RNA–Protein interactions for RNA: ENST00000490140.1

FDPS-215, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-215ENST00000490140 HYIQ5T013 277 aa12.8□□□□□ -0.36
FDPS-215ENST00000490140 ERICH6BQ5W0A0 696 aa12.8□□□□□ -0.36
FDPS-215ENST00000490140 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.8□□□□□ -0.36
FDPS-215ENST00000490140 SYT2Q8N9I0 419 aaPredicted RBP12.8□□□□□ -0.36
FDPS-215ENST00000490140 DDX1Q92499 740 aaKnown RBP12.8□□□□□ -0.36
FDPS-215ENST00000490140 AK8Q96MA6 479 aa12.8□□□□□ -0.36
FDPS-215ENST00000490140 RPF1Q9H9Y2 349 aaKnown RBP12.8□□□□□ -0.36
FDPS-215ENST00000490140 THG1LQ9NWX6 298 aaKnown RBP12.8□□□□□ -0.36
FDPS-215ENST00000490140 OBP2AQ9NY56 170 aa12.8□□□□□ -0.36
FDPS-215ENST00000490140 DSEQ9UL01 958 aa12.8□□□□□ -0.36
FDPS-215ENST00000490140 NUP210Q8TEM1 1887 aaPredicted RBP12.79□□□□□ -0.36
FDPS-215ENST00000490140 A0A1W2PRU2 124 aa12.79□□□□□ -0.36
FDPS-215ENST00000490140 TTC26A0AVF1 554 aa12.79□□□□□ -0.36
FDPS-215ENST00000490140 PP2D1A8MPX8 630 aa12.79□□□□□ -0.36
FDPS-215ENST00000490140 CDC25CP30307 473 aa12.79□□□□□ -0.36
FDPS-215ENST00000490140 VIPR2P41587 438 aa12.79□□□□□ -0.36
FDPS-215ENST00000490140 TUFMP49411 452 aaKnown RBP12.79□□□□□ -0.36
FDPS-215ENST00000490140 AARSP49588 968 aaKnown RBP eCLIP12.79□□□□□ -0.36
FDPS-215ENST00000490140 ATXN1P54253 815 aaKnown RBP12.79□□□□□ -0.36
FDPS-215ENST00000490140 ATP2C1P98194 919 aaPredicted RBP12.79□□□□□ -0.36
FDPS-215ENST00000490140 SMARCB1Q12824 385 aa12.79□□□□□ -0.36
FDPS-215ENST00000490140 FZD5Q13467 585 aa12.79□□□□□ -0.36
FDPS-215ENST00000490140 SIM2Q14190 667 aaPredicted RBP12.79□□□□□ -0.36
FDPS-215ENST00000490140 TAF12Q16514 161 aa12.79□□□□□ -0.36
FDPS-215ENST00000490140 ARL6IP4Q66PJ3 421 aaKnown RBP12.79□□□□□ -0.36
FDPS-215ENST00000490140 MCTP1Q6DN14 999 aa12.79□□□□□ -0.36
FDPS-215ENST00000490140 HS6ST3Q8IZP7 471 aa12.79□□□□□ -0.36
FDPS-215ENST00000490140 ZNF687Q8N1G0 1237 aa12.79□□□□□ -0.36
FDPS-215ENST00000490140 SYNPOQ8N3V7 929 aa12.79□□□□□ -0.36
FDPS-215ENST00000490140 SHKBP1Q8TBC3 707 aa12.79□□□□□ -0.36
FDPS-215ENST00000490140 KCNN1Q92952 543 aa12.79□□□□□ -0.36
FDPS-215ENST00000490140 PSMG2Q969U7 264 aa12.79□□□□□ -0.36
FDPS-215ENST00000490140 EXOC4Q96A65 974 aa12.79□□□□□ -0.36
FDPS-215ENST00000490140 CALML4Q96GE6 196 aa12.79□□□□□ -0.36
FDPS-215ENST00000490140 ZSWIM3Q96MP5 696 aa12.79□□□□□ -0.36
FDPS-215ENST00000490140 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.79□□□□□ -0.36
FDPS-215ENST00000490140 SFI1A8K8P3 1242 aa12.78□□□□□ -0.36
FDPS-215ENST00000490140 K7ENM7 598 aa12.78□□□□□ -0.36
FDPS-215ENST00000490140 OGTO15294 1046 aa12.78□□□□□ -0.36
FDPS-215ENST00000490140 TBCAO75347 108 aaKnown RBP12.78□□□□□ -0.36
FDPS-215ENST00000490140 FAM13AO94988 1023 aa12.78□□□□□ -0.36
FDPS-215ENST00000490140 PLA2G4BP0C869 781 aa12.78□□□□□ -0.36
FDPS-215ENST00000490140 CHRNB1P11230 501 aa12.78□□□□□ -0.36
FDPS-215ENST00000490140 TDGF1P13385 188 aa12.78□□□□□ -0.36
FDPS-215ENST00000490140 TOB1P50616 345 aaPredicted RBP12.78□□□□□ -0.36
FDPS-215ENST00000490140 SLC12A3P55017 1021 aa12.78□□□□□ -0.36
FDPS-215ENST00000490140 NCKAP1LP55160 1127 aa12.78□□□□□ -0.36
FDPS-215ENST00000490140 AMPD2Q01433 879 aa12.78□□□□□ -0.36
FDPS-215ENST00000490140 DUSP4Q13115 394 aa12.78□□□□□ -0.36
FDPS-215ENST00000490140 LONP2Q86WA8 852 aa12.78□□□□□ -0.36
FDPS-215ENST00000490140 METTL23Q86XA0 190 aa12.78□□□□□ -0.36
FDPS-215ENST00000490140 RASSF8Q8NHQ8 419 aa12.78□□□□□ -0.36
FDPS-215ENST00000490140 C2orf15Q8WU43 125 aaKnown RBP12.78□□□□□ -0.36
FDPS-215ENST00000490140 ZBTB45Q96K62 511 aaPredicted RBP12.78□□□□□ -0.36
FDPS-215ENST00000490140 PGLYRP2Q96PD5 576 aa12.78□□□□□ -0.36
FDPS-215ENST00000490140 DERAQ9Y315 318 aa12.78□□□□□ -0.36
FDPS-215ENST00000490140 MYBPHLA2RUH7 354 aa12.77□□□□□ -0.37
FDPS-215ENST00000490140 MTMR11A4FU01 709 aa12.77□□□□□ -0.37
FDPS-215ENST00000490140 VWA3AA6NCI4 1184 aa12.77□□□□□ -0.37
FDPS-215ENST00000490140 SHISA7A6NL88 538 aa12.77□□□□□ -0.37
FDPS-215ENST00000490140 SLC38A8A6NNN8 435 aa12.77□□□□□ -0.37
FDPS-215ENST00000490140 SPECC1L-ADORA2AF8WAN1 911 aa12.77□□□□□ -0.37
FDPS-215ENST00000490140 H3BQV1 296 aa12.77□□□□□ -0.37
FDPS-215ENST00000490140 ARNTLO00327 626 aa12.77□□□□□ -0.37
FDPS-215ENST00000490140 MOSPD3O75425 235 aa12.77□□□□□ -0.37
FDPS-215ENST00000490140 BMP15O95972 392 aa12.77□□□□□ -0.37
FDPS-215ENST00000490140 PIGRP01833 764 aa12.77□□□□□ -0.37
FDPS-215ENST00000490140 KRT18P05783 430 aaKnown RBP12.77□□□□□ -0.37
FDPS-215ENST00000490140 GJA1P17302 382 aa12.77□□□□□ -0.37
FDPS-215ENST00000490140 WEE1P30291 646 aa12.77□□□□□ -0.37
FDPS-215ENST00000490140 CDC25AP30304 524 aa12.77□□□□□ -0.37
FDPS-215ENST00000490140 CTHP32929 405 aa12.77□□□□□ -0.37
FDPS-215ENST00000490140 TMEM132DQ14C87 1099 aa12.77□□□□□ -0.37
FDPS-215ENST00000490140 SEZ6Q53EL9 994 aa12.77□□□□□ -0.37
FDPS-215ENST00000490140 CENPPQ6IPU0 288 aa12.77□□□□□ -0.37
FDPS-215ENST00000490140 CEP68Q76N32 757 aa12.77□□□□□ -0.37
FDPS-215ENST00000490140 KCNK18Q7Z418 384 aa12.77□□□□□ -0.37
FDPS-215ENST00000490140 TMC8Q8IU68 726 aa12.77□□□□□ -0.37
FDPS-215ENST00000490140 ARID3BQ8IVW6 561 aaPredicted RBP12.77□□□□□ -0.37
FDPS-215ENST00000490140 THEM5Q8N1Q8 247 aa12.77□□□□□ -0.37
FDPS-215ENST00000490140 MMTAG2Q9BU76 263 aaKnown RBP12.77□□□□□ -0.37
FDPS-215ENST00000490140 MSTO1Q9BUK6 570 aa12.77□□□□□ -0.37
FDPS-215ENST00000490140 ATXN3LQ9H3M9 355 aa12.77□□□□□ -0.37
FDPS-215ENST00000490140 PARVGQ9HBI0 331 aa12.77□□□□□ -0.37
FDPS-215ENST00000490140 TBX20Q9UMR3 447 aa12.77□□□□□ -0.37
FDPS-215ENST00000490140 TIMM13Q9Y5L4 95 aaPredicted RBP12.77□□□□□ -0.37
FDPS-215ENST00000490140 LACTBL1A8MY62 500 aa12.76□□□□□ -0.37
FDPS-215ENST00000490140 SLC30A4O14863 429 aa12.76□□□□□ -0.37
FDPS-215ENST00000490140 ATG13O75143 517 aa12.76□□□□□ -0.37
FDPS-215ENST00000490140 OR4Q2P0C623 313 aa12.76□□□□□ -0.37
FDPS-215ENST00000490140 DDX6P26196 483 aaKnown RBP eCLIP12.76□□□□□ -0.37
FDPS-215ENST00000490140 GABRR2P28476 465 aa12.76□□□□□ -0.37
FDPS-215ENST00000490140 HOXA6P31267 233 aa12.76□□□□□ -0.37
FDPS-215ENST00000490140 UBA7P41226 1012 aa12.76□□□□□ -0.37
FDPS-215ENST00000490140 MCM2P49736 904 aa12.76□□□□□ -0.37
FDPS-215ENST00000490140 LILRA4P59901 499 aa12.76□□□□□ -0.37
FDPS-215ENST00000490140 SATB1Q01826 763 aa12.76□□□□□ -0.37
FDPS-215ENST00000490140 SPEM2Q0P670 501 aa12.76□□□□□ -0.37
FDPS-215ENST00000490140 ZBTB6Q15916 424 aa12.76□□□□□ -0.37
FDPS-215ENST00000490140 ENOX2Q16206 610 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms