RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 ARNTLO00327 626 aa9.08□□□□□ -0.96
SMARCB1-207ENST00000491967 DCNP07585 359 aaKnown RBP9.08□□□□□ -0.96
SMARCB1-207ENST00000491967 NFICP08651 508 aa9.08□□□□□ -0.96
SMARCB1-207ENST00000491967 MAGEA9P43362 315 aa9.08□□□□□ -0.96
SMARCB1-207ENST00000491967 RPS9P46781 194 aaKnown RBP9.08□□□□□ -0.96
SMARCB1-207ENST00000491967 ACOT2P49753 483 aa9.08□□□□□ -0.96
SMARCB1-207ENST00000491967 ARPP19P56211 112 aa9.08□□□□□ -0.96
SMARCB1-207ENST00000491967 KCNA1Q09470 495 aa9.08□□□□□ -0.96
SMARCB1-207ENST00000491967 TWF1Q12792 350 aa9.08□□□□□ -0.96
SMARCB1-207ENST00000491967 SNW1Q13573 536 aaKnown RBP9.08□□□□□ -0.96
SMARCB1-207ENST00000491967 TMEM132DQ14C87 1099 aa9.08□□□□□ -0.96
SMARCB1-207ENST00000491967 ZNF528Q3MIS6 628 aa9.08□□□□□ -0.96
SMARCB1-207ENST00000491967 CYP4A22Q5TCH4 519 aa9.08□□□□□ -0.96
SMARCB1-207ENST00000491967 RRAGBQ5VZM2 374 aa9.08□□□□□ -0.96
SMARCB1-207ENST00000491967 OVOS1Q6IE37 1185 aa9.08□□□□□ -0.96
SMARCB1-207ENST00000491967 IQCEQ6IPM2 695 aa9.08□□□□□ -0.96
SMARCB1-207ENST00000491967 FAM173BQ6P4H8 233 aa9.08□□□□□ -0.96
SMARCB1-207ENST00000491967 CNNM4Q6P4Q7 775 aa9.08□□□□□ -0.96
SMARCB1-207ENST00000491967 SFR1Q86XK3 245 aa9.08□□□□□ -0.96
SMARCB1-207ENST00000491967 C1orf210Q8IVY1 113 aa9.08□□□□□ -0.96
SMARCB1-207ENST00000491967 HS6ST3Q8IZP7 471 aa9.08□□□□□ -0.96
SMARCB1-207ENST00000491967 SMARCD2Q92925 531 aa9.08□□□□□ -0.96
SMARCB1-207ENST00000491967 NKD2Q969F2 451 aaPredicted RBP9.08□□□□□ -0.96
SMARCB1-207ENST00000491967 ZNF512Q96ME7 567 aaPredicted RBP9.08□□□□□ -0.96
SMARCB1-207ENST00000491967 USP28Q96RU2 1077 aa9.08□□□□□ -0.96
SMARCB1-207ENST00000491967 MKNK1Q9BUB5 465 aa9.08□□□□□ -0.96
SMARCB1-207ENST00000491967 FOXQ1Q9C009 403 aa9.08□□□□□ -0.96
SMARCB1-207ENST00000491967 GPR88Q9GZN0 384 aa9.08□□□□□ -0.96
SMARCB1-207ENST00000491967 IKZF4Q9H2S9 585 aa9.08□□□□□ -0.96
SMARCB1-207ENST00000491967 ZSCAN16Q9H4T2 348 aaPredicted RBP9.08□□□□□ -0.96
SMARCB1-207ENST00000491967 ZFP14Q9HCL3 533 aa9.08□□□□□ -0.96
SMARCB1-207ENST00000491967 LTB4R2Q9NPC1 389 aa9.08□□□□□ -0.96
SMARCB1-207ENST00000491967 AGO2Q9UKV8 859 aaKnown RBP9.08□□□□□ -0.96
SMARCB1-207ENST00000491967 YIPF1Q9Y548 306 aa9.08□□□□□ -0.96
SMARCB1-207ENST00000491967 ASB3Q9Y575 518 aa9.08□□□□□ -0.96
SMARCB1-207ENST00000491967 TIMM13Q9Y5L4 95 aaPredicted RBP9.08□□□□□ -0.96
SMARCB1-207ENST00000491967 CEP250Q9BV73 2442 aa9.07□□□□□ -0.96
SMARCB1-207ENST00000491967 NUP210Q8TEM1 1887 aaPredicted RBP9.07□□□□□ -0.96
SMARCB1-207ENST00000491967 MTMR11A4FU01 709 aa9.07□□□□□ -0.96
SMARCB1-207ENST00000491967 VPS37CA5D8V6 355 aaPredicted RBP9.07□□□□□ -0.96
SMARCB1-207ENST00000491967 LRRN2O75325 713 aa9.07□□□□□ -0.96
SMARCB1-207ENST00000491967 IL18RAPO95256 599 aa9.07□□□□□ -0.96
SMARCB1-207ENST00000491967 KRT18P05783 430 aaKnown RBP9.07□□□□□ -0.96
SMARCB1-207ENST00000491967 OR4Q2P0C623 313 aa9.07□□□□□ -0.96
SMARCB1-207ENST00000491967 SP9P0CG40 484 aa9.07□□□□□ -0.96
SMARCB1-207ENST00000491967 MATR3P43243 847 aaKnown RBP eCLIP9.07□□□□□ -0.96
SMARCB1-207ENST00000491967 CASP5P51878 434 aa9.07□□□□□ -0.96
SMARCB1-207ENST00000491967 SMARCB1Q12824 385 aa9.07□□□□□ -0.96
SMARCB1-207ENST00000491967 DUSP4Q13115 394 aa9.07□□□□□ -0.96
SMARCB1-207ENST00000491967 PLD1Q13393 1074 aa9.07□□□□□ -0.96
SMARCB1-207ENST00000491967 ALCAMQ13740 583 aa9.07□□□□□ -0.96
SMARCB1-207ENST00000491967 E2F4Q16254 413 aa9.07□□□□□ -0.96
SMARCB1-207ENST00000491967 L1TD1Q5T7N2 865 aaKnown RBP9.07□□□□□ -0.96
SMARCB1-207ENST00000491967 ADALQ6DHV7 355 aa9.07□□□□□ -0.96
SMARCB1-207ENST00000491967 CCDC73Q6ZRK6 1079 aa9.07□□□□□ -0.96
SMARCB1-207ENST00000491967 GAREM2Q75VX8 874 aa9.07□□□□□ -0.96
SMARCB1-207ENST00000491967 PDZD4Q76G19 769 aaPredicted RBP9.07□□□□□ -0.96
SMARCB1-207ENST00000491967 SV2BQ7L1I2 683 aa9.07□□□□□ -0.96
SMARCB1-207ENST00000491967 USP37Q86T82 979 aa9.07□□□□□ -0.96
SMARCB1-207ENST00000491967 LRRTM3Q86VH5 581 aa9.07□□□□□ -0.96
SMARCB1-207ENST00000491967 EFCAB13Q8IY85 973 aa9.07□□□□□ -0.96
SMARCB1-207ENST00000491967 ATAD1Q8NBU5 361 aa9.07□□□□□ -0.96
SMARCB1-207ENST00000491967 LINC00301Q8NCQ3 95 aa9.07□□□□□ -0.96
SMARCB1-207ENST00000491967 OR10T2Q8NGX3 314 aa9.07□□□□□ -0.96
SMARCB1-207ENST00000491967 SHKBP1Q8TBC3 707 aa9.07□□□□□ -0.96
SMARCB1-207ENST00000491967 SNX21Q969T3 373 aa9.07□□□□□ -0.96
SMARCB1-207ENST00000491967 PSMG2Q969U7 264 aa9.07□□□□□ -0.96
SMARCB1-207ENST00000491967 ZCWPW1Q9H0M4 648 aa9.07□□□□□ -0.96
SMARCB1-207ENST00000491967 KBTBD4Q9NVX7 518 aa9.07□□□□□ -0.96
SMARCB1-207ENST00000491967 DPP3Q9NY33 737 aa9.07□□□□□ -0.96
SMARCB1-207ENST00000491967 FBXO4Q9UKT5 387 aa9.07□□□□□ -0.96
SMARCB1-207ENST00000491967 DSEQ9UL01 958 aa9.07□□□□□ -0.96
SMARCB1-207ENST00000491967 DMDP11532 3685 aa9.07□□□□□ -0.96
SMARCB1-207ENST00000491967 TICRRQ7Z2Z1 1910 aa9.07□□□□□ -0.96
SMARCB1-207ENST00000491967 NCANO14594 1321 aa9.06□□□□□ -0.96
SMARCB1-207ENST00000491967 KIF26AQ9ULI4 1882 aaPredicted RBP9.06□□□□□ -0.96
SMARCB1-207ENST00000491967 FAM170BA6NMN3 283 aa9.06□□□□□ -0.96
SMARCB1-207ENST00000491967 KPNA7A9QM74 516 aa9.06□□□□□ -0.96
SMARCB1-207ENST00000491967 STK25O00506 426 aa9.06□□□□□ -0.96
SMARCB1-207ENST00000491967 STX6O43752 255 aa9.06□□□□□ -0.96
SMARCB1-207ENST00000491967 PPP6R2O75170 966 aa9.06□□□□□ -0.96
SMARCB1-207ENST00000491967 ODC1P11926 461 aa9.06□□□□□ -0.96
SMARCB1-207ENST00000491967 CPB1P15086 417 aa9.06□□□□□ -0.96
SMARCB1-207ENST00000491967 PSMC3P17980 439 aa9.06□□□□□ -0.96
SMARCB1-207ENST00000491967 GARTP22102 1010 aa9.06□□□□□ -0.96
SMARCB1-207ENST00000491967 HOXD13P35453 343 aa9.06□□□□□ -0.96
SMARCB1-207ENST00000491967 EPHB3P54753 998 aa9.06□□□□□ -0.96
SMARCB1-207ENST00000491967 WNT7BP56706 349 aa9.06□□□□□ -0.96
SMARCB1-207ENST00000491967 FCHO2Q0JRZ9 810 aa9.06□□□□□ -0.96
SMARCB1-207ENST00000491967 TEAD2Q15562 447 aa9.06□□□□□ -0.96
SMARCB1-207ENST00000491967 VITQ6UXI7 678 aa9.06□□□□□ -0.96
SMARCB1-207ENST00000491967 DSTYKQ6XUX3 929 aa9.06□□□□□ -0.96
SMARCB1-207ENST00000491967 DYMQ7RTS9 669 aa9.06□□□□□ -0.96
SMARCB1-207ENST00000491967 LIMS2Q7Z4I7 341 aa9.06□□□□□ -0.96
SMARCB1-207ENST00000491967 DNAJB7Q7Z6W7 309 aaPredicted RBP9.06□□□□□ -0.96
SMARCB1-207ENST00000491967 MFSD6LQ8IWD5 586 aa9.06□□□□□ -0.96
SMARCB1-207ENST00000491967 ELMOD1Q8N336 334 aa9.06□□□□□ -0.96
SMARCB1-207ENST00000491967 TTC9BQ8N6N2 239 aa9.06□□□□□ -0.96
SMARCB1-207ENST00000491967 ZSWIM2Q8NEG5 633 aa9.06□□□□□ -0.96
SMARCB1-207ENST00000491967 RASSF8Q8NHQ8 419 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms