RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 RSPO4Q2I0M5 234 aaPredicted RBP16.92■□□□□ 0.3
COL2A1-207ENST00000490609 DGLUCYQ7Z3D6 616 aa16.92■□□□□ 0.3
COL2A1-207ENST00000490609 KCTD17Q8N5Z5 321 aa16.92■□□□□ 0.3
COL2A1-207ENST00000490609 ATAD1Q8NBU5 361 aa16.92■□□□□ 0.3
COL2A1-207ENST00000490609 ATRIPQ8WXE1 791 aa16.92■□□□□ 0.3
COL2A1-207ENST00000490609 IRF7Q92985 503 aa16.92■□□□□ 0.3
COL2A1-207ENST00000490609 BORCS6Q96GS4 357 aa16.92■□□□□ 0.3
COL2A1-207ENST00000490609 IKZF4Q9H2S9 585 aa16.92■□□□□ 0.3
COL2A1-207ENST00000490609 LMAN1LQ9HAT1 526 aa16.92■□□□□ 0.3
COL2A1-207ENST00000490609 KCND2Q9NZV8 630 aa16.92■□□□□ 0.3
COL2A1-207ENST00000490609 ANAPC1Q9H1A4 1944 aa16.92■□□□□ 0.3
COL2A1-207ENST00000490609 A0A1W2PRU2 124 aa16.91■□□□□ 0.3
COL2A1-207ENST00000490609 MTMR11A4FU01 709 aa16.91■□□□□ 0.3
COL2A1-207ENST00000490609 TISP43B9A030 160 aa16.91■□□□□ 0.3
COL2A1-207ENST00000490609 ANKRD63C9JTQ0 380 aa16.91■□□□□ 0.3
COL2A1-207ENST00000490609 PIRO00625 290 aa16.91■□□□□ 0.3
COL2A1-207ENST00000490609 CPB1P15086 417 aa16.91■□□□□ 0.3
COL2A1-207ENST00000490609 CDR1P51861 262 aa16.91■□□□□ 0.3
COL2A1-207ENST00000490609 DMWDQ09019 674 aa16.91■□□□□ 0.3
COL2A1-207ENST00000490609 FCHO2Q0JRZ9 810 aa16.91■□□□□ 0.3
COL2A1-207ENST00000490609 SPATA1Q5VX52 437 aa16.91■□□□□ 0.3
COL2A1-207ENST00000490609 ARL6IP4Q66PJ3 421 aaKnown RBP16.91■□□□□ 0.3
COL2A1-207ENST00000490609 SCARA3Q6AZY7 606 aa16.91■□□□□ 0.3
COL2A1-207ENST00000490609 MCTP1Q6DN14 999 aa16.91■□□□□ 0.3
COL2A1-207ENST00000490609 IQCEQ6IPM2 695 aa16.91■□□□□ 0.3
COL2A1-207ENST00000490609 TXNDC11Q6PKC3 985 aa16.91■□□□□ 0.3
COL2A1-207ENST00000490609 OR10T2Q8NGX3 314 aa16.91■□□□□ 0.3
COL2A1-207ENST00000490609 FAM3CQ92520 227 aa16.91■□□□□ 0.3
COL2A1-207ENST00000490609 TMX3Q96JJ7 454 aa16.91■□□□□ 0.3
COL2A1-207ENST00000490609 ASAH2Q9NR71 780 aa16.91■□□□□ 0.3
COL2A1-207ENST00000490609 CPSF3Q9UKF6 684 aaKnown RBP16.91■□□□□ 0.3
COL2A1-207ENST00000490609 UBQLN1Q9UMX0 589 aaKnown RBP16.91■□□□□ 0.3
COL2A1-207ENST00000490609 SMG5Q9UPR3 1016 aaKnown RBP16.91■□□□□ 0.3
COL2A1-207ENST00000490609 PIAS3Q9Y6X2 628 aa16.91■□□□□ 0.3
COL2A1-207ENST00000490609 GREB1Q4ZG55 1949 aa16.91■□□□□ 0.3
COL2A1-207ENST00000490609 MAP1BP46821 2468 aaKnown RBP16.9■□□□□ 0.3
COL2A1-207ENST00000490609 ANO9A1A5B4 782 aa16.9■□□□□ 0.3
COL2A1-207ENST00000490609 MAN2B1O00754 1011 aa16.9■□□□□ 0.3
COL2A1-207ENST00000490609 OGTO15294 1046 aa16.9■□□□□ 0.3
COL2A1-207ENST00000490609 NCAM2O15394 837 aa16.9■□□□□ 0.3
COL2A1-207ENST00000490609 TYMPP19971 482 aa16.9■□□□□ 0.3
COL2A1-207ENST00000490609 CCNE1P24864 410 aa16.9■□□□□ 0.3
COL2A1-207ENST00000490609 GJB2P29033 226 aa16.9■□□□□ 0.3
COL2A1-207ENST00000490609 MARCKSP29966 332 aaPredicted RBP16.9■□□□□ 0.3
COL2A1-207ENST00000490609 SOX9P48436 509 aa16.9■□□□□ 0.3
COL2A1-207ENST00000490609 JADE1Q6IE81 842 aa16.9■□□□□ 0.3
COL2A1-207ENST00000490609 DEPDC1BQ8WUY9 529 aa16.9■□□□□ 0.3
COL2A1-207ENST00000490609 SENP8Q96LD8 212 aa16.9■□□□□ 0.3
COL2A1-207ENST00000490609 HINFPQ9BQA5 517 aa16.9■□□□□ 0.3
COL2A1-207ENST00000490609 KCNG1Q9UIX4 513 aa16.9■□□□□ 0.3
COL2A1-207ENST00000490609 MRPS17Q9Y2R5 130 aaKnown RBP16.9■□□□□ 0.3
COL2A1-207ENST00000490609 MYO16Q9Y6X6 1858 aa16.9■□□□□ 0.3
COL2A1-207ENST00000490609 NFICP08651 508 aa16.89■□□□□ 0.29
COL2A1-207ENST00000490609 NMT1P30419 496 aaKnown RBP16.89■□□□□ 0.29
COL2A1-207ENST00000490609 ATXN1P54253 815 aaKnown RBP16.89■□□□□ 0.29
COL2A1-207ENST00000490609 MLLT6P55198 1093 aaPredicted RBP16.89■□□□□ 0.29
COL2A1-207ENST00000490609 GTF2BQ00403 316 aa16.89■□□□□ 0.29
COL2A1-207ENST00000490609 SATB1Q01826 763 aa16.89■□□□□ 0.29
COL2A1-207ENST00000490609 MYBPC2Q14324 1141 aa16.89■□□□□ 0.29
COL2A1-207ENST00000490609 MCM6Q14566 821 aa16.89■□□□□ 0.29
COL2A1-207ENST00000490609 C9orf57Q5W0N0 161 aa16.89■□□□□ 0.29
COL2A1-207ENST00000490609 OVOS1Q6IE37 1185 aa16.89■□□□□ 0.29
COL2A1-207ENST00000490609 DNAJB7Q7Z6W7 309 aaPredicted RBP16.89■□□□□ 0.29
COL2A1-207ENST00000490609 LRRTM3Q86VH5 581 aa16.89■□□□□ 0.29
COL2A1-207ENST00000490609 ARID3BQ8IVW6 561 aaPredicted RBP16.89■□□□□ 0.29
COL2A1-207ENST00000490609 ELMOD1Q8N336 334 aa16.89■□□□□ 0.29
COL2A1-207ENST00000490609 LEMD2Q8NC56 503 aa16.89■□□□□ 0.29
COL2A1-207ENST00000490609 IL21Q9HBE4 155 aa16.89■□□□□ 0.29
COL2A1-207ENST00000490609 RBM12Q9NTZ6 932 aaKnown RBP16.89■□□□□ 0.29
COL2A1-207ENST00000490609 LARSQ9P2J5 1176 aaKnown RBP16.89■□□□□ 0.29
COL2A1-207ENST00000490609 ODF2LQ9ULJ1 636 aa16.89■□□□□ 0.29
COL2A1-207ENST00000490609 FRYQ5TBA9 3013 aa16.89■□□□□ 0.29
COL2A1-207ENST00000490609 OR6C75A6NL08 312 aa16.88■□□□□ 0.29
COL2A1-207ENST00000490609 K7ESF4 209 aa16.88■□□□□ 0.29
COL2A1-207ENST00000490609 ZNF263O14978 683 aa16.88■□□□□ 0.29
COL2A1-207ENST00000490609 CHADO15335 359 aa16.88■□□□□ 0.29
COL2A1-207ENST00000490609 CYP11A1P05108 521 aa16.88■□□□□ 0.29
COL2A1-207ENST00000490609 WNT7BP56706 349 aa16.88■□□□□ 0.29
COL2A1-207ENST00000490609 PPP2R3AQ06190 1150 aa16.88■□□□□ 0.29
COL2A1-207ENST00000490609 ZC2HC1CQ53FD0 456 aaPredicted RBP16.88■□□□□ 0.29
COL2A1-207ENST00000490609 CRELD2Q6UXH1 353 aaPredicted RBP16.88■□□□□ 0.29
COL2A1-207ENST00000490609 USP49Q70CQ1 688 aa16.88■□□□□ 0.29
COL2A1-207ENST00000490609 GPBP1Q86WP2 473 aa16.88■□□□□ 0.29
COL2A1-207ENST00000490609 PSMG2Q969U7 264 aa16.88■□□□□ 0.29
COL2A1-207ENST00000490609 CHFRQ96EP1 664 aa16.88■□□□□ 0.29
COL2A1-207ENST00000490609 ZFYVE19Q96K21 471 aa16.88■□□□□ 0.29
COL2A1-207ENST00000490609 OXCT2Q9BYC2 517 aaPredicted RBP16.88■□□□□ 0.29
COL2A1-207ENST00000490609 FAM126AQ9BYI3 521 aaPredicted RBP16.88■□□□□ 0.29
COL2A1-207ENST00000490609 STYXL1Q9Y6J8 313 aa16.88■□□□□ 0.29
COL2A1-207ENST00000490609 CFAP47Q6ZTR5 3102 aa16.87■□□□□ 0.29
COL2A1-207ENST00000490609 HNRNPDLO14979 420 aaKnown RBP16.87■□□□□ 0.29
COL2A1-207ENST00000490609 HRO43593 1189 aa16.87■□□□□ 0.29
COL2A1-207ENST00000490609 PRAMEF12O95522 483 aa16.87■□□□□ 0.29
COL2A1-207ENST00000490609 ATF6P18850 670 aa16.87■□□□□ 0.29
COL2A1-207ENST00000490609 PLCG1P19174 1290 aa16.87■□□□□ 0.29
COL2A1-207ENST00000490609 MATR3P43243 847 aaKnown RBP eCLIP16.87■□□□□ 0.29
COL2A1-207ENST00000490609 ACOT2P49753 483 aa16.87■□□□□ 0.29
COL2A1-207ENST00000490609 LIG4P49917 911 aa16.87■□□□□ 0.29
COL2A1-207ENST00000490609 DHX8Q14562 1220 aaKnown RBP16.87■□□□□ 0.29
COL2A1-207ENST00000490609 KARSQ15046 597 aaKnown RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms