□□ 0.16
TNFRSF1B-203ENST00000492361 P4HA2O15460 535 aa16.04■□□□□ 0.16
TNFRSF1B-203ENST00000492361 PCK1P35558 622 aa16.04■□□□□ 0.16
TNFRSF1B-203ENST00000492361 GPC3P51654 580 aa16.04■□□□□ 0.16
TNFRSF1B-203ENST00000492361 CLCN3P51790 818 aa16.04■□□□□ 0.16
TNFRSF1B-203ENST00000492361 SP2Q02086 613 aa16.04■□□□□ 0.16
TNFRSF1B-203ENST00000492361 AMHR2Q16671 573 aa16.04■□□□□ 0.16
TNFRSF1B-203ENST00000492361 OLIG1Q8TAK6 271 aa16.04■□□□□ 0.16
TNFRSF1B-203ENST00000492361 RSRC1Q96IZ7 334 aaKnown RBP16.04■□□□□ 0.16
TNFRSF1B-203ENST00000492361 CFAP57Q96MR6 1250 aa16.04■□□□□ 0.16
TNFRSF1B-203ENST00000492361 SENP7Q9BQF6 1050 aa16.04■□□□□ 0.16
TNFRSF1B-203ENST00000492361 ZNF408Q9H9D4 720 aa16.04■□□□□ 0.16
TNFRSF1B-203ENST00000492361 PARVAQ9NVD7 372 aa16.04■□□□□ 0.16
TNFRSF1B-203ENST00000492361 ATP6V1G2O95670 118 aa16.03■□□□□ 0.16
TNFRSF1B-203ENST00000492361 KRT16P08779 473 aa16.03■□□□□ 0.16
TNFRSF1B-203ENST00000492361 RPA3P35244 121 aaPredicted RBP16.03■□□□□ 0.16
TNFRSF1B-203ENST00000492361 TAF5Q15542 800 aa16.03■□□□□ 0.16
TNFRSF1B-203ENST00000492361 STXBP2Q15833 593 aa16.03■□□□□ 0.16
TNFRSF1B-203ENST00000492361 LVRNQ6Q4G3 990 aa16.03■□□□□ 0.16
TNFRSF1B-203ENST00000492361 C6orf89Q6UWU4 347 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms