RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 DYTNA2CJ06 578 aa9.25□□□□□ -0.93
LSAMP-205ENST00000490035 EIF2S1P05198 315 aaKnown RBP9.25□□□□□ -0.93
LSAMP-205ENST00000490035 TP53BP2Q13625 1128 aa9.25□□□□□ -0.93
LSAMP-205ENST00000490035 CYLC2Q14093 348 aaPredicted RBP9.25□□□□□ -0.93
LSAMP-205ENST00000490035 PDK2Q15119 407 aa9.25□□□□□ -0.93
LSAMP-205ENST00000490035 ZBTB41Q5SVQ8 909 aa9.25□□□□□ -0.93
LSAMP-205ENST00000490035 ABHD8Q96I13 439 aa9.25□□□□□ -0.93
LSAMP-205ENST00000490035 AIFM3Q96NN9 605 aa9.25□□□□□ -0.93
LSAMP-205ENST00000490035 TIMM44O43615 452 aa9.25□□□□□ -0.93
LSAMP-205ENST00000490035 TKTP29401 623 aaKnown RBP9.25□□□□□ -0.93
LSAMP-205ENST00000490035 PLA2G4AP47712 749 aa9.25□□□□□ -0.93
LSAMP-205ENST00000490035 GUCY1A3Q02108 690 aa9.25□□□□□ -0.93
LSAMP-205ENST00000490035 EME1Q96AY2 570 aa9.25□□□□□ -0.93
LSAMP-205ENST00000490035 PRMT1Q99873 361 aaKnown RBP9.25□□□□□ -0.93
LSAMP-205ENST00000490035 PDP2Q9P2J9 529 aa9.25□□□□□ -0.93
LSAMP-205ENST00000490035 ITM2BQ9Y287 266 aa9.25□□□□□ -0.93
LSAMP-205ENST00000490035 STARD13Q9Y3M8 1113 aa9.25□□□□□ -0.93
LSAMP-205ENST00000490035 A0A0A6YYK5 440 aaPredicted RBP9.25□□□□□ -0.93
LSAMP-205ENST00000490035 CES2O00748 559 aa9.25□□□□□ -0.93
LSAMP-205ENST00000490035 FCGR1AP12314 374 aa9.25□□□□□ -0.93
LSAMP-205ENST00000490035 FOXO4P98177 505 aa9.25□□□□□ -0.93
LSAMP-205ENST00000490035 CYTH1Q15438 398 aa9.25□□□□□ -0.93
LSAMP-205ENST00000490035 DCP1BQ8IZD4 617 aaKnown RBP9.25□□□□□ -0.93
LSAMP-205ENST00000490035 CASS4Q9NQ75 786 aa9.25□□□□□ -0.93
LSAMP-205ENST00000490035 TTC7AQ9ULT0 858 aaPredicted RBP9.25□□□□□ -0.93
LSAMP-205ENST00000490035 CD163L1Q9NR16 1453 aa9.25□□□□□ -0.93
LSAMP-205ENST00000490035 INO80Q9ULG1 1556 aaPredicted RBP9.25□□□□□ -0.93
LSAMP-205ENST00000490035 GRIK1P39086 918 aa9.25□□□□□ -0.93
LSAMP-205ENST00000490035 KPNA1P52294 538 aaPredicted RBP9.25□□□□□ -0.93
LSAMP-205ENST00000490035 NOTUMQ6P988 496 aa9.25□□□□□ -0.93
LSAMP-205ENST00000490035 C19orf60Q96EN9 201 aa9.25□□□□□ -0.93
LSAMP-205ENST00000490035 MAGED2Q9UNF1 606 aaPredicted RBP9.25□□□□□ -0.93
LSAMP-205ENST00000490035 PKN2Q16513 984 aaKnown RBP9.25□□□□□ -0.93
LSAMP-205ENST00000490035 SYTL3Q4VX76 610 aa9.25□□□□□ -0.93
LSAMP-205ENST00000490035 ZNF394Q53GI3 561 aa9.25□□□□□ -0.93
LSAMP-205ENST00000490035 CDR2LQ86X02 465 aaPredicted RBP9.25□□□□□ -0.93
LSAMP-205ENST00000490035 SHCBP1Q8NEM2 672 aa9.25□□□□□ -0.93
LSAMP-205ENST00000490035 DDX17Q92841 729 aaKnown RBP9.25□□□□□ -0.93
LSAMP-205ENST00000490035 RAVER2Q9HCJ3 691 aaKnown RBP9.25□□□□□ -0.93
LSAMP-205ENST00000490035 DFFAO00273 331 aa9.25□□□□□ -0.93
LSAMP-205ENST00000490035 SRGAP2O75044 1071 aa9.25□□□□□ -0.93
LSAMP-205ENST00000490035 GH1P01241 217 aa9.25□□□□□ -0.93
LSAMP-205ENST00000490035 MAPK1P28482 360 aa9.25□□□□□ -0.93
LSAMP-205ENST00000490035 CPT1AP50416 773 aa9.25□□□□□ -0.93
LSAMP-205ENST00000490035 SLC26A2P50443 739 aa9.25□□□□□ -0.93
LSAMP-205ENST00000490035 ARHGEF7Q14155 803 aa9.25□□□□□ -0.93
LSAMP-205ENST00000490035 DMC1Q14565 340 aa9.25□□□□□ -0.93
LSAMP-205ENST00000490035 BTNL9Q6UXG8 535 aa9.25□□□□□ -0.93
LSAMP-205ENST00000490035 LDHDQ86WU2 507 aa9.25□□□□□ -0.93
LSAMP-205ENST00000490035 YAF2Q8IY57 180 aa9.25□□□□□ -0.93
LSAMP-205ENST00000490035 RAB6BQ9NRW1 208 aa9.25□□□□□ -0.93
LSAMP-205ENST00000490035 AMACRQ9UHK6 382 aa9.25□□□□□ -0.93
LSAMP-205ENST00000490035 DSEQ9UL01 958 aa9.25□□□□□ -0.93
LSAMP-205ENST00000490035 SLC30A1Q9Y6M5 507 aa9.25□□□□□ -0.93
LSAMP-205ENST00000490035 F9P00740 461 aa9.24□□□□□ -0.93
LSAMP-205ENST00000490035 CCDC159P0C7I6 412 aa9.24□□□□□ -0.93
LSAMP-205ENST00000490035 PSMA4P25789 261 aaKnown RBP9.24□□□□□ -0.93
LSAMP-205ENST00000490035 SULT1E1P49888 294 aa9.24□□□□□ -0.93
LSAMP-205ENST00000490035 CUL3Q13618 768 aa9.24□□□□□ -0.93
LSAMP-205ENST00000490035 ADCK1Q86TW2 530 aa9.24□□□□□ -0.93
LSAMP-205ENST00000490035 ZNF473Q8WTR7 871 aaKnown RBP9.24□□□□□ -0.93
LSAMP-205ENST00000490035 NEURL4Q96JN8 1562 aa9.24□□□□□ -0.93
LSAMP-205ENST00000490035 SOX13Q9UN79 622 aa9.24□□□□□ -0.93
LSAMP-205ENST00000490035 CYP2D7A0A087X1C5 515 aa9.24□□□□□ -0.93
LSAMP-205ENST00000490035 PRPF4O43172 522 aaKnown RBP eCLIP9.24□□□□□ -0.93
LSAMP-205ENST00000490035 SOAT2O75908 522 aa9.24□□□□□ -0.93
LSAMP-205ENST00000490035 PRDX5P30044 214 aa9.24□□□□□ -0.93
LSAMP-205ENST00000490035 LSP1P33241 339 aa9.24□□□□□ -0.93
LSAMP-205ENST00000490035 ZNF135P52742 658 aaPredicted RBP9.24□□□□□ -0.93
LSAMP-205ENST00000490035 NUP107P57740 925 aa9.24□□□□□ -0.93
LSAMP-205ENST00000490035 RABGAP1LQ5R372 815 aa9.24□□□□□ -0.93
LSAMP-205ENST00000490035 SPATA18Q8TC71 538 aa9.24□□□□□ -0.93
LSAMP-205ENST00000490035 NSUN4Q96CB9 384 aaKnown RBP9.24□□□□□ -0.93
LSAMP-205ENST00000490035 PAIP2BQ9ULR5 123 aaKnown RBP9.24□□□□□ -0.93
LSAMP-205ENST00000490035 AP3M1Q9Y2T2 418 aa9.24□□□□□ -0.93
LSAMP-205ENST00000490035 RAD54BQ9Y620 910 aa9.24□□□□□ -0.93
LSAMP-205ENST00000490035 SERPINI2O75830 405 aa9.24□□□□□ -0.93
LSAMP-205ENST00000490035 CARSP49589 748 aaKnown RBP9.24□□□□□ -0.93
LSAMP-205ENST00000490035 HIST2H2ACQ16777 129 aaPredicted RBP9.24□□□□□ -0.93
LSAMP-205ENST00000490035 TJAP1Q5JTD0 557 aa9.24□□□□□ -0.93
LSAMP-205ENST00000490035 HIST2H2AA3Q6FI13 130 aa9.24□□□□□ -0.93
LSAMP-205ENST00000490035 WDR93Q6P2C0 686 aa9.24□□□□□ -0.93
LSAMP-205ENST00000490035 EEPD1Q7L9B9 569 aa9.24□□□□□ -0.93
LSAMP-205ENST00000490035 CLEC4FQ8N1N0 589 aa9.24□□□□□ -0.93
LSAMP-205ENST00000490035 ZNF280CQ8ND82 737 aa9.24□□□□□ -0.93
LSAMP-205ENST00000490035 CYFIP2Q96F07 1278 aa9.24□□□□□ -0.93
LSAMP-205ENST00000490035 CNBD2Q96M20 576 aa9.24□□□□□ -0.93
LSAMP-205ENST00000490035 TMEM245Q9H330 911 aa9.24□□□□□ -0.93
LSAMP-205ENST00000490035 RPAP3Q9H6T3 665 aaPredicted RBP9.24□□□□□ -0.93
LSAMP-205ENST00000490035 STRNO43815 780 aa9.24□□□□□ -0.93
LSAMP-205ENST00000490035 GEMIN4P57678 1058 aaKnown RBP9.24□□□□□ -0.93
LSAMP-205ENST00000490035 HPCAP84074 193 aa9.24□□□□□ -0.93
LSAMP-205ENST00000490035 PREPLQ4J6C6 727 aaPredicted RBP9.24□□□□□ -0.93
LSAMP-205ENST00000490035 SYNE4Q8N205 404 aa9.24□□□□□ -0.93
LSAMP-205ENST00000490035 PREX1Q8TCU6 1659 aa9.24□□□□□ -0.93
LSAMP-205ENST00000490035 TM9SF1O15321 606 aa9.24□□□□□ -0.93
LSAMP-205ENST00000490035 RASSF9O75901 435 aa9.24□□□□□ -0.93
LSAMP-205ENST00000490035 WDR47O94967 919 aa9.24□□□□□ -0.93
LSAMP-205ENST00000490035 SNUPNO95149 360 aaKnown RBP9.24□□□□□ -0.93
LSAMP-205ENST00000490035 ATP1A1P05023 1023 aaKnown RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms