RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 PTPRSQ13332 1948 aa11.72□□□□□ -0.53
VARS2-210ENST00000490699 H7C4K7 107 aa11.72□□□□□ -0.53
VARS2-210ENST00000490699 SYN3O14994 580 aa11.72□□□□□ -0.53
VARS2-210ENST00000490699 PTMAP06454 111 aaKnown RBP11.72□□□□□ -0.53
VARS2-210ENST00000490699 FAM163BP0C2L3 166 aa11.72□□□□□ -0.53
VARS2-210ENST00000490699 KRT5P13647 590 aa11.72□□□□□ -0.53
VARS2-210ENST00000490699 UCHL3P15374 230 aa11.72□□□□□ -0.53
VARS2-210ENST00000490699 USP8P40818 1118 aa11.72□□□□□ -0.53
VARS2-210ENST00000490699 LHX1P48742 406 aa11.72□□□□□ -0.53
VARS2-210ENST00000490699 RABGGTBP53611 331 aa11.72□□□□□ -0.53
VARS2-210ENST00000490699 POLR2FP61218 127 aaKnown RBP11.72□□□□□ -0.53
VARS2-210ENST00000490699 CREMQ03060 361 aa11.72□□□□□ -0.53
VARS2-210ENST00000490699 ARHGAP44Q17R89 818 aa11.72□□□□□ -0.53
VARS2-210ENST00000490699 KLHDC7AQ5VTJ3 777 aa11.72□□□□□ -0.53
VARS2-210ENST00000490699 PPP2R2DQ66LE6 453 aa11.72□□□□□ -0.53
VARS2-210ENST00000490699 FUT10Q6P4F1 479 aa11.72□□□□□ -0.53
VARS2-210ENST00000490699 ADGRF2Q8IZF7 708 aa11.72□□□□□ -0.53
VARS2-210ENST00000490699 FAM84AQ96KN4 292 aa11.72□□□□□ -0.53
VARS2-210ENST00000490699 SUSD3Q96L08 255 aa11.72□□□□□ -0.53
VARS2-210ENST00000490699 SENP8Q96LD8 212 aa11.72□□□□□ -0.53
VARS2-210ENST00000490699 TGS1Q96RS0 853 aaKnown RBP11.72□□□□□ -0.53
VARS2-210ENST00000490699 C11orf84Q9BUA3 381 aaPredicted RBP11.72□□□□□ -0.53
VARS2-210ENST00000490699 OXCT2Q9BYC2 517 aaPredicted RBP11.72□□□□□ -0.53
VARS2-210ENST00000490699 XYLT2Q9H1B5 865 aa11.72□□□□□ -0.53
VARS2-210ENST00000490699 CWH43Q9H720 699 aa11.72□□□□□ -0.53
VARS2-210ENST00000490699 SLC28A3Q9HAS3 691 aa11.72□□□□□ -0.53
VARS2-210ENST00000490699 IMPACTQ9P2X3 320 aa11.72□□□□□ -0.53
VARS2-210ENST00000490699 DNAJC12Q9UKB3 198 aa11.72□□□□□ -0.53
VARS2-210ENST00000490699 MYO6Q9UM54 1294 aa11.72□□□□□ -0.53
VARS2-210ENST00000490699 PCDHB8Q9UN66 801 aa11.72□□□□□ -0.53
VARS2-210ENST00000490699 SIK3Q9Y2K2 1263 aa11.72□□□□□ -0.53
VARS2-210ENST00000490699 LUC7L2Q9Y383 392 aaKnown RBP11.72□□□□□ -0.53
VARS2-210ENST00000490699 MKI67P46013 3256 aaKnown RBP11.72□□□□□ -0.53
VARS2-210ENST00000490699 A0A1W2PQJ5 194 aa11.71□□□□□ -0.53
VARS2-210ENST00000490699 NT5C1B-RDH14C9J2C7 533 aa11.71□□□□□ -0.53
VARS2-210ENST00000490699 PPEF2O14830 753 aa11.71□□□□□ -0.53
VARS2-210ENST00000490699 URODP06132 367 aa11.71□□□□□ -0.53
VARS2-210ENST00000490699 RB1P06400 928 aa11.71□□□□□ -0.53
VARS2-210ENST00000490699 CA3P07451 260 aa11.71□□□□□ -0.53
VARS2-210ENST00000490699 TYMPP19971 482 aa11.71□□□□□ -0.53
VARS2-210ENST00000490699 PCSK1P29120 753 aa11.71□□□□□ -0.53
VARS2-210ENST00000490699 CA8P35219 290 aa11.71□□□□□ -0.53
VARS2-210ENST00000490699 STAT1P42224 750 aa11.71□□□□□ -0.53
VARS2-210ENST00000490699 GSDMDP57764 484 aa11.71□□□□□ -0.53
VARS2-210ENST00000490699 BPIFB4P59827 614 aa11.71□□□□□ -0.53
VARS2-210ENST00000490699 SMAD3P84022 425 aaKnown RBP11.71□□□□□ -0.53
VARS2-210ENST00000490699 TSPY1Q01534 308 aa11.71□□□□□ -0.53
VARS2-210ENST00000490699 YWHAHQ04917 246 aaPredicted RBP11.71□□□□□ -0.53
VARS2-210ENST00000490699 KCNMA1Q12791 1236 aa11.71□□□□□ -0.53
VARS2-210ENST00000490699 USP41Q3LFD5 358 aa11.71□□□□□ -0.53
VARS2-210ENST00000490699 FAM171A1Q5VUB5 890 aa11.71□□□□□ -0.53
VARS2-210ENST00000490699 SPOPLQ6IQ16 392 aa11.71□□□□□ -0.53
VARS2-210ENST00000490699 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.71□□□□□ -0.53
VARS2-210ENST00000490699 RRAGAQ7L523 313 aa11.71□□□□□ -0.53
VARS2-210ENST00000490699 CEP57Q86XR8 500 aa11.71□□□□□ -0.53
VARS2-210ENST00000490699 SLC39A11Q8N1S5 342 aa11.71□□□□□ -0.53
VARS2-210ENST00000490699 OR6B3Q8NGW1 331 aa11.71□□□□□ -0.53
VARS2-210ENST00000490699 RABGGTAQ92696 567 aa11.71□□□□□ -0.53
VARS2-210ENST00000490699 CLP1Q92989 425 aaKnown RBP11.71□□□□□ -0.53
VARS2-210ENST00000490699 IGSF21Q96ID5 467 aa11.71□□□□□ -0.53
VARS2-210ENST00000490699 TNIP3Q96KP6 325 aa11.71□□□□□ -0.53
VARS2-210ENST00000490699 PAAF1Q9BRP4 392 aa11.71□□□□□ -0.53
VARS2-210ENST00000490699 STK33Q9BYT3 514 aa11.71□□□□□ -0.53
VARS2-210ENST00000490699 NLRC4Q9NPP4 1024 aa11.71□□□□□ -0.53
VARS2-210ENST00000490699 CACNG4Q9UBN1 327 aa11.71□□□□□ -0.53
VARS2-210ENST00000490699 PCDHB4Q9Y5E5 795 aa11.71□□□□□ -0.53
VARS2-210ENST00000490699 LINC01553A4QN01 128 aa11.7□□□□□ -0.54
VARS2-210ENST00000490699 A8MXQ7 604 aa11.7□□□□□ -0.54
VARS2-210ENST00000490699 AKR1B15C9JRZ8 316 aaPredicted RBP11.7□□□□□ -0.54
VARS2-210ENST00000490699 M0QZQ0 153 aa11.7□□□□□ -0.54
VARS2-210ENST00000490699 LRRN2O75325 713 aa11.7□□□□□ -0.54
VARS2-210ENST00000490699 TACC1O75410 805 aa11.7□□□□□ -0.54
VARS2-210ENST00000490699 FGF18O76093 207 aa11.7□□□□□ -0.54
VARS2-210ENST00000490699 CD58P19256 250 aa11.7□□□□□ -0.54
VARS2-210ENST00000490699 BMPR1AP36894 532 aa11.7□□□□□ -0.54
VARS2-210ENST00000490699 PBX1P40424 430 aa11.7□□□□□ -0.54
VARS2-210ENST00000490699 PBX3P40426 434 aa11.7□□□□□ -0.54
VARS2-210ENST00000490699 ASPAP45381 313 aa11.7□□□□□ -0.54
VARS2-210ENST00000490699 AARSP49588 968 aaKnown RBP eCLIP11.7□□□□□ -0.54
VARS2-210ENST00000490699 ZBED6P86452 979 aa11.7□□□□□ -0.54
VARS2-210ENST00000490699 UBE3AQ05086 875 aa11.7□□□□□ -0.54
VARS2-210ENST00000490699 DRAP1Q14919 205 aaPredicted RBP11.7□□□□□ -0.54
VARS2-210ENST00000490699 TIGD5Q53EQ6 642 aa11.7□□□□□ -0.54
VARS2-210ENST00000490699 OVOS1Q6IE37 1185 aa11.7□□□□□ -0.54
VARS2-210ENST00000490699 IQCEQ6IPM2 695 aa11.7□□□□□ -0.54
VARS2-210ENST00000490699 ZNF280DQ6N043 979 aa11.7□□□□□ -0.54
VARS2-210ENST00000490699 PHLDB3Q6NSJ2 640 aa11.7□□□□□ -0.54
VARS2-210ENST00000490699 ANKS3Q6ZW76 656 aa11.7□□□□□ -0.54
VARS2-210ENST00000490699 VPS36Q86VN1 386 aa11.7□□□□□ -0.54
VARS2-210ENST00000490699 UNC93AQ86WB7 457 aa11.7□□□□□ -0.54
VARS2-210ENST00000490699 ARHGEF19Q8IW93 802 aa11.7□□□□□ -0.54
VARS2-210ENST00000490699 FBXO22Q8NEZ5 403 aa11.7□□□□□ -0.54
VARS2-210ENST00000490699 LMO3Q8TAP4 145 aa11.7□□□□□ -0.54
VARS2-210ENST00000490699 CXorf38Q8TB03 319 aa11.7□□□□□ -0.54
VARS2-210ENST00000490699 CPLX3Q8WVH0 158 aa11.7□□□□□ -0.54
VARS2-210ENST00000490699 TATDN2Q93075 761 aa11.7□□□□□ -0.54
VARS2-210ENST00000490699 TTPALQ9BTX7 342 aa11.7□□□□□ -0.54
VARS2-210ENST00000490699 NT5C1AQ9BXI3 368 aa11.7□□□□□ -0.54
VARS2-210ENST00000490699 BCO2Q9BYV7 579 aa11.7□□□□□ -0.54
VARS2-210ENST00000490699 GANQ9H2C0 597 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms