RNA–Protein interactions for RNA: ENST00000491052.5

LIMK1-207, Transcript of LIM domain kinase 1, humanhuman

TSL 4

Gene LIMK1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-207ENST00000491052 TRPC3Q13507 836 aa13.81□□□□□ -0.2
LIMK1-207ENST00000491052 RARS2Q5T160 578 aaKnown RBP13.81□□□□□ -0.2
LIMK1-207ENST00000491052 RSPO2Q6UXX9 243 aaPredicted RBP13.81□□□□□ -0.2
LIMK1-207ENST00000491052 METTL23Q86XA0 190 aa13.81□□□□□ -0.2
LIMK1-207ENST00000491052 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.81□□□□□ -0.2
LIMK1-207ENST00000491052 CXorf38Q8TB03 319 aa13.81□□□□□ -0.2
LIMK1-207ENST00000491052 MKNK1Q9BUB5 465 aa13.81□□□□□ -0.2
LIMK1-207ENST00000491052 MMRN2Q9H8L6 949 aa13.81□□□□□ -0.2
LIMK1-207ENST00000491052 FBXL5Q9UKA1 691 aa13.81□□□□□ -0.2
LIMK1-207ENST00000491052 DSEQ9UL01 958 aa13.81□□□□□ -0.2
LIMK1-207ENST00000491052 SNX9Q9Y5X1 595 aa13.81□□□□□ -0.2
LIMK1-207ENST00000491052 ZNF638Q14966 1978 aaKnown RBP13.8□□□□□ -0.2
LIMK1-207ENST00000491052 MYO10Q9HD67 2058 aa13.8□□□□□ -0.2
LIMK1-207ENST00000491052 SLC16A3O15427 465 aaKnown RBP13.8□□□□□ -0.2
LIMK1-207ENST00000491052 CPB1P15086 417 aa13.8□□□□□ -0.2
LIMK1-207ENST00000491052 HOXB8P17481 243 aaPredicted RBP13.8□□□□□ -0.2
LIMK1-207ENST00000491052 CLDN10P78369 228 aa13.8□□□□□ -0.2
LIMK1-207ENST00000491052 ROR1Q01973 937 aa13.8□□□□□ -0.2
LIMK1-207ENST00000491052 RAB33AQ14088 237 aa13.8□□□□□ -0.2
LIMK1-207ENST00000491052 MRPL58Q14197 206 aaKnown RBP13.8□□□□□ -0.2
LIMK1-207ENST00000491052 DCAF17Q5H9S7 520 aaPredicted RBP13.8□□□□□ -0.2
LIMK1-207ENST00000491052 TJAP1Q5JTD0 557 aa13.8□□□□□ -0.2
LIMK1-207ENST00000491052 LIN9Q5TKA1 542 aa13.8□□□□□ -0.2
LIMK1-207ENST00000491052 TDRD10Q5VZ19 366 aaKnown RBP13.8□□□□□ -0.2
LIMK1-207ENST00000491052 WSCD1Q658N2 575 aa13.8□□□□□ -0.2
LIMK1-207ENST00000491052 SLC8B1Q6J4K2 584 aa13.8□□□□□ -0.2
LIMK1-207ENST00000491052 TTI2Q6NXR4 508 aa13.8□□□□□ -0.2
LIMK1-207ENST00000491052 SYCE2Q6PIF2 218 aa13.8□□□□□ -0.2
LIMK1-207ENST00000491052 ZC3H3Q8IXZ2 948 aaKnown RBP13.8□□□□□ -0.2
LIMK1-207ENST00000491052 C12orf76Q8N812 135 aaPredicted RBP13.8□□□□□ -0.2
LIMK1-207ENST00000491052 SMRP1Q8NCR6 262 aa13.8□□□□□ -0.2
LIMK1-207ENST00000491052 KREMEN2Q8NCW0 462 aa13.8□□□□□ -0.2
LIMK1-207ENST00000491052 BORCS6Q96GS4 357 aa13.8□□□□□ -0.2
LIMK1-207ENST00000491052 SFXN1Q9H9B4 322 aa13.8□□□□□ -0.2
LIMK1-207ENST00000491052 DPP7Q9UHL4 492 aa13.8□□□□□ -0.2
LIMK1-207ENST00000491052 FAM50BQ9Y247 325 aa13.8□□□□□ -0.2
LIMK1-207ENST00000491052 DENND4CQ5VZ89 1909 aa13.8□□□□□ -0.2
LIMK1-207ENST00000491052 NOTCH4Q99466 2003 aa13.8□□□□□ -0.2
LIMK1-207ENST00000491052 GRXCR2A6NFK2 248 aa13.79□□□□□ -0.2
LIMK1-207ENST00000491052 MBTPS2O43462 519 aa13.79□□□□□ -0.2
LIMK1-207ENST00000491052 HUS1O60921 280 aa13.79□□□□□ -0.2
LIMK1-207ENST00000491052 OAZ2O95190 189 aa13.79□□□□□ -0.2
LIMK1-207ENST00000491052 CYP11A1P05108 521 aa13.79□□□□□ -0.2
LIMK1-207ENST00000491052 IL9P15248 144 aa13.79□□□□□ -0.2
LIMK1-207ENST00000491052 PIK3CAP42336 1068 aa13.79□□□□□ -0.2
LIMK1-207ENST00000491052 GCLMP48507 274 aa13.79□□□□□ -0.2
LIMK1-207ENST00000491052 MYL6P60660 151 aa13.79□□□□□ -0.2
LIMK1-207ENST00000491052 NCOA4Q13772 614 aa13.79□□□□□ -0.2
LIMK1-207ENST00000491052 PUS10Q3MIT2 529 aaKnown RBP13.79□□□□□ -0.2
LIMK1-207ENST00000491052 DPCR1Q3MIW9 517 aa13.79□□□□□ -0.2
LIMK1-207ENST00000491052 CCDC40Q4G0X9 1142 aa13.79□□□□□ -0.2
LIMK1-207ENST00000491052 C1orf220Q5T0J3 134 aa13.79□□□□□ -0.2
LIMK1-207ENST00000491052 TCERG1LQ5VWI1 586 aa13.79□□□□□ -0.2
LIMK1-207ENST00000491052 CES5AQ6NT32 575 aa13.79□□□□□ -0.2
LIMK1-207ENST00000491052 LILRA6Q6PI73 481 aa13.79□□□□□ -0.2
LIMK1-207ENST00000491052 TMC5Q6UXY8 1006 aa13.79□□□□□ -0.2
LIMK1-207ENST00000491052 THEM5Q8N1Q8 247 aa13.79□□□□□ -0.2
LIMK1-207ENST00000491052 MLKLQ8NB16 471 aa13.79□□□□□ -0.2
LIMK1-207ENST00000491052 CEP63Q96MT8 703 aa13.79□□□□□ -0.2
LIMK1-207ENST00000491052 DUSP9Q99956 384 aaKnown RBP13.79□□□□□ -0.2
LIMK1-207ENST00000491052 PLEKHA4Q9H4M7 779 aa13.79□□□□□ -0.2
LIMK1-207ENST00000491052 FBXW11Q9UKB1 542 aa13.79□□□□□ -0.2
LIMK1-207ENST00000491052 L1RE1Q9UN81 338 aa13.79□□□□□ -0.2
LIMK1-207ENST00000491052 USP15Q9Y4E8 981 aaPredicted RBP13.79□□□□□ -0.2
LIMK1-207ENST00000491052 OBSL1O75147 1896 aa13.78□□□□□ -0.2
LIMK1-207ENST00000491052 GREB1Q4ZG55 1949 aa13.78□□□□□ -0.2
LIMK1-207ENST00000491052 WDR27A2RRH5 827 aa13.78□□□□□ -0.2
LIMK1-207ENST00000491052 OR6C75A6NL08 312 aa13.78□□□□□ -0.2
LIMK1-207ENST00000491052 IKBKBO14920 756 aa13.78□□□□□ -0.2
LIMK1-207ENST00000491052 TBC1D4O60343 1298 aa13.78□□□□□ -0.2
LIMK1-207ENST00000491052 RFPL2O75678 378 aa13.78□□□□□ -0.2
LIMK1-207ENST00000491052 C1RP00736 705 aa13.78□□□□□ -0.2
LIMK1-207ENST00000491052 CST3P01034 146 aaPredicted RBP13.78□□□□□ -0.2
LIMK1-207ENST00000491052 C4BPAP04003 597 aaKnown RBP13.78□□□□□ -0.2
LIMK1-207ENST00000491052 C8AP07357 584 aa13.78□□□□□ -0.2
LIMK1-207ENST00000491052 OR4Q2P0C623 313 aa13.78□□□□□ -0.2
LIMK1-207ENST00000491052 NLRP12P59046 1061 aa13.78□□□□□ -0.2
LIMK1-207ENST00000491052 TNNC1P63316 161 aa13.78□□□□□ -0.2
LIMK1-207ENST00000491052 PPP3CAQ08209 521 aa13.78□□□□□ -0.2
LIMK1-207ENST00000491052 ZNF699Q32M78 642 aa13.78□□□□□ -0.2
LIMK1-207ENST00000491052 ZACNQ401N2 412 aa13.78□□□□□ -0.2
LIMK1-207ENST00000491052 CCDC183Q5T5S1 534 aa13.78□□□□□ -0.2
LIMK1-207ENST00000491052 FOXR2Q6PJQ5 311 aa13.78□□□□□ -0.2
LIMK1-207ENST00000491052 SV2AQ7L0J3 742 aa13.78□□□□□ -0.2
LIMK1-207ENST00000491052 ADGRF2Q8IZF7 708 aa13.78□□□□□ -0.2
LIMK1-207ENST00000491052 PDCL2Q8N4E4 241 aa13.78□□□□□ -0.2
LIMK1-207ENST00000491052 SLC7A14Q8TBB6 771 aa13.78□□□□□ -0.2
LIMK1-207ENST00000491052 HDAC7Q8WUI4 952 aa13.78□□□□□ -0.2
LIMK1-207ENST00000491052 SYAP1Q96A49 352 aaPredicted RBP13.78□□□□□ -0.2
LIMK1-207ENST00000491052 MMS19Q96T76 1030 aa13.78□□□□□ -0.2
LIMK1-207ENST00000491052 OXCT2Q9BYC2 517 aaPredicted RBP13.78□□□□□ -0.2
LIMK1-207ENST00000491052 S1PR5Q9H228 398 aa13.78□□□□□ -0.2
LIMK1-207ENST00000491052 GDAP2Q9NXN4 497 aa13.78□□□□□ -0.2
LIMK1-207ENST00000491052 ARMCX3Q9UH62 379 aaPredicted RBP13.78□□□□□ -0.2
LIMK1-207ENST00000491052 DACH1Q9UI36 760 aa13.78□□□□□ -0.2
LIMK1-207ENST00000491052 RWDD2AQ9UIY3 292 aa13.78□□□□□ -0.2
LIMK1-207ENST00000491052 CDH22Q9UJ99 828 aa13.78□□□□□ -0.2
LIMK1-207ENST00000491052 PRRG1O14668 218 aa13.77□□□□□ -0.21
LIMK1-207ENST00000491052 STX10O60499 249 aa13.77□□□□□ -0.21
LIMK1-207ENST00000491052 VNN1O95497 513 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms