RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 SOX7Q9BT81 388 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 ADI1Q9BV57 179 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 MLST8Q9BVC4 326 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 PITHD1Q9GZP4 211 aaPredicted RBP2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 SENP6Q9GZR1 1112 aaPredicted RBP2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 ZNF768Q9H5H4 540 aaKnown RBP2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 ZMAT4Q9H898 229 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 CASS4Q9NQ75 786 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 ECHDC1Q9NTX5 307 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 PDRG1Q9NUG6 133 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 HYPKQ9NX55 129 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 MIS18AQ9NYP9 233 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 C9orf78Q9NZ63 289 aaPredicted RBP2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 OGFRQ9NZT2 677 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 DBF4Q9UBU7 674 aaPredicted RBP2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 DPP7Q9UHL4 492 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 RCOR1Q9UKL0 485 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 DNM3Q9UQ16 869 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 PLAAQ9Y263 795 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 SNX14Q9Y5W7 946 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 EID1Q9Y6B2 187 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 COL3A1P02461 1466 aaPredicted RBP2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 ATP7BP35670 1465 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 NEO1Q92859 1461 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 CD163L1Q9NR16 1453 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 ARHGEF28Q8N1W1 1705 aaKnown RBP2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 ADGRB3O60242 1522 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 ZFYVE16Q7Z3T8 1539 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 ARHGEF40Q8TER5 1519 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 ELP1O95163 1332 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 ACEP12821 1306 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 RPTORQ8N122 1335 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 ERCC6L2Q5T890 1561 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 CFAP74Q9C0B2 1584 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 UGGT1Q9NYU2 1555 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 KIF20BQ96Q89 1820 aa2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 TMEM131LA2VDJ0 1609 aa2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 PIK3C2BO00750 1634 aa2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 ALKQ9UM73 1620 aa2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 YEATS2Q9ULM3 1422 aa2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 CLTCQ00610 1675 aaKnown RBP2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 PTPRMP28827 1452 aa2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 PNMA6EA0A0J9YXQ4 647 aa2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 ZAR1LA6NP61 321 aa2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 B5MCH6 92 aa2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 KIF2AO00139 706 aaPredicted RBP2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 MASP2O00187 686 aa2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 TRIM24O15164 1050 aa2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 CTIFO43310 598 aaKnown RBP2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 MTSS1O43312 755 aa2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 TGM5O43548 720 aa2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 PHF2O75151 1096 aa2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 ITGA10O75578 1167 aa2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 CFBP00751 764 aa2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 HMGB1P09429 215 aaKnown RBP2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 IFIT2P09913 472 aaKnown RBP2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 ITGAMP11215 1152 aa2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 DDX6P26196 483 aaKnown RBP eCLIP2.35□□□□□ -2.033e-6■□□□□ 10
SNRNP40-207ENST00000491106 CXCR5P32302 372 aa2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 PLA2G5P39877 138 aa2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 ADCYAP1R1P41586 468 aa2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 AK2P54819 239 aa2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 GYS2P54840 703 aa2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 WNT3AP56704 352 aa2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 RBM6P78332 1123 aaKnown RBP2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 KRT85P78386 507 aa2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 PURAQ00577 322 aaKnown RBP2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 DSG1Q02413 1049 aa2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 TERF2Q15554 542 aa2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 AMOTQ4VCS5 1084 aa2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 DCAF17Q5H9S7 520 aaPredicted RBP2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 ZBTB41Q5SVQ8 909 aa2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 AKNAD1Q5T1N1 836 aa2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 BEND3Q5T5X7 828 aa2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 ANKS6Q68DC2 871 aa2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 CWC27Q6UX04 472 aaKnown RBP2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 PLXDC1Q8IUK5 500 aa2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 DRC7Q8IY82 874 aa2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 PQLC1Q8N2U9 271 aa2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 SLC44A3Q8N4M1 653 aa2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 MSL3Q8N5Y2 521 aaKnown RBP2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 PPM1NQ8N819 430 aa2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 CPEB3Q8NE35 698 aaKnown RBP2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 NGDNQ8NEJ9 315 aaKnown RBP2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 CAGE1Q8TC20 777 aa2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 OTUD7AQ8TE49 926 aaPredicted RBP2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 SNX33Q8WV41 574 aa2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 DNAAF4Q8WXU2 420 aa2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 RIN2Q8WYP3 895 aaPredicted RBP2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 IP6K1Q92551 441 aa2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 PAWRQ96IZ0 340 aaKnown RBP2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 PKNOX2Q96KN3 472 aa2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 AGAP2Q99490 1192 aa2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 LLPHQ9BRT6 129 aaKnown RBP2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 FUCA2Q9BTY2 467 aa2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 SLC46A2Q9BY10 475 aa2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 HAPLN2Q9GZV7 340 aa2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 LSG1Q9H089 658 aaKnown RBP2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 NAT10Q9H0A0 1025 aaKnown RBP2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 QRSL1Q9H0R6 528 aaKnown RBP2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms