RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 CITO14578 2027 aa12.2□□□□□ -0.46
CLCNKA-206ENST00000491433 SLC38A8A6NNN8 435 aa12.2□□□□□ -0.46
CLCNKA-206ENST00000491433 MOSPD3O75425 235 aa12.2□□□□□ -0.46
CLCNKA-206ENST00000491433 KRT38O76015 456 aa12.2□□□□□ -0.46
CLCNKA-206ENST00000491433 REC8O95072 547 aa12.2□□□□□ -0.46
CLCNKA-206ENST00000491433 MARCKSP29966 332 aaPredicted RBP12.2□□□□□ -0.46
CLCNKA-206ENST00000491433 KRT2P35908 639 aa12.2□□□□□ -0.46
CLCNKA-206ENST00000491433 MPLP40238 635 aa12.2□□□□□ -0.46
CLCNKA-206ENST00000491433 GRM5P41594 1212 aa12.2□□□□□ -0.46
CLCNKA-206ENST00000491433 TXKP42681 527 aa12.2□□□□□ -0.46
CLCNKA-206ENST00000491433 EPHB3P54753 998 aa12.2□□□□□ -0.46
CLCNKA-206ENST00000491433 AMPD2Q01433 879 aa12.2□□□□□ -0.46
CLCNKA-206ENST00000491433 CCINQ13939 588 aa12.2□□□□□ -0.46
CLCNKA-206ENST00000491433 TOB2Q14106 344 aaPredicted RBP12.2□□□□□ -0.46
CLCNKA-206ENST00000491433 ARHGAP15Q53QZ3 475 aa12.2□□□□□ -0.46
CLCNKA-206ENST00000491433 XKR4Q5GH76 650 aa12.2□□□□□ -0.46
CLCNKA-206ENST00000491433 Q6ZS52 159 aa12.2□□□□□ -0.46
CLCNKA-206ENST00000491433 HS6ST3Q8IZP7 471 aa12.2□□□□□ -0.46
CLCNKA-206ENST00000491433 ZC3H10Q96K80 434 aaKnown RBP12.2□□□□□ -0.46
CLCNKA-206ENST00000491433 SUSD3Q96L08 255 aa12.2□□□□□ -0.46
CLCNKA-206ENST00000491433 CXCL16Q9H2A7 254 aa12.2□□□□□ -0.46
CLCNKA-206ENST00000491433 GOLGA2P5Q9HBQ8 144 aa12.2□□□□□ -0.46
CLCNKA-206ENST00000491433 SCUBE2Q9NQ36 999 aa12.2□□□□□ -0.46
CLCNKA-206ENST00000491433 THG1LQ9NWX6 298 aaKnown RBP12.2□□□□□ -0.46
CLCNKA-206ENST00000491433 CEP72Q9P209 647 aa12.2□□□□□ -0.46
CLCNKA-206ENST00000491433 SLC8A2Q9UPR5 921 aa12.2□□□□□ -0.46
CLCNKA-206ENST00000491433 TNFSF13BQ9Y275 285 aa12.2□□□□□ -0.46
CLCNKA-206ENST00000491433 ASB3Q9Y575 518 aa12.2□□□□□ -0.46
CLCNKA-206ENST00000491433 TEX15Q9BXT5 2789 aa12.2□□□□□ -0.46
CLCNKA-206ENST00000491433 ARHGEF35A5YM69 484 aa12.19□□□□□ -0.46
CLCNKA-206ENST00000491433 TTLL13PA6NNM8 815 aa12.19□□□□□ -0.46
CLCNKA-206ENST00000491433 K7ERI5 159 aa12.19□□□□□ -0.46
CLCNKA-206ENST00000491433 EPB41L2O43491 1005 aaKnown RBP12.19□□□□□ -0.46
CLCNKA-206ENST00000491433 NEMFO60524 1076 aa12.19□□□□□ -0.46
CLCNKA-206ENST00000491433 RHOBTB1O94844 696 aa12.19□□□□□ -0.46
CLCNKA-206ENST00000491433 CAPNS1P04632 268 aa12.19□□□□□ -0.46
CLCNKA-206ENST00000491433 CYP11B2P19099 503 aa12.19□□□□□ -0.46
CLCNKA-206ENST00000491433 CSRP1P21291 193 aaKnown RBP12.19□□□□□ -0.46
CLCNKA-206ENST00000491433 MCM4P33991 863 aa12.19□□□□□ -0.46
CLCNKA-206ENST00000491433 ALDH1A3P47895 512 aa12.19□□□□□ -0.46
CLCNKA-206ENST00000491433 SRSF1Q07955 248 aaKnown RBP eCLIP12.19□□□□□ -0.46
CLCNKA-206ENST00000491433 KARSQ15046 597 aaKnown RBP12.19□□□□□ -0.46
CLCNKA-206ENST00000491433 PON2Q15165 354 aa12.19□□□□□ -0.46
CLCNKA-206ENST00000491433 ELF2Q15723 593 aa12.19□□□□□ -0.46
CLCNKA-206ENST00000491433 EEF1DP3Q658K8 133 aa12.19□□□□□ -0.46
CLCNKA-206ENST00000491433 ERMNQ8TAM6 284 aa12.19□□□□□ -0.46
CLCNKA-206ENST00000491433 SHKBP1Q8TBC3 707 aa12.19□□□□□ -0.46
CLCNKA-206ENST00000491433 KIFAP3Q92845 792 aa12.19□□□□□ -0.46
CLCNKA-206ENST00000491433 ZSWIM6Q9HCJ5 1215 aa12.19□□□□□ -0.46
CLCNKA-206ENST00000491433 ZMYM5Q9UJ78 669 aa12.19□□□□□ -0.46
CLCNKA-206ENST00000491433 CFAP46Q8IYW2 2715 aa12.18□□□□□ -0.46
CLCNKA-206ENST00000491433 A0A1W2PRU2 124 aa12.18□□□□□ -0.46
CLCNKA-206ENST00000491433 KCNE1P15382 129 aa12.18□□□□□ -0.46
CLCNKA-206ENST00000491433 GJA1P17302 382 aa12.18□□□□□ -0.46
CLCNKA-206ENST00000491433 MUTP22033 750 aa12.18□□□□□ -0.46
CLCNKA-206ENST00000491433 WEE1P30291 646 aa12.18□□□□□ -0.46
CLCNKA-206ENST00000491433 SOX9P48436 509 aa12.18□□□□□ -0.46
CLCNKA-206ENST00000491433 GRSF1Q12849 480 aaKnown RBP eCLIP12.18□□□□□ -0.46
CLCNKA-206ENST00000491433 STK3Q13188 491 aa12.18□□□□□ -0.46
CLCNKA-206ENST00000491433 PADI6Q6TGC4 694 aa12.18□□□□□ -0.46
CLCNKA-206ENST00000491433 ALKAL1Q6UXT8 129 aa12.18□□□□□ -0.46
CLCNKA-206ENST00000491433 ITIH5Q86UX2 942 aa12.18□□□□□ -0.46
CLCNKA-206ENST00000491433 KBTBD6Q86V97 674 aa12.18□□□□□ -0.46
CLCNKA-206ENST00000491433 C11orf74Q86VG3 221 aa12.18□□□□□ -0.46
CLCNKA-206ENST00000491433 ARID3BQ8IVW6 561 aaPredicted RBP12.18□□□□□ -0.46
CLCNKA-206ENST00000491433 DDX12PQ92771 950 aa12.18□□□□□ -0.46
CLCNKA-206ENST00000491433 ACAP3Q96P50 834 aa12.18□□□□□ -0.46
CLCNKA-206ENST00000491433 TMEM209Q96SK2 561 aa12.18□□□□□ -0.46
CLCNKA-206ENST00000491433 POLR3CQ9BUI4 534 aaPredicted RBP12.18□□□□□ -0.46
CLCNKA-206ENST00000491433 PCDHB8Q9UN66 801 aa12.18□□□□□ -0.46
CLCNKA-206ENST00000491433 YIPF1Q9Y548 306 aa12.18□□□□□ -0.46
CLCNKA-206ENST00000491433 NRG2O14511 850 aaPredicted RBP12.17□□□□□ -0.46
CLCNKA-206ENST00000491433 SPATA31C1P0DKV0 1188 aa12.17□□□□□ -0.46
CLCNKA-206ENST00000491433 IGFBP6P24592 240 aaPredicted RBP12.17□□□□□ -0.46
CLCNKA-206ENST00000491433 YWHAHQ04917 246 aaPredicted RBP12.17□□□□□ -0.46
CLCNKA-206ENST00000491433 SOX4Q06945 474 aaPredicted RBP12.17□□□□□ -0.46
CLCNKA-206ENST00000491433 ITPRIPL2Q3MIP1 535 aa12.17□□□□□ -0.46
CLCNKA-206ENST00000491433 ZNF568Q3ZCX4 644 aa12.17□□□□□ -0.46
CLCNKA-206ENST00000491433 TXNDC11Q6PKC3 985 aa12.17□□□□□ -0.46
CLCNKA-206ENST00000491433 CATSPER3Q86XQ3 398 aa12.17□□□□□ -0.46
CLCNKA-206ENST00000491433 BEST2Q8NFU1 509 aa12.17□□□□□ -0.46
CLCNKA-206ENST00000491433 BPIFB1Q8TDL5 484 aa12.17□□□□□ -0.46
CLCNKA-206ENST00000491433 OXER1Q8TDS5 423 aa12.17□□□□□ -0.46
CLCNKA-206ENST00000491433 BSNDQ8WZ55 320 aa12.17□□□□□ -0.46
CLCNKA-206ENST00000491433 EDEM2Q9BV94 578 aa12.17□□□□□ -0.46
CLCNKA-206ENST00000491433 MRPL4Q9BYD3 311 aaKnown RBP12.17□□□□□ -0.46
CLCNKA-206ENST00000491433 TM6SF1Q9BZW5 370 aa12.17□□□□□ -0.46
CLCNKA-206ENST00000491433 GTSE1Q9NYZ3 720 aa12.17□□□□□ -0.46
CLCNKA-206ENST00000491433 CNTN3Q9P232 1028 aa12.17□□□□□ -0.46
CLCNKA-206ENST00000491433 KIF26AQ9ULI4 1882 aaPredicted RBP12.17□□□□□ -0.46
CLCNKA-206ENST00000491433 OR6C75A6NL08 312 aa12.16□□□□□ -0.46
CLCNKA-206ENST00000491433 C4orf47A7E2U8 309 aa12.16□□□□□ -0.46
CLCNKA-206ENST00000491433 EXTL3O43909 919 aa12.16□□□□□ -0.46
CLCNKA-206ENST00000491433 OAZ2O95190 189 aa12.16□□□□□ -0.46
CLCNKA-206ENST00000491433 MCF2P10911 925 aa12.16□□□□□ -0.46
CLCNKA-206ENST00000491433 RPA1P27694 616 aa12.16□□□□□ -0.46
CLCNKA-206ENST00000491433 MCM2P49736 904 aa12.16□□□□□ -0.46
CLCNKA-206ENST00000491433 PLK5Q496M5 336 aa12.16□□□□□ -0.46
CLCNKA-206ENST00000491433 FBXO43Q4G163 708 aa12.16□□□□□ -0.46
CLCNKA-206ENST00000491433 NT5DC1Q5TFE4 455 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms