RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 PBX4Q9BYU1 374 aa23.29■■□□□ 1.32
VCPKMT-204ENST00000491402 NUCKS1Q9H1E3 243 aaKnown RBP23.29■■□□□ 1.32
VCPKMT-204ENST00000491402 SMYD3Q9H7B4 428 aa23.29■■□□□ 1.32
VCPKMT-204ENST00000491402 F8W810 466 aa23.28■■□□□ 1.32
VCPKMT-204ENST00000491402 ITGB1P05556 798 aa23.28■■□□□ 1.32
VCPKMT-204ENST00000491402 WEE2P0C1S8 567 aa23.28■■□□□ 1.32
VCPKMT-204ENST00000491402 AARSP49588 968 aaKnown RBP eCLIP23.28■■□□□ 1.32
VCPKMT-204ENST00000491402 BTG3Q14201 252 aaPredicted RBP23.28■■□□□ 1.32
VCPKMT-204ENST00000491402 CD300LGQ6UXG3 332 aa23.28■■□□□ 1.32
VCPKMT-204ENST00000491402 HASPINQ8TF76 798 aa23.28■■□□□ 1.32
VCPKMT-204ENST00000491402 TMEM175Q9BSA9 504 aa23.28■■□□□ 1.32
VCPKMT-204ENST00000491402 CWH43Q9H720 699 aa23.28■■□□□ 1.32
VCPKMT-204ENST00000491402 PRG3Q9Y2Y8 225 aaPredicted RBP23.28■■□□□ 1.32
VCPKMT-204ENST00000491402 GBF1Q92538 1859 aa23.28■■□□□ 1.32
VCPKMT-204ENST00000491402 TMEM189-UBE2V1I3L0A0 370 aa23.27■■□□□ 1.32
VCPKMT-204ENST00000491402 FOXN3O00409 490 aaPredicted RBP23.27■■□□□ 1.32
VCPKMT-204ENST00000491402 SOX5P35711 763 aa23.27■■□□□ 1.32
VCPKMT-204ENST00000491402 RAP1GAPP47736 663 aa23.27■■□□□ 1.32
VCPKMT-204ENST00000491402 LRIT3Q3SXY7 679 aa23.27■■□□□ 1.32
VCPKMT-204ENST00000491402 E4F1Q66K89 784 aaPredicted RBP23.27■■□□□ 1.32
VCPKMT-204ENST00000491402 YBX2Q9Y2T7 364 aaKnown RBP23.27■■□□□ 1.32
VCPKMT-204ENST00000491402 PCDHA11Q9Y5I1 949 aa23.27■■□□□ 1.32
VCPKMT-204ENST00000491402 NRP1O14786 923 aa23.27■■□□□ 1.32
VCPKMT-204ENST00000491402 ALDH2P05091 517 aa23.27■■□□□ 1.32
VCPKMT-204ENST00000491402 ACO1P21399 889 aaKnown RBP23.27■■□□□ 1.32
VCPKMT-204ENST00000491402 STAT1P42224 750 aa23.27■■□□□ 1.32
VCPKMT-204ENST00000491402 SLC11A1P49279 550 aa23.27■■□□□ 1.32
VCPKMT-204ENST00000491402 SFMBT2Q5VUG0 894 aa23.27■■□□□ 1.32
VCPKMT-204ENST00000491402 UBR7Q8N806 425 aa23.27■■□□□ 1.32
VCPKMT-204ENST00000491402 PANX2Q96RD6 677 aa23.27■■□□□ 1.32
VCPKMT-204ENST00000491402 SDCBP2Q9H190 292 aa23.27■■□□□ 1.32
VCPKMT-204ENST00000491402 CYP3A43Q9HB55 503 aa23.27■■□□□ 1.32
VCPKMT-204ENST00000491402 CISHQ9NSE2 258 aa23.27■■□□□ 1.32
VCPKMT-204ENST00000491402 KIAA1671Q9BY89 1806 aa23.27■■□□□ 1.31
VCPKMT-204ENST00000491402 GALTP07902 379 aa23.26■■□□□ 1.31
VCPKMT-204ENST00000491402 CD58P19256 250 aa23.26■■□□□ 1.31
VCPKMT-204ENST00000491402 PBX3P40426 434 aa23.26■■□□□ 1.31
VCPKMT-204ENST00000491402 CDH8P55286 799 aa23.26■■□□□ 1.31
VCPKMT-204ENST00000491402 BCAR1P56945 870 aa23.26■■□□□ 1.31
VCPKMT-204ENST00000491402 SOWAHAQ2M3V2 549 aa23.26■■□□□ 1.31
VCPKMT-204ENST00000491402 TIGD5Q53EQ6 642 aa23.26■■□□□ 1.31
VCPKMT-204ENST00000491402 GPIHBP1Q8IV16 184 aa23.26■■□□□ 1.31
VCPKMT-204ENST00000491402 SYN2Q92777 582 aaPredicted RBP23.26■■□□□ 1.31
VCPKMT-204ENST00000491402 AIPL1Q9NZN9 384 aa23.26■■□□□ 1.31
VCPKMT-204ENST00000491402 MSRAQ9UJ68 235 aa23.26■■□□□ 1.31
VCPKMT-204ENST00000491402 FAN1Q9Y2M0 1017 aa23.26■■□□□ 1.31
VCPKMT-204ENST00000491402 CA3P07451 260 aa23.25■■□□□ 1.31
VCPKMT-204ENST00000491402 PAX3P23760 479 aa23.25■■□□□ 1.31
VCPKMT-204ENST00000491402 HNRNPH3P31942 346 aaKnown RBP23.25■■□□□ 1.31
VCPKMT-204ENST00000491402 USP8P40818 1118 aa23.25■■□□□ 1.31
VCPKMT-204ENST00000491402 SMAD3P84022 425 aaKnown RBP23.25■■□□□ 1.31
VCPKMT-204ENST00000491402 TSR1Q2NL82 804 aaKnown RBP23.25■■□□□ 1.31
VCPKMT-204ENST00000491402 LIMS2Q7Z4I7 341 aa23.25■■□□□ 1.31
VCPKMT-204ENST00000491402 FAM71AQ8IYT1 594 aa23.25■■□□□ 1.31
VCPKMT-204ENST00000491402 APPL2Q8NEU8 664 aa23.25■■□□□ 1.31
VCPKMT-204ENST00000491402 SENP8Q96LD8 212 aa23.25■■□□□ 1.31
VCPKMT-204ENST00000491402 MRPL42Q9Y6G3 142 aaKnown RBP23.25■■□□□ 1.31
VCPKMT-204ENST00000491402 CHD9Q3L8U1 2897 aa23.25■■□□□ 1.31
VCPKMT-204ENST00000491402 TSC2P49815 1807 aa23.25■■□□□ 1.31
VCPKMT-204ENST00000491402 CYB561D2O14569 222 aa23.24■■□□□ 1.31
VCPKMT-204ENST00000491402 HUS1O60921 280 aa23.24■■□□□ 1.31
VCPKMT-204ENST00000491402 GFPT2O94808 682 aa23.24■■□□□ 1.31
VCPKMT-204ENST00000491402 KRT5P13647 590 aa23.24■■□□□ 1.31
VCPKMT-204ENST00000491402 BRCC3P46736 316 aa23.24■■□□□ 1.31
VCPKMT-204ENST00000491402 ALDH7A1P49419 539 aaKnown RBP23.24■■□□□ 1.31
VCPKMT-204ENST00000491402 YWHAEP62258 255 aaKnown RBP23.24■■□□□ 1.31
VCPKMT-204ENST00000491402 ARID5AQ03989 594 aa23.24■■□□□ 1.31
VCPKMT-204ENST00000491402 RAB30Q15771 203 aa23.24■■□□□ 1.31
VCPKMT-204ENST00000491402 TMEM270Q6UE05 265 aa23.24■■□□□ 1.31
VCPKMT-204ENST00000491402 DSTYKQ6XUX3 929 aa23.24■■□□□ 1.31
VCPKMT-204ENST00000491402 FMNL3Q8IVF7 1028 aa23.24■■□□□ 1.31
VCPKMT-204ENST00000491402 LRRC8AQ8IWT6 810 aa23.24■■□□□ 1.31
VCPKMT-204ENST00000491402 FIBCD1Q8N539 461 aa23.24■■□□□ 1.31
VCPKMT-204ENST00000491402 TOP6BLQ8N6T0 577 aa23.24■■□□□ 1.31
VCPKMT-204ENST00000491402 SP7Q8TDD2 431 aaPredicted RBP23.24■■□□□ 1.31
VCPKMT-204ENST00000491402 FAM124BQ9H5Z6 455 aaPredicted RBP23.24■■□□□ 1.31
VCPKMT-204ENST00000491402 MARCH5Q9NX47 278 aa23.24■■□□□ 1.31
VCPKMT-204ENST00000491402 L1RE1Q9UN81 338 aa23.24■■□□□ 1.31
VCPKMT-204ENST00000491402 CNTN6Q9UQ52 1028 aa23.24■■□□□ 1.31
VCPKMT-204ENST00000491402 PCDHB4Q9Y5E5 795 aa23.24■■□□□ 1.31
VCPKMT-204ENST00000491402 I3L4J1 428 aa23.24■■□□□ 1.31
VCPKMT-204ENST00000491402 ARHGEF15O94989 841 aa23.24■■□□□ 1.31
VCPKMT-204ENST00000491402 INCA1Q0VD86 236 aa23.24■■□□□ 1.31
VCPKMT-204ENST00000491402 SPOUT1Q5T280 376 aaKnown RBP23.24■■□□□ 1.31
VCPKMT-204ENST00000491402 WDR59Q6PJI9 974 aa23.24■■□□□ 1.31
VCPKMT-204ENST00000491402 DPH6Q7L8W6 267 aa23.24■■□□□ 1.31
VCPKMT-204ENST00000491402 COLEC11Q9BWP8 271 aa23.24■■□□□ 1.31
VCPKMT-204ENST00000491402 NKX2-4Q9H2Z4 354 aa23.24■■□□□ 1.31
VCPKMT-204ENST00000491402 ADAM28Q9UKQ2 775 aa23.24■■□□□ 1.31
VCPKMT-204ENST00000491402 NT5C1B-RDH14C9J2C7 533 aa23.23■■□□□ 1.31
VCPKMT-204ENST00000491402 M0QZQ0 153 aa23.23■■□□□ 1.31
VCPKMT-204ENST00000491402 TACC1O75410 805 aa23.23■■□□□ 1.31
VCPKMT-204ENST00000491402 DEKP35659 375 aaKnown RBP23.23■■□□□ 1.31
VCPKMT-204ENST00000491402 ASIC2Q16515 512 aa23.23■■□□□ 1.31
VCPKMT-204ENST00000491402 MEA1Q16626 185 aa23.23■■□□□ 1.31
VCPKMT-204ENST00000491402 TMEM173Q86WV6 379 aaPredicted RBP23.23■■□□□ 1.31
VCPKMT-204ENST00000491402 ADGRF2Q8IZF7 708 aa23.23■■□□□ 1.31
VCPKMT-204ENST00000491402 PDCL2Q8N4E4 241 aa23.23■■□□□ 1.31
VCPKMT-204ENST00000491402 KBTBD7Q8WVZ9 684 aa23.23■■□□□ 1.31
VCPKMT-204ENST00000491402 SUSD3Q96L08 255 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms