RNA–Protein interactions for RNA: ENST00000491334.1

CDK5RAP2-218, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 2

Gene CDK5RAP2, Length 546 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-218	ENST00000491334	DUSP4	Q13115	394 aa		21.03	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	STXBP5	Q5T5C0	1151 aa		21.03	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	GPR158	Q5T848	1215 aa		21.03	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	ERMN	Q8TAM6	284 aa		21.03	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	C18orf25	Q96B23	403 aa	Predicted RBP	21.03	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	EDEM2	Q9BV94	578 aa		21.03	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	POLD4	Q9HCU8	107 aa		21.03	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	PTPRH	Q9HD43	1115 aa		21.03	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	PDRG1	Q9NUG6	133 aa		21.03	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	CNTN3	Q9P232	1028 aa		21.03	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	ORC3	Q9UBD5	711 aa	Predicted RBP	21.03	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	LAMA1	P25391	3075 aa		21.02	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	GIPC1	O14908	333 aa		21.02	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	CAVIN2	O95810	425 aa		21.02	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	RPA1	P27694	616 aa		21.02	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	WEE1	P30291	646 aa		21.02	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	ZNF252P-AS1	Q0IIN9	211 aa		21.02	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	PKN3	Q6P5Z2	889 aa		21.02	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	21.02	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	PGLYRP2	Q96PD5	576 aa		21.02	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	MKNK1	Q9BUB5	465 aa		21.02	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	MRPL4	Q9BYD3	311 aa	Known RBP	21.02	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	ADAM33	Q9BZ11	813 aa		21.02	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	DNAJC25	Q9H1X3	360 aa		21.02	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	SPEG	Q15772	3267 aa		21.01	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	MCF2	P10911	925 aa		21.01	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	AMPD2	Q01433	879 aa		21.01	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	CACNB1	Q02641	598 aa	Predicted RBP	21.01	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	CREB5	Q02930	508 aa		21.01	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	GPR17	Q13304	367 aa		21.01	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	TMEM196	Q5HYL7	178 aa		21.01	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	SH3PXD2A	Q5TCZ1	1133 aa		21.01	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	TCEAL6	Q6IPX3	200 aa		21.01	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	GAREM2	Q75VX8	874 aa		21.01	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	USP37	Q86T82	979 aa		21.01	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	ITIH5	Q86UX2	942 aa		21.01	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	TCEAL3	Q969E4	200 aa		21.01	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	PSMG2	Q969U7	264 aa		21.01	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	DUSP15	Q9H1R2	295 aa	Predicted RBP	21.01	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	TMEM134	Q9H6X4	195 aa		21.01	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	WASF3	Q9UPY6	502 aa		21.01	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	PKD1L2	Q7Z442	2459 aa		21	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	OR6C75	A6NL08	312 aa		21	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	CCDC169	A6NNP5	214 aa		21	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	CEACAM1	P13688	526 aa		21	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	MUT	P22033	750 aa		21	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	GABRR2	P28476	465 aa		21	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	CENPP	Q6IPU0	288 aa		21	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	LRSAM1	Q6UWE0	723 aa		21	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	TASP1	Q9H6P5	420 aa		21	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	GKN1	Q9NS71	199 aa		21	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	SLC27A5	Q9Y2P5	690 aa		21	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	PHLPP2	Q6ZVD8	1323 aa		21	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	BCLAF3	A2AJT9	711 aa	Known RBP	20.99	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	SRRM3	A6NNA2	597 aa	Predicted RBP	20.99	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334		M0QZQ0	153 aa		20.99	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	TRDMT1	O14717	391 aa	Known RBP	20.99	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	EPB41L2	O43491	1005 aa	Known RBP	20.99	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	VNN2	O95498	520 aa		20.99	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	OR4Q2	P0C623	313 aa		20.99	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	SPINK2	P20155	84 aa		20.99	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	MCM2	P49736	904 aa		20.99	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	KARS	Q15046	597 aa	Known RBP	20.99	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	FSTL4	Q6MZW2	842 aa		20.99	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	TARS2	Q9BW92	718 aa	Known RBP	20.99	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	20.99	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	TMEM60	Q9H2L4	133 aa		20.99	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	CRISPLD1	Q9H336	500 aa		20.99	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	TIMM13	Q9Y5L4	95 aa	Predicted RBP	20.99	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	SOBP	A7XYQ1	873 aa		20.98	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	BTBD18	B2RXH4	712 aa		20.98	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	WNT7A	O00755	349 aa		20.98	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	PFKFB2	O60825	505 aa		20.98	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	DTNB	O60941	627 aa		20.98	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	CSRP1	P21291	193 aa	Known RBP	20.98	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	RUNX3	Q13761	415 aa		20.98	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	MPZL3	Q6UWV2	235 aa		20.98	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	EXOC4	Q96A65	974 aa		20.98	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	RBM19	Q9Y4C8	960 aa	Known RBP	20.98	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	CTDNEP1	O95476	244 aa		20.97	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	PRAMEF12	O95522	483 aa		20.97	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	MCM7	P33993	719 aa		20.97	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	NPTX2	P47972	431 aa		20.97	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	PEX3	P56589	373 aa		20.97	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	MYBPC2	Q14324	1141 aa		20.97	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	SLC10A6	Q3KNW5	377 aa		20.97	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	ARMCX5	Q6P1M9	558 aa		20.97	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	CENPQ	Q7L2Z9	268 aa	Predicted RBP	20.97	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	ATAD1	Q8NBU5	361 aa		20.97	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	GATA6	Q92908	595 aa		20.97	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	GCNA	Q96QF7	691 aa		20.97	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	FAM83C	Q9BQN1	747 aa		20.97	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	SCNM1	Q9BWG6	230 aa		20.97	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	BHMT2	Q9H2M3	363 aa		20.97	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	TMEM9B	Q9NQ34	198 aa		20.97	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	HSFX1	Q9UBD0	423 aa		20.97	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	ZMYM5	Q9UJ78	669 aa		20.97	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	20.97	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	DSP	P15924	2871 aa	Known RBP	20.96	■□□□□ 0.95
CDK5RAP2-218	ENST00000491334	KHNYN	O15037	678 aa	Known RBP	20.96	■□□□□ 0.95

Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms